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The map label for this gene is ybaE [H]

Identifier: 16763837

GI number: 16763837

Start: 512430

End: 514130

Strand: Reverse

Name: ybaE [H]

Synonym: STM0456

Alternate gene names: 16763837

Gene position: 514130-512430 (Counterclockwise)

Preceding gene: 16763839

Following gene: 16763836

Centisome position: 10.58

GC content: 56.26

Gene sequence:

>1701_bases
ATGAGGCTACTGAATCGGCTTAATCAATATCAACGCCTCTGGCAGCCTTCCGCCGGGGAAACGCAACATGTCACCGTTAG
CGAACTGGCCGAACGCTGTTTTTGTAGCGAGCGCCATCTGCGAACGCTGCTGCGTCAGGCCCAGCAGGCAGGTTGGCTAA
GATGGGAGGCGCAGTCCGGGCGCGGGAAACGTGGACGGCTCCAGTTTCTGGTCACGCCGGAATCGCTCCGCACCGCCATG
ATGGAACAGGCGCTGGAAAAAGGGCAGCAGCTCAACGTACTGGAACTGGCGCAGCTGGCGCCGGGCGAGTTACGGGCGAT
GCTCCAGCCTTTTATGGGCGGCCAATGGCAAAACGATACGCCGACATTGCGTATTCCCTACTATCGTCCGCTTGATCCGC
TGCAGCCGGGTTTCCTGCCAGGCCGCGCGGAACAGCATCTCGCAGGGCAAGTTTTTTCCGGGTTAACGCGCTTCGACCGC
GACAGTCAATATCCTTGCGGGGATTTGGCGCATCACTGGGAGGTTTCCGCCGACGGTTTACGCTGGGATTTTTATATTCG
CTCCACGCTGCACTGGCATAATGGCGATGCGGTGGATACCGCGCAGCTACACGAACGCCTGGAAAGGCTGCTTACCCTAC
CCGCGCTAAGCAAATTGTTTATTAGCGTCGCACGGATCGAAGTAACGCATCCTCAGTGCCTGACCTTTCTCCTTCACCGA
CCTGATTACTGGCTGGCGCATCGTCTGGCGAGCTATTGTAGCGGTCTGGCGCATCCTGACCTGCCGCTTATCGGCACCGG
TCCTTTTCGCCTGGCGTTGTTCACGCCGGAACTGGTGCGTCTGGAAAGTCATGACCATTATCACCTCAGCCATCCGCTGC
TGAAAGCGATTGAATTCTGGATCACCCCGCAACTGTTTGCCCAGGATCTGGGCACCAGTTGCCGCCATCCGGTGCAGATT
GCCATCGGCAAACCGGAAGAGCTGGCGACGCTGAGTCAGGTAAGTAGTGGTATCAGTCTTGGCTTTTGTTATTTAACCCT
CAAAAAGGGCTCACGGCTCAACGTACAGCAGGCGCGGCGTCTGATACATATTATCCATCATACTTCGCTGCTGAAAACCT
TACCGGTAGATGAGAACTTGATTATGCCAAGTCAGGGGCTGCTACCCGGCTGGACAATCCCGCAATGGCAGGACGTTGAT
GAAACGCCATTGCCGAAAAAACTTACCCTGGCGTATCACCTTCCCGTAGAGCTGCATACGATGGCGGAACAGCTTCGACA
TTACCTGGCGACGCTCGGCTGTGAGTTAACGTTGATTTTTCATAATGCCAAAAACTGGGATAACTGCCCTGCGTTGGCGC
AAGCGGATCTGATGATGGGCGACAGGCTGATCGGCGAAGCGCCGGAATATACGCTGGAGCAGTGGCTACGTTGCGATCAG
ATCTGGTCACATGTCCTGGACGCGCCTGCGTTTTCCCATCTGCAGGCTACGCTTGACGCTCTGCAAATTCAGCCCAATGA
AAAAGATCGCCGCGCCGCGCTACAACAAGTTTTTGCTAACCTGATGGATGACGCCACACTTACGCCACTATTTAATTATC
ACTATCGCATCAGCGCCCCACCGGGCGTTAACGGCGTTCGACTCACCCCTCGCGGCTGGTTTGAATTTAGCGAAGCCTGG
CTTCCGCCGCCTTCGCCGTGA

Upstream 100 bases:

>100_bases
CTCTTTCTCCACACTGTGACGCGGTTAACTTGTTGTTCAGTATTACCTGAGATATACGGAAGTAATAGTGAACAGATAAA
AGGAAGTGTTCCGGGTTTCT

Downstream 100 bases:

>100_bases
AGAAGCTGGTCGGGATTATCCGTACGCGTTACCATATTGGCTTTCGTCATTGATCAGGATAACTATGAAACGCGCCGTTG
TTGTATTTAGTGGAGGTCAG

Product: ABC transporter periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MRLLNRLNQYQRLWQPSAGETQHVTVSELAERCFCSERHLRTLLRQAQQAGWLRWEAQSGRGKRGRLQFLVTPESLRTAM
MEQALEKGQQLNVLELAQLAPGELRAMLQPFMGGQWQNDTPTLRIPYYRPLDPLQPGFLPGRAEQHLAGQVFSGLTRFDR
DSQYPCGDLAHHWEVSADGLRWDFYIRSTLHWHNGDAVDTAQLHERLERLLTLPALSKLFISVARIEVTHPQCLTFLLHR
PDYWLAHRLASYCSGLAHPDLPLIGTGPFRLALFTPELVRLESHDHYHLSHPLLKAIEFWITPQLFAQDLGTSCRHPVQI
AIGKPEELATLSQVSSGISLGFCYLTLKKGSRLNVQQARRLIHIIHHTSLLKTLPVDENLIMPSQGLLPGWTIPQWQDVD
ETPLPKKLTLAYHLPVELHTMAEQLRHYLATLGCELTLIFHNAKNWDNCPALAQADLMMGDRLIGEAPEYTLEQWLRCDQ
IWSHVLDAPAFSHLQATLDALQIQPNEKDRRAALQQVFANLMDDATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFSEAW
LPPPSP

Sequences:

>Translated_566_residues
MRLLNRLNQYQRLWQPSAGETQHVTVSELAERCFCSERHLRTLLRQAQQAGWLRWEAQSGRGKRGRLQFLVTPESLRTAM
MEQALEKGQQLNVLELAQLAPGELRAMLQPFMGGQWQNDTPTLRIPYYRPLDPLQPGFLPGRAEQHLAGQVFSGLTRFDR
DSQYPCGDLAHHWEVSADGLRWDFYIRSTLHWHNGDAVDTAQLHERLERLLTLPALSKLFISVARIEVTHPQCLTFLLHR
PDYWLAHRLASYCSGLAHPDLPLIGTGPFRLALFTPELVRLESHDHYHLSHPLLKAIEFWITPQLFAQDLGTSCRHPVQI
AIGKPEELATLSQVSSGISLGFCYLTLKKGSRLNVQQARRLIHIIHHTSLLKTLPVDENLIMPSQGLLPGWTIPQWQDVD
ETPLPKKLTLAYHLPVELHTMAEQLRHYLATLGCELTLIFHNAKNWDNCPALAQADLMMGDRLIGEAPEYTLEQWLRCDQ
IWSHVLDAPAFSHLQATLDALQIQPNEKDRRAALQQVFANLMDDATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFSEAW
LPPPSP
>Mature_566_residues
MRLLNRLNQYQRLWQPSAGETQHVTVSELAERCFCSERHLRTLLRQAQQAGWLRWEAQSGRGKRGRLQFLVTPESLRTAM
MEQALEKGQQLNVLELAQLAPGELRAMLQPFMGGQWQNDTPTLRIPYYRPLDPLQPGFLPGRAEQHLAGQVFSGLTRFDR
DSQYPCGDLAHHWEVSADGLRWDFYIRSTLHWHNGDAVDTAQLHERLERLLTLPALSKLFISVARIEVTHPQCLTFLLHR
PDYWLAHRLASYCSGLAHPDLPLIGTGPFRLALFTPELVRLESHDHYHLSHPLLKAIEFWITPQLFAQDLGTSCRHPVQI
AIGKPEELATLSQVSSGISLGFCYLTLKKGSRLNVQQARRLIHIIHHTSLLKTLPVDENLIMPSQGLLPGWTIPQWQDVD
ETPLPKKLTLAYHLPVELHTMAEQLRHYLATLGCELTLIFHNAKNWDNCPALAQADLMMGDRLIGEAPEYTLEQWLRCDQ
IWSHVLDAPAFSHLQATLDALQIQPNEKDRRAALQQVFANLMDDATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFSEAW
LPPPSP

Specific function: Unknown

COG id: COG4533

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786650, Length=565, Percent_Identity=79.4690265486726, Blast_Score=922, Evalue=0.0,
Organism=Escherichia coli, GI1786256, Length=580, Percent_Identity=27.4137931034483, Blast_Score=195, Evalue=5e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 64614; Mature: 64614

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLNRLNQYQRLWQPSAGETQHVTVSELAERCFCSERHLRTLLRQAQQAGWLRWEAQSG
CHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCC
RGKRGRLQFLVTPESLRTAMMEQALEKGQQLNVLELAQLAPGELRAMLQPFMGGQWQNDT
CCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCC
PTLRIPYYRPLDPLQPGFLPGRAEQHLAGQVFSGLTRFDRDSQYPCGDLAHHWEVSADGL
CEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCE
RWDFYIRSTLHWHNGDAVDTAQLHERLERLLTLPALSKLFISVARIEVTHPQCLTFLLHR
EEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHC
PDYWLAHRLASYCSGLAHPDLPLIGTGPFRLALFTPELVRLESHDHYHLSHPLLKAIEFW
CCHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEECHHHHEECCCCCEEHHHHHHHHHHHH
ITPQLFAQDLGTSCRHPVQIAIGKPEELATLSQVSSGISLGFCYLTLKKGSRLNVQQARR
CCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHH
LIHIIHHTSLLKTLPVDENLIMPSQGLLPGWTIPQWQDVDETPLPKKLTLAYHLPVELHT
HHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHH
MAEQLRHYLATLGCELTLIFHNAKNWDNCPALAQADLMMGDRLIGEAPEYTLEQWLRCDQ
HHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHH
IWSHVLDAPAFSHLQATLDALQIQPNEKDRRAALQQVFANLMDDATLTPLFNYHYRISAP
HHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCEEEECC
PGVNGVRLTPRGWFEFSEAWLPPPSP
CCCCCEEECCCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MRLLNRLNQYQRLWQPSAGETQHVTVSELAERCFCSERHLRTLLRQAQQAGWLRWEAQSG
CHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCC
RGKRGRLQFLVTPESLRTAMMEQALEKGQQLNVLELAQLAPGELRAMLQPFMGGQWQNDT
CCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCC
PTLRIPYYRPLDPLQPGFLPGRAEQHLAGQVFSGLTRFDRDSQYPCGDLAHHWEVSADGL
CEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCE
RWDFYIRSTLHWHNGDAVDTAQLHERLERLLTLPALSKLFISVARIEVTHPQCLTFLLHR
EEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHC
PDYWLAHRLASYCSGLAHPDLPLIGTGPFRLALFTPELVRLESHDHYHLSHPLLKAIEFW
CCHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEECHHHHEECCCCCEEHHHHHHHHHHHH
ITPQLFAQDLGTSCRHPVQIAIGKPEELATLSQVSSGISLGFCYLTLKKGSRLNVQQARR
CCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHH
LIHIIHHTSLLKTLPVDENLIMPSQGLLPGWTIPQWQDVDETPLPKKLTLAYHLPVELHT
HHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHH
MAEQLRHYLATLGCELTLIFHNAKNWDNCPALAQADLMMGDRLIGEAPEYTLEQWLRCDQ
HHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHH
IWSHVLDAPAFSHLQATLDALQIQPNEKDRRAALQQVFANLMDDATLTPLFNYHYRISAP
HHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCEEEECC
PGVNGVRLTPRGWFEFSEAWLPPPSP
CCCCCEEECCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]