| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16763409
Identifier: 16763409
GI number: 16763409
Start: 20058
End: 23054
Strand: Direct
Name: 16763409
Synonym: STM0019
Alternate gene names: NA
Gene position: 20058-23054 (Clockwise)
Preceding gene: 16763408
Following gene: 16763410
Centisome position: 0.41
GC content: 54.85
Gene sequence:
>2997_bases ATGACCATTTCCATTCACGCCAGCGCATTTGACGTCAACAGCTGGTATCAAAAAATTACCTTAACTTTCATCAATGAGAG CGGTAATGCGGTCGATATGAACCATGCCGCAATATCATTCACGGCTTCCGGGCACATCGATCCATGGGGAAATAGCGGCG GTACGCTCAAAGGGAACCTGCCGCTTACGCTGAATGAGAGTTCGTATGGCACGCTGGAAACTAACAACATCATCATTAAT AACAGCGATGCATTACTTCTTCAGCCGGGCGAACGCGGGACGCTCTCTTTCAGCCTCGCGGCGACGCAGGTGCCGGTAAA AATGTCCGCCATCACCTTGACGCTGGCGTCATCGTCATCCGAAGACGCAGAGTCTGCAACCCCATCCGATCAGGAGACGC CAGCGATACCCGCCGCAGACGAACAACCCGCCGAACCCGATGTGCCGGAAAAGGACAATGACCTTCAGGAACACGGCCTT ACGCTTAACGTTAGCGAGTTGAATACCGCAAGTTGGTATCAACGCGTCACCTTTACGCTGACCAACCTCTACGCCCAGGC GGTAGATCTCAATCAGCTTCAACTGAATTTTACGGCCAGCGCGCACCCCGATCCCTACAGTCCGTTTCAGGGAACAATGT TGGGGAATCAGGCCGTGACGCTGGCCAGCGATGGGGGATGGCCCATCGAGAAGAATACCATCACCATTAATCATGACGGC GCGCTGATACTGGCGGCGGGGGATACCGCCGAATTACAGTGCTATCTGGCCGCCACGCAGACGCCAGTTGCCATCAGCGA TTTGAACGCGACGTTGGCCCATGATCCTGCCCGTCAGGGAAAAGTTTGCGTTCATTTTCCTGCCATGACGCAGACCGTGG CGCTCAAACCGGTGATTGAGCTGCTGTTTCCTGCCGGCGAAACCCGGCGCTTTGTCGGTGAGTGGGGCGAGGTTCTGACA ATAGGCGATCTTAGCGCAGGAACGTATCGGCTTACCGTACCGGTACTGGCGAATGATGAGATGCAAATCGCGCCAGTCGA GTCCTCTTTTACCGTTACGCTGCAATCCGGCGATGCCGCCGCGCAGGTCCAGGTATCCTGTCTGCCGATTGTCCGTTATG CCAGCGCGCGTCTGATGATTGACGCCCCTGCGCTTGGTAATGCGAAATTGACCGTTGAGATCGCCGATGCTACGCAAGCG GATGAGCGTACCGTCACGCTGATCGCCAACCAACCGCAGTTAATCACCCGGCTACTGGCGGGGCATCATTATACGGTCAA TCTGCAGCCTGCGATGATTAATAACCGCTTTATATCGGCACCCATACAGCTTACGGGGTTTATCCCTGCTGCGGCGCAGA TTGCCGAGGTTGCTGTCGCTTACCAACAGTCGGCGCTCGACACGGCGAGTTTCGTGACGGTGGATGCCACTATACTGGGC CTGCCCGATGGCGTCGCGCCGCAGCGTTATCTGTTCAGCAGCGGTAAATATCAGTACTCATTAATGCTGGAGAGCGGCAG CGATCGGCAGACGTTGGCATTACGCTTTGCACCCGGGCTGTATGATGTTCAGACGGACGACATTTTCATCGACAGTGTGC CGTGGCGTTGTGAACAGGCCGGGCCGCTACGGTTGTTGCAAAAGGTCAACCATGTGGCGCTGGAGTTTCTGCCCGGCGTG ACGCTACAGGTAAAAGGTTGGCCTGATTACCTTGCTCATGGCGGCGTGACGGTTAACGCGCCAGAGACGGTTTCTCTTTA TCGCGATATACCGTTTAGCGCGTTGTTTAAATACGATGGTTTTGACGGCGGCGGCGATCCGGTTCCGGCCGCGGAGGTTG ACGTGAACGGGGATGGTTTTCTGGATTACGCGACGTTACCGATCCATAAAACCGTTGCGCTGGTGCGCCAGATAGAAAAA GAAGCCGGGCGTAGCGTCATGCCGGTAATGGTCATTTATACCGCGAATGCCAGCGGCGGTAGCGCGCTGGCGGATTTACA GGATGCGCAAAAGCTACGTAACCATTTTGGTAACTTTATTACCCAGTGTCTGGCGGCGCAGTCATACAAAGATGAGACGC ATCCTGTCCCGGCCACCTTTGTGCTTAACCCGGATTTTCTCGGGGCACTACAGCAAGGACCGTATGGCTATACCGTAGTA CGGCAAAAAAACAGTGTGCCGGTGAATGCCCAACTGGCGGCGGCGATACAAGCATTACCGGCGATGGCTGGCTTTATCGC GCCTTCGTTGCCGACGTTTAGCGACGATCTCTACGGCTATATTCAGGCGGTGAACTATCTTGTTCGTCAGTTTGCCCCGG ATGTGGCTTTTGGCTGGCAGACGAATGTCTGGGCGACAGGAACGGCGGACTGGGTGCTGCGCGATACCGCTGATCCGGTA GCTGAAGGGCAGGCGATCGCCGGATTTATTCATGAACTGGGCGTTTACAGCGGAGAATATGCGCCGGACTTTATTGCGTT TGATAAATTTGAGTGTGACTGTTTCAGTCCTGATGCGCTTGCCCACTATGGCTGGAATGCGACATGCTGGCTTAATTACC TGGCGATGGTCAAACAGGTGACGAAAGCGCTGCTGACGCCCGCCATGCTGTGGCAAATCCCAGGCGGCCATATGCCTACA GTAGAAGAGGGCGTCAGTAAAATCAGCGCTGCGCACTTTGCATCCGGCGGAACCTTTTTTATGGGTGACGCCCGCATTGG CAGCGATCCTGACACGCTCTCTTTGCAGCTACTCAATACGGCCTTAAATAGCGCGACTTACGGCGTCCCGACCGTCGGCG ACTTTTTACGTAAAGATAAAGGGTATGACTGGGGCCAAATGCAGGCGCTGAACCTACCGGACTTTAACGTCTTTTCGATC TTATGGGGCGGTGGTTCTACTATCAGTATTACGACAATCCATTCTAACGGTGAAGACGGCGGCTGGCTGGCGGATAAAAT GGTAGAGTATTATGCTGCCCCTCGCTATTTCAGATAA
Upstream 100 bases:
>100_bases GCTTACTAATACACGGTATTAAGCCGATGTATTGGGCTTCATGATTCAAGCCCCGGTTTACCGGGGCTTTTCTCCACCAG GGACAGAGGAAGAGTAGACC
Downstream 100 bases:
>100_bases TATCACTGCTTATTTGCATTAATCTGGACTATTAGTTTGAGATTCGAAGGCGCGTTCTTTCGAATCTCTTTTCCTGCGCC CCCTGACCTCTCATTCTTTA
Product: hydroxymethyltransferase
Products: NA
Alternate protein names: Hydroxymethyltransferase
Number of amino acids: Translated: 998; Mature: 997
Protein sequence:
>998_residues MTISIHASAFDVNSWYQKITLTFINESGNAVDMNHAAISFTASGHIDPWGNSGGTLKGNLPLTLNESSYGTLETNNIIIN NSDALLLQPGERGTLSFSLAATQVPVKMSAITLTLASSSSEDAESATPSDQETPAIPAADEQPAEPDVPEKDNDLQEHGL TLNVSELNTASWYQRVTFTLTNLYAQAVDLNQLQLNFTASAHPDPYSPFQGTMLGNQAVTLASDGGWPIEKNTITINHDG ALILAAGDTAELQCYLAATQTPVAISDLNATLAHDPARQGKVCVHFPAMTQTVALKPVIELLFPAGETRRFVGEWGEVLT IGDLSAGTYRLTVPVLANDEMQIAPVESSFTVTLQSGDAAAQVQVSCLPIVRYASARLMIDAPALGNAKLTVEIADATQA DERTVTLIANQPQLITRLLAGHHYTVNLQPAMINNRFISAPIQLTGFIPAAAQIAEVAVAYQQSALDTASFVTVDATILG LPDGVAPQRYLFSSGKYQYSLMLESGSDRQTLALRFAPGLYDVQTDDIFIDSVPWRCEQAGPLRLLQKVNHVALEFLPGV TLQVKGWPDYLAHGGVTVNAPETVSLYRDIPFSALFKYDGFDGGGDPVPAAEVDVNGDGFLDYATLPIHKTVALVRQIEK EAGRSVMPVMVIYTANASGGSALADLQDAQKLRNHFGNFITQCLAAQSYKDETHPVPATFVLNPDFLGALQQGPYGYTVV RQKNSVPVNAQLAAAIQALPAMAGFIAPSLPTFSDDLYGYIQAVNYLVRQFAPDVAFGWQTNVWATGTADWVLRDTADPV AEGQAIAGFIHELGVYSGEYAPDFIAFDKFECDCFSPDALAHYGWNATCWLNYLAMVKQVTKALLTPAMLWQIPGGHMPT VEEGVSKISAAHFASGGTFFMGDARIGSDPDTLSLQLLNTALNSATYGVPTVGDFLRKDKGYDWGQMQALNLPDFNVFSI LWGGGSTISITTIHSNGEDGGWLADKMVEYYAAPRYFR
Sequences:
>Translated_998_residues MTISIHASAFDVNSWYQKITLTFINESGNAVDMNHAAISFTASGHIDPWGNSGGTLKGNLPLTLNESSYGTLETNNIIIN NSDALLLQPGERGTLSFSLAATQVPVKMSAITLTLASSSSEDAESATPSDQETPAIPAADEQPAEPDVPEKDNDLQEHGL TLNVSELNTASWYQRVTFTLTNLYAQAVDLNQLQLNFTASAHPDPYSPFQGTMLGNQAVTLASDGGWPIEKNTITINHDG ALILAAGDTAELQCYLAATQTPVAISDLNATLAHDPARQGKVCVHFPAMTQTVALKPVIELLFPAGETRRFVGEWGEVLT IGDLSAGTYRLTVPVLANDEMQIAPVESSFTVTLQSGDAAAQVQVSCLPIVRYASARLMIDAPALGNAKLTVEIADATQA DERTVTLIANQPQLITRLLAGHHYTVNLQPAMINNRFISAPIQLTGFIPAAAQIAEVAVAYQQSALDTASFVTVDATILG LPDGVAPQRYLFSSGKYQYSLMLESGSDRQTLALRFAPGLYDVQTDDIFIDSVPWRCEQAGPLRLLQKVNHVALEFLPGV TLQVKGWPDYLAHGGVTVNAPETVSLYRDIPFSALFKYDGFDGGGDPVPAAEVDVNGDGFLDYATLPIHKTVALVRQIEK EAGRSVMPVMVIYTANASGGSALADLQDAQKLRNHFGNFITQCLAAQSYKDETHPVPATFVLNPDFLGALQQGPYGYTVV RQKNSVPVNAQLAAAIQALPAMAGFIAPSLPTFSDDLYGYIQAVNYLVRQFAPDVAFGWQTNVWATGTADWVLRDTADPV AEGQAIAGFIHELGVYSGEYAPDFIAFDKFECDCFSPDALAHYGWNATCWLNYLAMVKQVTKALLTPAMLWQIPGGHMPT VEEGVSKISAAHFASGGTFFMGDARIGSDPDTLSLQLLNTALNSATYGVPTVGDFLRKDKGYDWGQMQALNLPDFNVFSI LWGGGSTISITTIHSNGEDGGWLADKMVEYYAAPRYFR >Mature_997_residues TISIHASAFDVNSWYQKITLTFINESGNAVDMNHAAISFTASGHIDPWGNSGGTLKGNLPLTLNESSYGTLETNNIIINN SDALLLQPGERGTLSFSLAATQVPVKMSAITLTLASSSSEDAESATPSDQETPAIPAADEQPAEPDVPEKDNDLQEHGLT LNVSELNTASWYQRVTFTLTNLYAQAVDLNQLQLNFTASAHPDPYSPFQGTMLGNQAVTLASDGGWPIEKNTITINHDGA LILAAGDTAELQCYLAATQTPVAISDLNATLAHDPARQGKVCVHFPAMTQTVALKPVIELLFPAGETRRFVGEWGEVLTI GDLSAGTYRLTVPVLANDEMQIAPVESSFTVTLQSGDAAAQVQVSCLPIVRYASARLMIDAPALGNAKLTVEIADATQAD ERTVTLIANQPQLITRLLAGHHYTVNLQPAMINNRFISAPIQLTGFIPAAAQIAEVAVAYQQSALDTASFVTVDATILGL PDGVAPQRYLFSSGKYQYSLMLESGSDRQTLALRFAPGLYDVQTDDIFIDSVPWRCEQAGPLRLLQKVNHVALEFLPGVT LQVKGWPDYLAHGGVTVNAPETVSLYRDIPFSALFKYDGFDGGGDPVPAAEVDVNGDGFLDYATLPIHKTVALVRQIEKE AGRSVMPVMVIYTANASGGSALADLQDAQKLRNHFGNFITQCLAAQSYKDETHPVPATFVLNPDFLGALQQGPYGYTVVR QKNSVPVNAQLAAAIQALPAMAGFIAPSLPTFSDDLYGYIQAVNYLVRQFAPDVAFGWQTNVWATGTADWVLRDTADPVA EGQAIAGFIHELGVYSGEYAPDFIAFDKFECDCFSPDALAHYGWNATCWLNYLAMVKQVTKALLTPAMLWQIPGGHMPTV EEGVSKISAAHFASGGTFFMGDARIGSDPDTLSLQLLNTALNSATYGVPTVGDFLRKDKGYDWGQMQALNLPDFNVFSIL WGGGSTISITTIHSNGEDGGWLADKMVEYYAAPRYFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 107380; Mature: 107249
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISIHASAFDVNSWYQKITLTFINESGNAVDMNHAAISFTASGHIDPWGNSGGTLKGNL CEEEEEEEEEECCCCEEEEEEEEECCCCCEEEECCEEEEEEECCCCCCCCCCCCEEECCC PLTLNESSYGTLETNNIIINNSDALLLQPGERGTLSFSLAATQVPVKMSAITLTLASSSS CEEECCCCCCEEEECEEEEECCCEEEECCCCCCEEEEEEEEEECCEEEEEEEEEEECCCC EDAESATPSDQETPAIPAADEQPAEPDVPEKDNDLQEHGLTLNVSELNTASWYQRVTFTL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEHHCCCHHHHHHHHHHH TNLYAQAVDLNQLQLNFTASAHPDPYSPFQGTMLGNQAVTLASDGGWPIEKNTITINHDG HHHHHHHCCCEEEEEEEEECCCCCCCCCCCCEEECCEEEEEECCCCCCEECCEEEEECCC ALILAAGDTAELQCYLAATQTPVAISDLNATLAHDPARQGKVCVHFPAMTQTVALKPVIE EEEEEECCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHH LLFPAGETRRFVGEWGEVLTIGDLSAGTYRLTVPVLANDEMQIAPVESSFTVTLQSGDAA HHCCCCCHHHHHHCCCCEEEEECCCCCEEEEEEEEEECCCEEEEEECCEEEEEEECCCCE AQVQVSCLPIVRYASARLMIDAPALGNAKLTVEIADATQADERTVTLIANQPQLITRLLA EEEEEEEEEEEEECCCEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEECCHHHHHHHHC GHHYTVNLQPAMINNRFISAPIQLTGFIPAAAQIAEVAVAYQQSALDTASFVTVDATILG CCEEEEEEEEEEECCEEEECCEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEE LPDGVAPQRYLFSSGKYQYSLMLESGSDRQTLALRFAPGLYDVQTDDIFIDSVPWRCEQA CCCCCCCCHHHCCCCCEEEEEEEECCCCCEEEEEEECCCEEECCCCCEEEECCCCCCCCC GPLRLLQKVNHVALEFLPGVTLQVKGWPDYLAHGGVTVNAPETVSLYRDIPFSALFKYDG CHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCEEECCCCEEEEECCCCHHHEEEECC FDGGGDPVPAAEVDVNGDGFLDYATLPIHKTVALVRQIEKEAGRSVMPVMVIYTANASGG CCCCCCCCCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC SALADLQDAQKLRNHFGNFITQCLAAQSYKDETHPVPATFVLNPDFLGALQQGPYGYTVV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHCCCCCEEEE RQKNSVPVNAQLAAAIQALPAMAGFIAPSLPTFSDDLYGYIQAVNYLVRQFAPDVAFGWQ EECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCC TNVWATGTADWVLRDTADPVAEGQAIAGFIHELGVYSGEYAPDFIAFDKFECDCFSPDAL CCEEECCCCCEEEECCCCCHHCCHHHHHHHHHHCCCCCCCCCCEEEECCEECCCCCCCHH AHYGWNATCWLNYLAMVKQVTKALLTPAMLWQIPGGHMPTVEEGVSKISAAHFASGGTFF HHCCCCHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCHHHHHHHHHHHHCCCCCEEE MGDARIGSDPDTLSLQLLNTALNSATYGVPTVGDFLRKDKGYDWGQMQALNLPDFNVFSI EECCCCCCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCEEEE LWGGGSTISITTIHSNGEDGGWLADKMVEYYAAPRYFR EECCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure TISIHASAFDVNSWYQKITLTFINESGNAVDMNHAAISFTASGHIDPWGNSGGTLKGNL EEEEEEEEEECCCCEEEEEEEEECCCCCEEEECCEEEEEEECCCCCCCCCCCCEEECCC PLTLNESSYGTLETNNIIINNSDALLLQPGERGTLSFSLAATQVPVKMSAITLTLASSSS CEEECCCCCCEEEECEEEEECCCEEEECCCCCCEEEEEEEEEECCEEEEEEEEEEECCCC EDAESATPSDQETPAIPAADEQPAEPDVPEKDNDLQEHGLTLNVSELNTASWYQRVTFTL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEHHCCCHHHHHHHHHHH TNLYAQAVDLNQLQLNFTASAHPDPYSPFQGTMLGNQAVTLASDGGWPIEKNTITINHDG HHHHHHHCCCEEEEEEEEECCCCCCCCCCCCEEECCEEEEEECCCCCCEECCEEEEECCC ALILAAGDTAELQCYLAATQTPVAISDLNATLAHDPARQGKVCVHFPAMTQTVALKPVIE EEEEEECCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHH LLFPAGETRRFVGEWGEVLTIGDLSAGTYRLTVPVLANDEMQIAPVESSFTVTLQSGDAA HHCCCCCHHHHHHCCCCEEEEECCCCCEEEEEEEEEECCCEEEEEECCEEEEEEECCCCE AQVQVSCLPIVRYASARLMIDAPALGNAKLTVEIADATQADERTVTLIANQPQLITRLLA EEEEEEEEEEEEECCCEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEECCHHHHHHHHC GHHYTVNLQPAMINNRFISAPIQLTGFIPAAAQIAEVAVAYQQSALDTASFVTVDATILG CCEEEEEEEEEEECCEEEECCEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEE LPDGVAPQRYLFSSGKYQYSLMLESGSDRQTLALRFAPGLYDVQTDDIFIDSVPWRCEQA CCCCCCCCHHHCCCCCEEEEEEEECCCCCEEEEEEECCCEEECCCCCEEEECCCCCCCCC GPLRLLQKVNHVALEFLPGVTLQVKGWPDYLAHGGVTVNAPETVSLYRDIPFSALFKYDG CHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCEEECCCCEEEEECCCCHHHEEEECC FDGGGDPVPAAEVDVNGDGFLDYATLPIHKTVALVRQIEKEAGRSVMPVMVIYTANASGG CCCCCCCCCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC SALADLQDAQKLRNHFGNFITQCLAAQSYKDETHPVPATFVLNPDFLGALQQGPYGYTVV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHCCCCCEEEE RQKNSVPVNAQLAAAIQALPAMAGFIAPSLPTFSDDLYGYIQAVNYLVRQFAPDVAFGWQ EECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCC TNVWATGTADWVLRDTADPVAEGQAIAGFIHELGVYSGEYAPDFIAFDKFECDCFSPDAL CCEEECCCCCEEEECCCCCHHCCHHHHHHHHHHCCCCCCCCCCEEEECCEECCCCCCCHH AHYGWNATCWLNYLAMVKQVTKALLTPAMLWQIPGGHMPTVEEGVSKISAAHFASGGTFF HHCCCCHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCHHHHHHHHHHHHCCCCCEEE MGDARIGSDPDTLSLQLLNTALNSATYGVPTVGDFLRKDKGYDWGQMQALNLPDFNVFSI EECCCCCCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCEEEE LWGGGSTISITTIHSNGEDGGWLADKMVEYYAAPRYFR EECCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA