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The map label for this gene is speD [H]

Identifier: 16763555

GI number: 16763555

Start: 194201

End: 194995

Strand: Reverse

Name: speD [H]

Synonym: STM0165

Alternate gene names: 16763555

Gene position: 194995-194201 (Counterclockwise)

Preceding gene: 16763556

Following gene: 16763549

Centisome position: 4.01

GC content: 49.69

Gene sequence:

>795_bases
TTGAAAAAGCTGAAACTGCATGGCTTTAACAATCTGACGAAAAGCCTGAGTTTTTGTATTTACGATATCTGCTACGCCAA
AACCGCAGAAGAGCGCGATGGCTATATCGCCTATATCGATGAACTCTATAACGCCAACCGACTGACCGAGATCCTGTCGG
AGACCTGCTCCATTATCGGCGCAAACATCCTGAACATCGCCCGTCAGGATTATGAACCCCAGGGTGCCAGCGTCACGATT
CTGGTGAGCGAAGAGCCGATCGACCCGAAACTTATCGATCAAACCGAACATCCCGGCCCGCTGCCGGAAACCGTGGTGGC
GCACCTCGATAAGAGCCATATCTGCGTGCATACCTATCCGGAAAGCCATCCGGAAGGCGGGCTATGCACCTTTCGCGCCG
ACATCGAAGTGTCAACCTGCGGGGTGATTTCACCGCTAAAAGCGCTCAATTACCTGATCCACCAGCTAGAGTCCGATATC
GTCACCATCGATTACCGCGTGCGCGGCTTTACACGCGACGTCAACGGTATGAAGCACTTTATCGATCATGAGATTAATTC
TATTCAGAATTTTATGTCGGAAGATATGAAGTCGCTGTATGACATGGTGGATGTAAACGTGTATCAGGAAAATATTTTCC
ATACCAAGATGCTGCTTAAAGAGTTCGATCTTAAGCACTACATGTTTCACACCAAACCGGAAGATCTCACTGAAACCGAA
CGCCAGGAGATCACCGCCGCGCTGTGGAAAGAGATGCGCGAGATTTACTACGGCCGCAATATTTCTGCGGTCTGA

Upstream 100 bases:

>100_bases
GTCGCTATTACAACCCGGCTATTCATGCCGCTGCATTTGCGCTACCGCAATATCTACATGACGCACTGTCCGCACAGTGA
CGTTAAGGAGGTGATAAAAA

Downstream 100 bases:

>100_bases
TTCACCACTGGCAGCGCCTGACGGCGCTGTCACTCCGGCTGCACCAGCGTTAGCGCAAAAGCGCGCCCTTTCAGTTCAAC
CTGCGCTGACGGCGGCAGAT

Product: S-adenosylmethionine decarboxylase

Products: NA

Alternate protein names: AdoMetDC; SAMDC [H]

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYNANRLTEILSETCSIIGANILNIARQDYEPQGASVTI
LVSEEPIDPKLIDQTEHPGPLPETVVAHLDKSHICVHTYPESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDI
VTIDYRVRGFTRDVNGMKHFIDHEINSIQNFMSEDMKSLYDMVDVNVYQENIFHTKMLLKEFDLKHYMFHTKPEDLTETE
RQEITAALWKEMREIYYGRNISAV

Sequences:

>Translated_264_residues
MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYNANRLTEILSETCSIIGANILNIARQDYEPQGASVTI
LVSEEPIDPKLIDQTEHPGPLPETVVAHLDKSHICVHTYPESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDI
VTIDYRVRGFTRDVNGMKHFIDHEINSIQNFMSEDMKSLYDMVDVNVYQENIFHTKMLLKEFDLKHYMFHTKPEDLTETE
RQEITAALWKEMREIYYGRNISAV
>Mature_264_residues
MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYNANRLTEILSETCSIIGANILNIARQDYEPQGASVTI
LVSEEPIDPKLIDQTEHPGPLPETVVAHLDKSHICVHTYPESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDI
VTIDYRVRGFTRDVNGMKHFIDHEINSIQNFMSEDMKSLYDMVDVNVYQENIFHTKMLLKEFDLKHYMFHTKPEDLTETE
RQEITAALWKEMREIYYGRNISAV

Specific function: Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine [H]

COG id: COG1586

COG function: function code E; S-adenosylmethionine decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786311, Length=264, Percent_Identity=96.5909090909091, Blast_Score=540, Evalue=1e-155,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003826
- InterPro:   IPR009165
- InterPro:   IPR016067 [H]

Pfam domain/function: PF02675 AdoMet_dc [H]

EC number: =4.1.1.50 [H]

Molecular weight: Translated: 30415; Mature: 30415

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYNANRLTEILSETCSIIG
CCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCHHHHHHHHHHHHHHHH
ANILNIARQDYEPQGASVTILVSEEPIDPKLIDQTEHPGPLPETVVAHLDKSHICVHTYP
HHHHHHHHHCCCCCCCEEEEEEECCCCCCHHCCCCCCCCCCHHHHHHHCCCCCEEEECCC
ESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDIVTIDYRVRGFTRDVNGMKHF
CCCCCCCEEEEEECCEEECCCHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHH
IDHEINSIQNFMSEDMKSLYDMVDVNVYQENIFHTKMLLKEFDLKHYMFHTKPEDLTETE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHH
RQEITAALWKEMREIYYGRNISAV
HHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYNANRLTEILSETCSIIG
CCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCHHHHHHHHHHHHHHHH
ANILNIARQDYEPQGASVTILVSEEPIDPKLIDQTEHPGPLPETVVAHLDKSHICVHTYP
HHHHHHHHHCCCCCCCEEEEEEECCCCCCHHCCCCCCCCCCHHHHHHHCCCCCEEEECCC
ESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDIVTIDYRVRGFTRDVNGMKHF
CCCCCCCEEEEEECCEEECCCHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHH
IDHEINSIQNFMSEDMKSLYDMVDVNVYQENIFHTKMLLKEFDLKHYMFHTKPEDLTETE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHH
RQEITAALWKEMREIYYGRNISAV
HHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA