Click here to switch to the map view.

The map label for this gene is oadB1 [H]

Identifier: 16763444

GI number: 16763444

Start: 63548

End: 64849

Strand: Reverse

Name: oadB1 [H]

Synonym: STM0054

Alternate gene names: 16763444

Gene position: 64849-63548 (Counterclockwise)

Preceding gene: 16763445

Following gene: 16763443

Centisome position: 1.34

GC content: 63.98

Gene sequence:

>1302_bases
ATGGAAAGTCTGAACGCCCTGCTTCAGGGCATGGGGCTGATGCACCTTGGCGCAGGCCAGGCCATCATGCTGCTGGTGAG
CCTGCTGCTGCTGTGGCTGGCGATTGCGAAGAAGTTCGAGCCGTTACTGCTGCTGCCAATTGGCTTCGGCGGGCTGCTCT
CCAACATCCCGGAAGCGGGTATGGCGCTGACCGCGCTGGAAAGCCTGCTGGCGCACCACGACGCCGGGCAACTGGCGGTG
ATTGCCGCGAAGCTGAACTGCGCGCCGGACGTGCATGCCATTAAAGAGGCGTTAGCGCTGGCGCTACCGTCGGTGCAGGG
CCAGATGGAGAACCTGGCGGTGGACATGGGCTACACGCCTGGCGTACTGGCGCTGTTCTACAAAGTGGCGATTGGTTCCG
GTGTCGCGCCGCTGGTCATCTTCATGGGCGTCGGCGCGATGACCGACTTCGGCCCGCTGCTGGCCAACCCGCGCACCCTG
CTGCTGGGGGCGGCGGCGCAGTTCGGTATCTTCGCCACGGTGCTCGGGGCGCTGACGCTGAACTACTTCGGCCTTATCAG
CTTCACCCTGCCGCAGGCGGCGGCCATCGGCATTATCGGCGGCGCGGACGGCCCGACGGCGATTTACCTGTCGGGCAAGC
TGGCGCCGGAGCTGCTGGGGGCCATCGCGGTGGCGGCGTACTCGTATATGGCGCTGGTGCCGTTAATCCAGCCGCCGATT
ATGAAGGCGCTGACCAGCGAGACGGAGCGGAAAATCCGCATGGTGCAGCTGCGCACGGTGAGTAAGCGGGAAAAAATCCT
CTTCCCGGTGGTGCTGCTCATGCTGGTGGCCCTGCTGCTGCCGGACGCGGCGCCGCTGCTGGGGATGTTCTGTTTTGGCA
ACCTGATGCGCGAAAGCGGCGTGGTGGAGCGTCTGAGCGACACGGTACAGAACGGGCTGATTAATATCGTCACCATTTTC
CTCGGGCTGTCGGTGGGCGCGAAGCTGGTCGCGGATAAGTTCCTGCAACCGCAGACGCTGGGCATTCTGCTGCTGGGGGT
GATTGCGTTTGGTATCGGGACGGCGGCCGGGGTGCTGATGGCGAAGCTGCTGAACCTGTGCAGTAAGAACAAAATCAACC
CGCTTATCGGTTCGGCGGGGGTCTCGGCGGTGCCGATGGCGGCCCGCGTATCGAACAAAGTGGGGCTGGAATCAGACCCG
CAGAACTTCCTGCTGATGCACGCGATGGGCCCGAACGTGGCGGGGGTGATTGGCTCGGCCATTGCCGCGGGCGTGATGCT
GAAATACGTGCTGGCGATGTAA

Upstream 100 bases:

>100_bases
CGCCGCGCAGGCCGGGACGGTACGCGGTATCGCGGTGAAGTCCGGGGACGCGGTCTCCGTCGGCGACACCCTGATGACGC
TGGCGTAACGGAGAACTGAA

Downstream 100 bases:

>100_bases
TAGTGGATGGGATACGCATGTCGTATCCCATTTTCATCCAAATTTTTTCTGAAAGAAAAGTAAGTATGAACTGGTTCAGG
TTCCGGTGATGCCGAATGCA

Product: oxalacetate decarboxylase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MESLNALLQGMGLMHLGAGQAIMLLVSLLLLWLAIAKKFEPLLLLPIGFGGLLSNIPEAGMALTALESLLAHHDAGQLAV
IAAKLNCAPDVHAIKEALALALPSVQGQMENLAVDMGYTPGVLALFYKVAIGSGVAPLVIFMGVGAMTDFGPLLANPRTL
LLGAAAQFGIFATVLGALTLNYFGLISFTLPQAAAIGIIGGADGPTAIYLSGKLAPELLGAIAVAAYSYMALVPLIQPPI
MKALTSETERKIRMVQLRTVSKREKILFPVVLLMLVALLLPDAAPLLGMFCFGNLMRESGVVERLSDTVQNGLINIVTIF
LGLSVGAKLVADKFLQPQTLGILLLGVIAFGIGTAAGVLMAKLLNLCSKNKINPLIGSAGVSAVPMAARVSNKVGLESDP
QNFLLMHAMGPNVAGVIGSAIAAGVMLKYVLAM

Sequences:

>Translated_433_residues
MESLNALLQGMGLMHLGAGQAIMLLVSLLLLWLAIAKKFEPLLLLPIGFGGLLSNIPEAGMALTALESLLAHHDAGQLAV
IAAKLNCAPDVHAIKEALALALPSVQGQMENLAVDMGYTPGVLALFYKVAIGSGVAPLVIFMGVGAMTDFGPLLANPRTL
LLGAAAQFGIFATVLGALTLNYFGLISFTLPQAAAIGIIGGADGPTAIYLSGKLAPELLGAIAVAAYSYMALVPLIQPPI
MKALTSETERKIRMVQLRTVSKREKILFPVVLLMLVALLLPDAAPLLGMFCFGNLMRESGVVERLSDTVQNGLINIVTIF
LGLSVGAKLVADKFLQPQTLGILLLGVIAFGIGTAAGVLMAKLLNLCSKNKINPLIGSAGVSAVPMAARVSNKVGLESDP
QNFLLMHAMGPNVAGVIGSAIAAGVMLKYVLAM
>Mature_433_residues
MESLNALLQGMGLMHLGAGQAIMLLVSLLLLWLAIAKKFEPLLLLPIGFGGLLSNIPEAGMALTALESLLAHHDAGQLAV
IAAKLNCAPDVHAIKEALALALPSVQGQMENLAVDMGYTPGVLALFYKVAIGSGVAPLVIFMGVGAMTDFGPLLANPRTL
LLGAAAQFGIFATVLGALTLNYFGLISFTLPQAAAIGIIGGADGPTAIYLSGKLAPELLGAIAVAAYSYMALVPLIQPPI
MKALTSETERKIRMVQLRTVSKREKILFPVVLLMLVALLLPDAAPLLGMFCFGNLMRESGVVERLSDTVQNGLINIVTIF
LGLSVGAKLVADKFLQPQTLGILLLGVIAFGIGTAAGVLMAKLLNLCSKNKINPLIGSAGVSAVPMAARVSNKVGLESDP
QNFLLMHAMGPNVAGVIGSAIAAGVMLKYVLAM

Specific function: Lyase and sodium transporter [H]

COG id: COG1883

COG function: function code C; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gcdB/mmdB/oadB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005661 [H]

Pfam domain/function: PF03977 OAD_beta [H]

EC number: =4.1.1.3 [H]

Molecular weight: Translated: 44888; Mature: 44888

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLNALLQGMGLMHLGAGQAIMLLVSLLLLWLAIAKKFEPLLLLPIGFGGLLSNIPEAG
CCHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCH
MALTALESLLAHHDAGQLAVIAAKLNCAPDVHAIKEALALALPSVQGQMENLAVDMGYTP
HHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHEEECCCCC
GVLALFYKVAIGSGVAPLVIFMGVGAMTDFGPLLANPRTLLLGAAAQFGIFATVLGALTL
HHHHHHHHHHHCCCHHHHHHHHHCCHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
NYFGLISFTLPQAAAIGIIGGADGPTAIYLSGKLAPELLGAIAVAAYSYMALVPLIQPPI
HHHHHHHHHCCCHHHEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCHHH
MKALTSETERKIRMVQLRTVSKREKILFPVVLLMLVALLLPDAAPLLGMFCFGNLMRESG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VVERLSDTVQNGLINIVTIFLGLSVGAKLVADKFLQPQTLGILLLGVIAFGIGTAAGVLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AKLLNLCSKNKINPLIGSAGVSAVPMAARVSNKVGLESDPQNFLLMHAMGPNVAGVIGSA
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHH
IAAGVMLKYVLAM
HHHHHHHHHHHHC
>Mature Secondary Structure
MESLNALLQGMGLMHLGAGQAIMLLVSLLLLWLAIAKKFEPLLLLPIGFGGLLSNIPEAG
CCHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCH
MALTALESLLAHHDAGQLAVIAAKLNCAPDVHAIKEALALALPSVQGQMENLAVDMGYTP
HHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHEEECCCCC
GVLALFYKVAIGSGVAPLVIFMGVGAMTDFGPLLANPRTLLLGAAAQFGIFATVLGALTL
HHHHHHHHHHHCCCHHHHHHHHHCCHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
NYFGLISFTLPQAAAIGIIGGADGPTAIYLSGKLAPELLGAIAVAAYSYMALVPLIQPPI
HHHHHHHHHCCCHHHEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCHHH
MKALTSETERKIRMVQLRTVSKREKILFPVVLLMLVALLLPDAAPLLGMFCFGNLMRESG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VVERLSDTVQNGLINIVTIFLGLSVGAKLVADKFLQPQTLGILLLGVIAFGIGTAAGVLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AKLLNLCSKNKINPLIGSAGVSAVPMAARVSNKVGLESDPQNFLLMHAMGPNVAGVIGSA
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHH
IAAGVMLKYVLAM
HHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]