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The map label for this gene is insF1 [H]

Identifier: 16763706

GI number: 16763706

Start: 369197

End: 369997

Strand: Reverse

Name: insF1 [H]

Synonym: STM0325

Alternate gene names: 16763706

Gene position: 369997-369197 (Counterclockwise)

Preceding gene: 16763714

Following gene: 16763702

Centisome position: 7.62

GC content: 54.43

Gene sequence:

>801_bases
ATGTTGGCTTCCACACCACCGACTTCAACTGGGGTATTTAACCGGGCGCTTAGCTCGCTGGCGATAGCCTGCATCTGTAA
GCGGTACGTCTGGCATCAGCGTCGTCATCAGATAAACCGGCGTCAGCGGTTCCACCTTGTCTGTGATAACGTCTTCCGGG
AAGCATTCAGTGACGCAAAACAACGCTATGGTGCGCCACGCCTGACGGATGAGCTTCGTGCTCAGGGTTACCAGTTCAAC
GTGAAAACCGTGGCGGCCAGCCTGCGTCGGCAGGGGCTGCGGGCGAAAGCCTCGCGCCGGTTCCGTCCGGTCAGTTACCG
CAAACATGGTCTGCCAGTCTCAGAGAATCTGCTGAAGCAGGACTTTTACGCCAGCGGCCCGAATCAGAAGTGGGTGGGTG
ACATCACGTATCTTCGCACTGGTGAAGGCTGGCTTTATCTGGCCGTGGTTATCGATCTGTGGTCGCGGTCAGTCATTGGC
TGGTCGATGTCTTCGCGGATGACAGCACAGCTTGCCTGCGATGCGTTACAGATGGCGCTGTGGCGGCGTAAATGTCCGGA
AAATGTCATCGTGCATACAGACAGAGGCGGTCAGTACTGTTCAACGGATTATCAGAGCTTACTGAAACGCCATAATCTGC
GGGGAAGTATGAGCGCCAGAGGTTGTTGTTACGACAATGCCTGTGCGGAAAGCTTCTTCCATACGCTGAAGGTGGAATGT
ATCCACGGAGAGGACTTTGTCAGCCGGGAAATAATGCGGACAGCAGTGTTTAATTATAGTGAGTGTGATTACAATCGGTA
G

Upstream 100 bases:

>100_bases
ATCGTTATTGATAATGGCGGCATCGGTGGATCCTGCGCCTAAATCGAGGATCGCCAGCGGAGCGTCGCATCCAGGCGTCG
TTAACGCGCCAGCCACAGCC

Downstream 100 bases:

>100_bases
CGTCGTCACAGTGCCTGTGGCGGTCTCAGTCCGGAACAATTTGAAAACCAGAACCTCGCTTAGGGTTGTGCCCATATTAC
GCGGGTAGGATCAGAGTACA

Product: IS3 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MLASTPPTSTGVFNRALSSLAIACICKRYVWHQRRHQINRRQRFHLVCDNVFREAFSDAKQRYGAPRLTDELRAQGYQFN
VKTVAASLRRQGLRAKASRRFRPVSYRKHGLPVSENLLKQDFYASGPNQKWVGDITYLRTGEGWLYLAVVIDLWSRSVIG
WSMSSRMTAQLACDALQMALWRRKCPENVIVHTDRGGQYCSTDYQSLLKRHNLRGSMSARGCCYDNACAESFFHTLKVEC
IHGEDFVSREIMRTAVFNYSECDYNR

Sequences:

>Translated_266_residues
MLASTPPTSTGVFNRALSSLAIACICKRYVWHQRRHQINRRQRFHLVCDNVFREAFSDAKQRYGAPRLTDELRAQGYQFN
VKTVAASLRRQGLRAKASRRFRPVSYRKHGLPVSENLLKQDFYASGPNQKWVGDITYLRTGEGWLYLAVVIDLWSRSVIG
WSMSSRMTAQLACDALQMALWRRKCPENVIVHTDRGGQYCSTDYQSLLKRHNLRGSMSARGCCYDNACAESFFHTLKVEC
IHGEDFVSREIMRTAVFNYSECDYNR
>Mature_266_residues
MLASTPPTSTGVFNRALSSLAIACICKRYVWHQRRHQINRRQRFHLVCDNVFREAFSDAKQRYGAPRLTDELRAQGYQFN
VKTVAASLRRQGLRAKASRRFRPVSYRKHGLPVSENLLKQDFYASGPNQKWVGDITYLRTGEGWLYLAVVIDLWSRSVIG
WSMSSRMTAQLACDALQMALWRRKCPENVIVHTDRGGQYCSTDYQSLLKRHNLRGSMSARGCCYDNACAESFFHTLKVEC
IHGEDFVSREIMRTAVFNYSECDYNR

Specific function: Involved in the transposition of the insertion sequence IS3 [H]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=191, Percent_Identity=37.17277486911, Blast_Score=141, Evalue=6e-34,
Organism=Escherichia coli, GI1788405, Length=238, Percent_Identity=83.6134453781513, Blast_Score=419, Evalue=1e-118,
Organism=Escherichia coli, GI1787263, Length=238, Percent_Identity=83.6134453781513, Blast_Score=419, Evalue=1e-118,
Organism=Escherichia coli, GI1786753, Length=238, Percent_Identity=83.6134453781513, Blast_Score=419, Evalue=1e-118,
Organism=Escherichia coli, GI1786570, Length=238, Percent_Identity=83.6134453781513, Blast_Score=419, Evalue=1e-118,
Organism=Escherichia coli, GI1786490, Length=238, Percent_Identity=83.6134453781513, Blast_Score=419, Evalue=1e-118,
Organism=Escherichia coli, GI1789981, Length=209, Percent_Identity=36.8421052631579, Blast_Score=135, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 30713; Mature: 30713

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLASTPPTSTGVFNRALSSLAIACICKRYVWHQRRHQINRRQRFHLVCDNVFREAFSDAK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRYGAPRLTDELRAQGYQFNVKTVAASLRRQGLRAKASRRFRPVSYRKHGLPVSENLLKQ
HHCCCCCCCHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHH
DFYASGPNQKWVGDITYLRTGEGWLYLAVVIDLWSRSVIGWSMSSRMTAQLACDALQMAL
HHHCCCCCCCEEECEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
WRRKCPENVIVHTDRGGQYCSTDYQSLLKRHNLRGSMSARGCCYDNACAESFFHTLKVEC
HHHCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEE
IHGEDFVSREIMRTAVFNYSECDYNR
ECCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLASTPPTSTGVFNRALSSLAIACICKRYVWHQRRHQINRRQRFHLVCDNVFREAFSDAK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRYGAPRLTDELRAQGYQFNVKTVAASLRRQGLRAKASRRFRPVSYRKHGLPVSENLLKQ
HHCCCCCCCHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHH
DFYASGPNQKWVGDITYLRTGEGWLYLAVVIDLWSRSVIGWSMSSRMTAQLACDALQMAL
HHHCCCCCCCEEECEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
WRRKCPENVIVHTDRGGQYCSTDYQSLLKRHNLRGSMSARGCCYDNACAESFFHTLKVEC
HHHCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEE
IHGEDFVSREIMRTAVFNYSECDYNR
ECCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2987844; 9278503 [H]