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The map label for this gene is bcfE [H]

Identifier: 16763415

GI number: 16763415

Start: 29433

End: 29978

Strand: Direct

Name: bcfE [H]

Synonym: STM0025

Alternate gene names: 16763415

Gene position: 29433-29978 (Clockwise)

Preceding gene: 16763414

Following gene: 16763416

Centisome position: 0.61

GC content: 49.45

Gene sequence:

>546_bases
ATGAACAGATCACACTGCGCTCTTTTTGCCATGGGACTGATGCTGTGTCCACAAATCAATGCCAGCGCTGACGACCTCGC
TTATAACCTCGAATTTACCGGCACTATTGTGGCGCAAACCTGCGACATAGATATTTCCAGTCTCAGTCAAAGTATTGATT
TAGGGCAGTTTGCAGTTGGCGATTTCCCCTCGACGGGAACAACGACAAAATTTAAGCCCTTTAATATCAACCTCAAAAAT
TGTTCCCGAGGAATTACCGGGGCGAAGATCTGGTTTACCGGCGAACCCGATCCGGACAATCCCGCGCTACTGGCGATAAC
CGACACCGGGATGGGAAGCGGAAACATGTTAGCAAGCGGGGTTGGGGTGGAAATTCTGAATGATGATCAGGATACCATCA
GTATCAATAATGCCGACTCGGTGGTCTATCCGTTGAAAGCCGGACGCAACACGCTGTCTTTTTATATTCGCTATAAATCG
ACCCGGCCGACGGTCACGTCCGGGAACGCGACGGCGGTCATGTATTTCGATATGCAGTATGAATGA

Upstream 100 bases:

>100_bases
TAACATCACATTGCAGGCCTACCCGGTAAGTACAACAGGCGAAACGCCTGCGGAAGGGGCATTTACCGCACTGGCCAGCC
TGCGAGTGGACTTTGACTAA

Downstream 100 bases:

>100_bases
GGAGCCATCGTAATTATGCGTAACGATATCCTGTACGGCATCGGGATGCTGCTGGCGGCATCCGGCGTCCAGGCGCACGA
TGGCCGGGTCTATGTTTCCG

Product: fimbrial subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MNRSHCALFAMGLMLCPQINASADDLAYNLEFTGTIVAQTCDIDISSLSQSIDLGQFAVGDFPSTGTTTKFKPFNINLKN
CSRGITGAKIWFTGEPDPDNPALLAITDTGMGSGNMLASGVGVEILNDDQDTISINNADSVVYPLKAGRNTLSFYIRYKS
TRPTVTSGNATAVMYFDMQYE

Sequences:

>Translated_181_residues
MNRSHCALFAMGLMLCPQINASADDLAYNLEFTGTIVAQTCDIDISSLSQSIDLGQFAVGDFPSTGTTTKFKPFNINLKN
CSRGITGAKIWFTGEPDPDNPALLAITDTGMGSGNMLASGVGVEILNDDQDTISINNADSVVYPLKAGRNTLSFYIRYKS
TRPTVTSGNATAVMYFDMQYE
>Mature_181_residues
MNRSHCALFAMGLMLCPQINASADDLAYNLEFTGTIVAQTCDIDISSLSQSIDLGQFAVGDFPSTGTTTKFKPFNINLKN
CSRGITGAKIWFTGEPDPDNPALLAITDTGMGSGNMLASGVGVEILNDDQDTISINNADSVVYPLKAGRNTLSFYIRYKS
TRPTVTSGNATAVMYFDMQYE

Specific function: Unknown

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787174, Length=154, Percent_Identity=44.1558441558442, Blast_Score=126, Evalue=7e-31,
Organism=Escherichia coli, GI87082421, Length=154, Percent_Identity=29.2207792207792, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1790773, Length=144, Percent_Identity=34.0277777777778, Blast_Score=81, Evalue=4e-17,
Organism=Escherichia coli, GI1787781, Length=163, Percent_Identity=31.2883435582822, Blast_Score=79, Evalue=1e-16,
Organism=Escherichia coli, GI87081753, Length=154, Percent_Identity=33.1168831168831, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1786746, Length=152, Percent_Identity=28.2894736842105, Blast_Score=64, Evalue=5e-12,
Organism=Escherichia coli, GI87081805, Length=181, Percent_Identity=29.2817679558011, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 19478; Mature: 19478

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRSHCALFAMGLMLCPQINASADDLAYNLEFTGTIVAQTCDIDISSLSQSIDLGQFAVG
CCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEEECCCHHHHHCCCCCCEEEEC
DFPSTGTTTKFKPFNINLKNCSRGITGAKIWFTGEPDPDNPALLAITDTGMGSGNMLASG
CCCCCCCCCEEEEEEEEHHHCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCEEECC
VGVEILNDDQDTISINNADSVVYPLKAGRNTLSFYIRYKSTRPTVTSGNATAVMYFDMQY
CCEEEECCCCCEEEECCCCCEEEEECCCCCEEEEEEEEECCCCEEECCCEEEEEEEEEEE
E
C
>Mature Secondary Structure
MNRSHCALFAMGLMLCPQINASADDLAYNLEFTGTIVAQTCDIDISSLSQSIDLGQFAVG
CCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEEECCCHHHHHCCCCCCEEEEC
DFPSTGTTTKFKPFNINLKNCSRGITGAKIWFTGEPDPDNPALLAITDTGMGSGNMLASG
CCCCCCCCCEEEEEEEEHHHCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCEEECC
VGVEILNDDQDTISINNADSVVYPLKAGRNTLSFYIRYKSTRPTVTSGNATAVMYFDMQY
CCEEEECCCCCEEEECCCCCEEEEECCCCCEEEEEEEEECCCCEEECCCEEEEEEEEEEE
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]