| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16763490
Identifier: 16763490
GI number: 16763490
Start: 116816
End: 117235
Strand: Direct
Name: 16763490
Synonym: STM0100
Alternate gene names: NA
Gene position: 116816-117235 (Clockwise)
Preceding gene: 16763484
Following gene: 16763494
Centisome position: 2.4
GC content: 42.62
Gene sequence:
>420_bases ATGAATGTGAGTATGCAGGCGCGTCTGGTAGGGAACGACCGTTATCTTTTCGTCAATACTCAACGCGCTAACCCTTCCAT AAAAACCGTGAGTCGATTTTTTGAGTATAAAACATGGACAGAACAGATTTGGCGTACCGAGATTATTGAAAACGGCAATG CTTTTTTTCACTGGCAAGGACACGACAGAAAAAACGGACATCGGGATACCATTATTAACTATCTGTTAAATGGGCAACGC TGGCAGTCAACAATCGAAGATTATATTTTCTTCCATGCGCTGGAAGGAAAAGCGTGGCAGGGACATTATGACAATATTAT TGAATATGTGAGTTCTGATCATTACGTCTATCAAAGCGCATTTGCTGAATATATCACCGACCAGATTCATCAACGCGCCC CCCATGGGACGCGTTTTTAG
Upstream 100 bases:
>100_bases TCTCTGCATAATTTAATTTTTATTTTAGAATATAATTTTATTTTGACTTTCGGGTGCGGGTGTTTTTATCAAAATTTGTG GTATTCGGGAATGATCTTTT
Downstream 100 bases:
>100_bases AGGCATTACTGCCCGTAATAGGCTTTTGCGCCGTGTTTGCGTAGATAGTGTTTATCCAGCAGGGATTGCTGCATGTCGGG CAACTGCGGCGCAAGCTGGC
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MNVSMQARLVGNDRYLFVNTQRANPSIKTVSRFFEYKTWTEQIWRTEIIENGNAFFHWQGHDRKNGHRDTIINYLLNGQR WQSTIEDYIFFHALEGKAWQGHYDNIIEYVSSDHYVYQSAFAEYITDQIHQRAPHGTRF
Sequences:
>Translated_139_residues MNVSMQARLVGNDRYLFVNTQRANPSIKTVSRFFEYKTWTEQIWRTEIIENGNAFFHWQGHDRKNGHRDTIINYLLNGQR WQSTIEDYIFFHALEGKAWQGHYDNIIEYVSSDHYVYQSAFAEYITDQIHQRAPHGTRF >Mature_139_residues MNVSMQARLVGNDRYLFVNTQRANPSIKTVSRFFEYKTWTEQIWRTEIIENGNAFFHWQGHDRKNGHRDTIINYLLNGQR WQSTIEDYIFFHALEGKAWQGHYDNIIEYVSSDHYVYQSAFAEYITDQIHQRAPHGTRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16695; Mature: 16695
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVSMQARLVGNDRYLFVNTQRANPSIKTVSRFFEYKTWTEQIWRTEIIENGNAFFHWQG CCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC HDRKNGHRDTIINYLLNGQRWQSTIEDYIFFHALEGKAWQGHYDNIIEYVSSDHYVYQSA CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHH FAEYITDQIHQRAPHGTRF HHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNVSMQARLVGNDRYLFVNTQRANPSIKTVSRFFEYKTWTEQIWRTEIIENGNAFFHWQG CCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC HDRKNGHRDTIINYLLNGQRWQSTIEDYIFFHALEGKAWQGHYDNIIEYVSSDHYVYQSA CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHH FAEYITDQIHQRAPHGTRF HHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA