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The map label for this gene is murF [H]

Identifier: 16763514

GI number: 16763514

Start: 144963

End: 146321

Strand: Direct

Name: murF [H]

Synonym: STM0124

Alternate gene names: 16763514

Gene position: 144963-146321 (Clockwise)

Preceding gene: 16763513

Following gene: 16763515

Centisome position: 2.98

GC content: 56.36

Gene sequence:

>1359_bases
ATGATTAGCGTAACGCTCAGCAAAATTGCCGATGTCCTTGGCGCCGAACACCGCGGGGCGGATCTCACGCTCGATACGGT
CATTACCGACACACGGAAAGTGACGCCGGGATGCCTGTTCGTGGCGCTGAAAGGGGAACGCTTTGATGCGCATGATTTTG
CTGATAAAGCAAAAGCGAACGGCGCTGGCGCCCTGCTGGTCAGTCGTCCTCTGGATATCGATCTCCCGCAGGTGATTGTA
AAAGACACGCGTCAGGCATTTGGCCAACTGGCCGCCTGGGTACGTATGCAGGTACCGGCGCGGGTGGTGGCGTTAACCGG
TTCGTCCGGCAAAACCTCGGTCAAAGAGATGACCGCCGCGATTCTTAGCCAGTGCGGAAATACTCTGTATACCGCAGGCA
ATTTTAACAACGACATCGGCGTGCCGATAACGCTGCTGCGCTTAAACCATGATTATGACTATGCGGTAATCGAGTTAGGC
GCTAATCACCAGGGAGAAATCGCCTGGACCGTTAGCCTGACGCGCCCGGAAGCGGCGCTGGTCAATAACCTGGCGGCGGC
GCATCTGGAAGGCTTCGGCTCGTTGGCCGGCGTGGCGAAAGCGAAAGGCGAAATCTATACCGGTTTGCCTGAGAACGGTA
TCGCGATTATGAATGCCGATAATAATGACTGGCTGAACTGGCAAAGCATTATTGGCGATCGTCTGGTGTGGCGCTTTTCG
CCGAATGCGGCAAACAGCGACTTTACCGCTGCGAATATCCACGTGACGTCACACGGTACCGAATTTACCCTGCAAACGCC
GATGGGCAGCATTGATGTGCTGCTGCCGTTGCCGGGGCGGCACAATATTGCCAACGCGCTGGCGGCCGCTGCTTTATCAA
TGGCGGTGGGGGCTACGCTGACGGCGATTAAAGCAGGGCTGGCGGCGTTAAAAGCCGTACCCGGGCGTCTGTTCCCGATT
CAGCTAAGTGAAAACCAACTGGTACTGGATGACGCTTATAACGCCAACGTTGGTTCGATGACCGCCGCAGTGCAGGTCCT
TTCTGAAATGCCCGGCTACCGCGTGCTGGTGGTAGGCGATATGGCCGAGCTGGGCGCAGAAAGCGAAGCGTGCCACCTCC
AGGTTGGTGAGGCCGCAAAAGCGGCGGGTATTGATCGCGTGTTAAGCACCGGAAAACTCAGTCAGGCTATCAGCCACGCC
AGCGGCGTCGGCGAACATTTTGCCGATAAAGCCGCGCTCATTGCGCGTTTACACGCTCTGCTTCAGGAGCAACCAATGAT
GACTATTTTAGTGAAAGGATCACGCAGCGCCGCGATGGAAGATGTGGTTCATGCGTTACAGGAGAAAGGTTCATGTTAG

Upstream 100 bases:

>100_bases
TGATTGCAGGTAAAGGGCACGAGGATTACCAGATTGTCGGCACGCAGCGTCTTGATTATTCAGACCGCGTGACCGCAGCG
CGTTTGCTGGGGGTGATCGC

Downstream 100 bases:

>100_bases
TTTGGCTGGCCGAGCATTTGGTCAAATATTATTCCGGCTTTAACGTCTTTTCTTATCTGACGTTTCGCGCCATCGTCAGC
CTGTTGACCGCGCTGTTCAT

Product: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase

Products: NA

Alternate protein names: D-alanyl-D-alanine-adding enzyme; UDP-MurNAc-pentapeptide synthetase [H]

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MISVTLSKIADVLGAEHRGADLTLDTVITDTRKVTPGCLFVALKGERFDAHDFADKAKANGAGALLVSRPLDIDLPQVIV
KDTRQAFGQLAAWVRMQVPARVVALTGSSGKTSVKEMTAAILSQCGNTLYTAGNFNNDIGVPITLLRLNHDYDYAVIELG
ANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIYTGLPENGIAIMNADNNDWLNWQSIIGDRLVWRFS
PNAANSDFTAANIHVTSHGTEFTLQTPMGSIDVLLPLPGRHNIANALAAAALSMAVGATLTAIKAGLAALKAVPGRLFPI
QLSENQLVLDDAYNANVGSMTAAVQVLSEMPGYRVLVVGDMAELGAESEACHLQVGEAAKAAGIDRVLSTGKLSQAISHA
SGVGEHFADKAALIARLHALLQEQPMMTILVKGSRSAAMEDVVHALQEKGSC

Sequences:

>Translated_452_residues
MISVTLSKIADVLGAEHRGADLTLDTVITDTRKVTPGCLFVALKGERFDAHDFADKAKANGAGALLVSRPLDIDLPQVIV
KDTRQAFGQLAAWVRMQVPARVVALTGSSGKTSVKEMTAAILSQCGNTLYTAGNFNNDIGVPITLLRLNHDYDYAVIELG
ANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIYTGLPENGIAIMNADNNDWLNWQSIIGDRLVWRFS
PNAANSDFTAANIHVTSHGTEFTLQTPMGSIDVLLPLPGRHNIANALAAAALSMAVGATLTAIKAGLAALKAVPGRLFPI
QLSENQLVLDDAYNANVGSMTAAVQVLSEMPGYRVLVVGDMAELGAESEACHLQVGEAAKAAGIDRVLSTGKLSQAISHA
SGVGEHFADKAALIARLHALLQEQPMMTILVKGSRSAAMEDVVHALQEKGSC
>Mature_452_residues
MISVTLSKIADVLGAEHRGADLTLDTVITDTRKVTPGCLFVALKGERFDAHDFADKAKANGAGALLVSRPLDIDLPQVIV
KDTRQAFGQLAAWVRMQVPARVVALTGSSGKTSVKEMTAAILSQCGNTLYTAGNFNNDIGVPITLLRLNHDYDYAVIELG
ANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIYTGLPENGIAIMNADNNDWLNWQSIIGDRLVWRFS
PNAANSDFTAANIHVTSHGTEFTLQTPMGSIDVLLPLPGRHNIANALAAAALSMAVGATLTAIKAGLAALKAVPGRLFPI
QLSENQLVLDDAYNANVGSMTAAVQVLSEMPGYRVLVVGDMAELGAESEACHLQVGEAAKAAGIDRVLSTGKLSQAISHA
SGVGEHFADKAALIARLHALLQEQPMMTILVKGSRSAAMEDVVHALQEKGSC

Specific function: Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein [H]

COG id: COG0770

COG function: function code M; UDP-N-acetylmuramyl pentapeptide synthase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MurCDEF family [H]

Homologues:

Organism=Escherichia coli, GI1786274, Length=452, Percent_Identity=87.6106194690265, Blast_Score=776, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004101
- InterPro:   IPR013221
- InterPro:   IPR000713
- InterPro:   IPR005863 [H]

Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]

EC number: =6.3.2.10 [H]

Molecular weight: Translated: 47534; Mature: 47534

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISVTLSKIADVLGAEHRGADLTLDTVITDTRKVTPGCLFVALKGERFDAHDFADKAKAN
CEEEEHHHHHHHHCCCCCCCCEEEHHEECCCCCCCCCEEEEEEECCCCCCHHHHHHHCCC
GAGALLVSRPLDIDLPQVIVKDTRQAFGQLAAWVRMQVPARVVALTGSSGKTSVKEMTAA
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEECCCCCHHHHHHHHH
ILSQCGNTLYTAGNFNNDIGVPITLLRLNHDYDYAVIELGANHQGEIAWTVSLTRPEAAL
HHHHCCCEEEECCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEEEECCCHHHH
VNNLAAAHLEGFGSLAGVAKAKGEIYTGLPENGIAIMNADNNDWLNWQSIIGDRLVWRFS
HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCCCCHHHHHCCEEEEEEC
PNAANSDFTAANIHVTSHGTEFTLQTPMGSIDVLLPLPGRHNIANALAAAALSMAVGATL
CCCCCCCCEEEEEEEECCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
TAIKAGLAALKAVPGRLFPIQLSENQLVLDDAYNANVGSMTAAVQVLSEMPGYRVLVVGD
HHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEC
MAELGAESEACHLQVGEAAKAAGIDRVLSTGKLSQAISHASGVGEHFADKAALIARLHAL
HHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LQEQPMMTILVKGSRSAAMEDVVHALQEKGSC
HHCCCEEEEEEECCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MISVTLSKIADVLGAEHRGADLTLDTVITDTRKVTPGCLFVALKGERFDAHDFADKAKAN
CEEEEHHHHHHHHCCCCCCCCEEEHHEECCCCCCCCCEEEEEEECCCCCCHHHHHHHCCC
GAGALLVSRPLDIDLPQVIVKDTRQAFGQLAAWVRMQVPARVVALTGSSGKTSVKEMTAA
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEECCCCCHHHHHHHHH
ILSQCGNTLYTAGNFNNDIGVPITLLRLNHDYDYAVIELGANHQGEIAWTVSLTRPEAAL
HHHHCCCEEEECCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEEEECCCHHHH
VNNLAAAHLEGFGSLAGVAKAKGEIYTGLPENGIAIMNADNNDWLNWQSIIGDRLVWRFS
HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCCCCHHHHHCCEEEEEEC
PNAANSDFTAANIHVTSHGTEFTLQTPMGSIDVLLPLPGRHNIANALAAAALSMAVGATL
CCCCCCCCEEEEEEEECCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
TAIKAGLAALKAVPGRLFPIQLSENQLVLDDAYNANVGSMTAAVQVLSEMPGYRVLVVGD
HHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEC
MAELGAESEACHLQVGEAAKAAGIDRVLSTGKLSQAISHASGVGEHFADKAALIARLHAL
HHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LQEQPMMTILVKGSRSAAMEDVVHALQEKGSC
HHCCCEEEEEEECCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2668880; 8973200; 1630901; 9278503; 9166795; 2186811; 11090285 [H]