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The map label for this gene is yahN [H]

Identifier: 16763745

GI number: 16763745

Start: 414812

End: 415444

Strand: Reverse

Name: yahN [H]

Synonym: STM0365

Alternate gene names: 16763745

Gene position: 415444-414812 (Counterclockwise)

Preceding gene: 16763747

Following gene: 39546294

Centisome position: 8.55

GC content: 54.19

Gene sequence:

>633_bases
ATGGAGCCGTTTCATGCCGTTGTGCTTACCGTCAGTCTGTTTGTGTTAACCTTTTTTAATCCCGGCGCGAATCTGTTTGT
GGTGGTGCAAACCAGCCTCGCATCAGGACGCCGGGCGGGAGTCATCACCGGCCTGGGCGTCGCCACGGGAGACGCCTTTT
ATTCCGGGCTGGGGCTTTTCGGTCTGGCGACGCTCATTACGCAATGCGAAGCGGTATTTTCTCTTATCAAAATTGTCGGC
GGCGCCTATTTATTATGGTTCGCCTGGAACAGTATTCGCCACCAGGCGACGCCGCAAATGAGCACGCTCCAGACGCCGAT
TGCCGCCCCGTGGACAATTTTCTTTCGCCGGGGATTAATGACCGATTTATCCAATCCGCAAACCGTACTGTTTTTTATCA
GTATTTTTTCCGTAACGCTTAGCGCAGAAACGCCCACATGGGCAAGGTTAATGGCCTGGGCCGGAATTGTGCTGTCATCC
GTTATCTGGCGTATTTTTCTCAGCCAGGCCTTTTCGCTCCCCGCAGTCCGCCGCGCTTATGGACGAATACAGCGCATTGC
CAGCCGTGTTATCGGCGCCATTATCGGGATGTTTGCGCTCAGACTTCTCTATGAAGGCGTGACGCACCGCTAA

Upstream 100 bases:

>100_bases
CGGATTAAAACGCCCCTGCTTTGTGATCTCACTCGCAATCATCTGGTTTGACTATTAATAAGATGAACGTTATTTCTTGA
GGCTATGGGAAGAGTTGTCT

Downstream 100 bases:

>100_bases
TGTTTGTCCGGTAGCCTTTGCTACCGGACGATAAGCGTTATCAAAACGCCCATGACACGCTGCCTACAATGCTACGCTCG
GCGCCAAAATAACAATAAGA

Product: transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MEPFHAVVLTVSLFVLTFFNPGANLFVVVQTSLASGRRAGVITGLGVATGDAFYSGLGLFGLATLITQCEAVFSLIKIVG
GAYLLWFAWNSIRHQATPQMSTLQTPIAAPWTIFFRRGLMTDLSNPQTVLFFISIFSVTLSAETPTWARLMAWAGIVLSS
VIWRIFLSQAFSLPAVRRAYGRIQRIASRVIGAIIGMFALRLLYEGVTHR

Sequences:

>Translated_210_residues
MEPFHAVVLTVSLFVLTFFNPGANLFVVVQTSLASGRRAGVITGLGVATGDAFYSGLGLFGLATLITQCEAVFSLIKIVG
GAYLLWFAWNSIRHQATPQMSTLQTPIAAPWTIFFRRGLMTDLSNPQTVLFFISIFSVTLSAETPTWARLMAWAGIVLSS
VIWRIFLSQAFSLPAVRRAYGRIQRIASRVIGAIIGMFALRLLYEGVTHR
>Mature_210_residues
MEPFHAVVLTVSLFVLTFFNPGANLFVVVQTSLASGRRAGVITGLGVATGDAFYSGLGLFGLATLITQCEAVFSLIKIVG
GAYLLWFAWNSIRHQATPQMSTLQTPIAAPWTIFFRRGLMTDLSNPQTVLFFISIFSVTLSAETPTWARLMAWAGIVLSS
VIWRIFLSQAFSLPAVRRAYGRIQRIASRVIGAIIGMFALRLLYEGVTHR

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1786522, Length=210, Percent_Identity=86.6666666666667, Blast_Score=374, Evalue=1e-105,
Organism=Escherichia coli, GI48994978, Length=198, Percent_Identity=28.2828282828283, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1788099, Length=186, Percent_Identity=26.3440860215054, Blast_Score=67, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 23034; Mature: 23034

Theoretical pI: Translated: 11.77; Mature: 11.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPFHAVVLTVSLFVLTFFNPGANLFVVVQTSLASGRRAGVITGLGVATGDAFYSGLGLF
CCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEECCHHHHHHHHHHHHHH
GLATLITQCEAVFSLIKIVGGAYLLWFAWNSIRHQATPQMSTLQTPIAAPWTIFFRRGLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHH
TDLSNPQTVLFFISIFSVTLSAETPTWARLMAWAGIVLSSVIWRIFLSQAFSLPAVRRAY
HCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
GRIQRIASRVIGAIIGMFALRLLYEGVTHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEPFHAVVLTVSLFVLTFFNPGANLFVVVQTSLASGRRAGVITGLGVATGDAFYSGLGLF
CCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEECCHHHHHHHHHHHHHH
GLATLITQCEAVFSLIKIVGGAYLLWFAWNSIRHQATPQMSTLQTPIAAPWTIFFRRGLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHH
TDLSNPQTVLFFISIFSVTLSAETPTWARLMAWAGIVLSSVIWRIFLSQAFSLPAVRRAY
HCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
GRIQRIASRVIGAIIGMFALRLLYEGVTHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]