| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is ygjQ [C]
Identifier: 16763488
GI number: 16763488
Start: 115477
End: 116097
Strand: Reverse
Name: ygjQ [C]
Synonym: STM0098
Alternate gene names: 16763488
Gene position: 116097-115477 (Counterclockwise)
Preceding gene: 16763491
Following gene: 16763487
Centisome position: 2.39
GC content: 49.44
Gene sequence:
>621_bases ATGAAATATCGCTACATCATCAGAATCGCGGCAGGCATAATTCTCATTATGGCTACGGTGTTTATCCATAATGCCATCGC TATTTATCAGTTCAGTCAGCAAAACCAGACGCGCGTAGCTGACTGCGCGATTGTCGCAGGAGCAGGCGTTAGCGGAAAAA CGCCTTCTCCCGTTTTTCAGGCCAGACTGGATCATGCCATCTGGCTTTACCAACAACACATTGTCCGCGCGTTGGTATTA ACCGGCGGCTACGGCGCTGGCGCAACGGTTTCCGACGCGGCGATAGCCCGTCAATACGTTCTGGAAAAAGGGATTCCGGC TAAGGCAATTTTTATTGAAGAGCGCTCTACCGTGACGCGCGAAAATATTCGTTACGCAAAACAGATACTGCGACAACAAC AATGGCGCACAGCGTTACTGGTCAGCGATCCGCTGCATATGCTGCGTCTGAAAACTATCGCTCAGGATAATGGTATCGAT AGCCGCTCATCACCCACGCGATCCACCCGCTATAAATCCTGGTGGGCGCAAACCCGCTTCTTACTGCGAGAAACTTTTTA TTACAGCGGATATCGGCTTTTACGTTATATGCCTGTACAAAATAACAGTATTACCCCCTAA
Upstream 100 bases:
>100_bases GTATATATTGATAAATATACGTCAGCAAAAATATCTGACGCTAAAAGCCATTTTATCGTTAAAATATCCATTACACCCGT CACGGGGAACGAACTCATTC
Downstream 100 bases:
>100_bases AACAGGTTATAATTAGCGTGAATTTTTTAGACAGGTAATCATCGTGGCGCAGGCAGGTTTCATTTTAACCCGGCACTGGC GGGATACGCCGCAAGGGACG
Product: secreted protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MKYRYIIRIAAGIILIMATVFIHNAIAIYQFSQQNQTRVADCAIVAGAGVSGKTPSPVFQARLDHAIWLYQQHIVRALVL TGGYGAGATVSDAAIARQYVLEKGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGID SRSSPTRSTRYKSWWAQTRFLLRETFYYSGYRLLRYMPVQNNSITP
Sequences:
>Translated_206_residues MKYRYIIRIAAGIILIMATVFIHNAIAIYQFSQQNQTRVADCAIVAGAGVSGKTPSPVFQARLDHAIWLYQQHIVRALVL TGGYGAGATVSDAAIARQYVLEKGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGID SRSSPTRSTRYKSWWAQTRFLLRETFYYSGYRLLRYMPVQNNSITP >Mature_206_residues MKYRYIIRIAAGIILIMATVFIHNAIAIYQFSQQNQTRVADCAIVAGAGVSGKTPSPVFQARLDHAIWLYQQHIVRALVL TGGYGAGATVSDAAIARQYVLEKGIPAKAIFIEERSTVTRENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGID SRSSPTRSTRYKSWWAQTRFLLRETFYYSGYRLLRYMPVQNNSITP
Specific function: Unknown
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23454; Mature: 23454
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYRYIIRIAAGIILIMATVFIHNAIAIYQFSQQNQTRVADCAIVAGAGVSGKTPSPVFQ CCEEEHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHEEEEECCCCCCCCCCHHHH ARLDHAIWLYQQHIVRALVLTGGYGAGATVSDAAIARQYVLEKGIPAKAIFIEERSTVTR HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHH ENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSRSSPTRSTRYKSWWAQTRF HHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH LLRETFYYSGYRLLRYMPVQNNSITP HHHHHHHHCCEEEEEEEECCCCCCCC >Mature Secondary Structure MKYRYIIRIAAGIILIMATVFIHNAIAIYQFSQQNQTRVADCAIVAGAGVSGKTPSPVFQ CCEEEHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHEEEEECCCCCCCCCCHHHH ARLDHAIWLYQQHIVRALVLTGGYGAGATVSDAAIARQYVLEKGIPAKAIFIEERSTVTR HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHH ENIRYAKQILRQQQWRTALLVSDPLHMLRLKTIAQDNGIDSRSSPTRSTRYKSWWAQTRF HHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH LLRETFYYSGYRLLRYMPVQNNSITP HHHHHHHHCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA