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The map label for this gene is lspA [H]

Identifier: 16763437

GI number: 16763437

Start: 56689

End: 57189

Strand: Direct

Name: lspA [H]

Synonym: STM0047

Alternate gene names: 16763437

Gene position: 56689-57189 (Clockwise)

Preceding gene: 16763436

Following gene: 16763438

Centisome position: 1.17

GC content: 52.89

Gene sequence:

>501_bases
ATGAGTAAACCACTCTGTTCAACAGGACTACGCTGGCTATGGCTGGTAGTAGTCGTGCTGATTATCGATTTGGGCAGCAA
ATACCTGATCCTCCAGAATTTCGCTCTGGGGGATACGGTAGGGCTGTTCCCGTCGCTTAATCTGCATTATGCGCGTAACT
ACGGCGCGGCTTTTAGCTTCCTGGCGGATAGCGGCGGCTGGCAGCGCTGGTTCTTTGCCGGGATTGCGATAGGGATCTGC
GTAATTCTTTTGGTGATGATGTATCGCTCGAAAGCGACGCAGAAGCTGAATAACATCGCTTATGCGTTAATCATCGGCGG
CGCGCTGGGTAACCTGTTCGACCGCCTGTGGCACGGCTTTGTTGTCGATATGATCGATTTTTACGTCGGCAACTGGCATT
TCGCGACGTTCAACCTTGCCGATAGCGCGATCTGTATCGGCGCGGCGCTGATAGTACTGGAAGGCTTTTTGCCGAAGCCG
ACAGCGAAAGAACAGGCATAA

Upstream 100 bases:

>100_bases
ACTACACTACTGATGTCGGCAAGGTGGCGGAACATGCAGATATCTGCGGACGCTGTGTCAGCAACATCGCCGGTAATGGC
GAACAACGTAAATTTGCCTG

Downstream 100 bases:

>100_bases
GCGTAAATACCGGGTGGCGCTTATCCGGTTTTGTAGGTCTGATAAGCGCAGCGCCATCAGGCAAACGTGGTGCCGGATGG
CGGTGAAAACGCCTTATCCG

Product: lipoprotein signal peptidase

Products: NA

Alternate protein names: Prolipoprotein signal peptidase; Signal peptidase II; SPase II [H]

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSKPLCSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVGLFPSLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGIC
VILLVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGNWHFATFNLADSAICIGAALIVLEGFLPKP
TAKEQA

Sequences:

>Translated_166_residues
MSKPLCSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVGLFPSLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGIC
VILLVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGNWHFATFNLADSAICIGAALIVLEGFLPKP
TAKEQA
>Mature_165_residues
SKPLCSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVGLFPSLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGICV
ILLVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGNWHFATFNLADSAICIGAALIVLEGFLPKPT
AKEQA

Specific function: This protein specifically catalyzes the removal of signal peptides from prolipoproteins [H]

COG id: COG0597

COG function: function code MU; Lipoprotein signal peptidase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase A8 family [H]

Homologues:

Organism=Escherichia coli, GI1786210, Length=164, Percent_Identity=91.4634146341463, Blast_Score=305, Evalue=8e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001872 [H]

Pfam domain/function: PF01252 Peptidase_A8 [H]

EC number: =3.4.23.36 [H]

Molecular weight: Translated: 18339; Mature: 18208

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS00855 SPASE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPLCSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVGLFPSLNLHYARNYGAAFSF
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCCCCHHHHCCCHHHHH
LADSGGWQRWFFAGIAIGICVILLVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGF
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVDMIDFYVGNWHFATFNLADSAICIGAALIVLEGFLPKPTAKEQA
HHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SKPLCSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVGLFPSLNLHYARNYGAAFSF
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCCCCHHHHCCCHHHHH
LADSGGWQRWFFAGIAIGICVILLVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGF
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVDMIDFYVGNWHFATFNLADSAICIGAALIVLEGFLPKPTAKEQA
HHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA