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The map label for this gene is yaaA [H]

Identifier: 16763395

GI number: 16763395

Start: 5114

End: 5887

Strand: Reverse

Name: yaaA [H]

Synonym: STM0005

Alternate gene names: 16763395

Gene position: 5887-5114 (Counterclockwise)

Preceding gene: 16763396

Following gene: NA

Centisome position: 0.12

GC content: 50.65

Gene sequence:

>774_bases
ATGCTGATTCTGATTTCACCTGCAAAAACGCTTGATTATCAAAGCCCGCTGGCCACGACCCGCTATACCCAGCCGGAGCT
GTTGGATCACAGCCAGCAGCTTATTCAACAGGCCCGCCAGCTTTCGGCGCCGCAAATTTCCAGGCTGATGGGAATTAGCG
ACAAACTGGCGGATCTCAACGCCACGCGTTTTCATGACTGGCAGCCTCATTTTACGCCGGATAATGCACGCCAGGCGATT
CTGGCGTTCAAAGGCGATGTTTATACCGGCCTACAGGCGGAAACGTTCAACGACGCGGATTTTGATTTTGCTCAACAACA
TCTGCGTATGCTCTCTGGCTTGTATGGCGTATTGCGCCCGCTGGATTTAATGCAGCCTTATCGTCTGGAGATGGGGATTC
GCCTGGAGAATCCGCGCGGCAAAGATCTTTATCAATTCTGGGGCGATATCATTACCGATAAGCTCAACGAAGCGCTTGAG
GCGCAGGGCGATCGGGTGGTGGTGAATCTGGCCTCCGAGGAATATTTTAAATCGGTGAAGCCGAAGAAACTGAATGCCGA
ACTGATTAAGCCCGTGTTCCTTGATGAGAAAAACGGCAAGTTTAAGGTGGTAAGCTTCTACGCCAAAAAAGCGCGCGGAC
TGATGAGCCGTTTTATTATTGAAAACCGCTTAACGAAGCCGGAACAGCTTACCGCGTTTGACCGTGAAGGGTATTTCTTT
GATGAAGAAACCTCCACACAAGACGAGCTGGTCTTTAAACGCTACGAGCAGTAA

Upstream 100 bases:

>100_bases
GGAGGCGGCATCGCGCGATTAAGCCGACAATCGCAACCATCGGTCAACTCTGCGGCGTTTTTTTGCTAAAGTCGCAGAAA
ATTCCCTGCAAGGACTGAAT

Downstream 100 bases:

>100_bases
CGGCATCGCCGGATGGCGGTTACGCCTTATCCGGCCTACAAATCGACACCACCCCATAGGCCCGGTAAGCGACAGCGCCA
CCGGGCGCAATGGTTATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MLILISPAKTLDYQSPLATTRYTQPELLDHSQQLIQQARQLSAPQISRLMGISDKLADLNATRFHDWQPHFTPDNARQAI
LAFKGDVYTGLQAETFNDADFDFAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENPRGKDLYQFWGDIITDKLNEALE
AQGDRVVVNLASEEYFKSVKPKKLNAELIKPVFLDEKNGKFKVVSFYAKKARGLMSRFIIENRLTKPEQLTAFDREGYFF
DEETSTQDELVFKRYEQ

Sequences:

>Translated_257_residues
MLILISPAKTLDYQSPLATTRYTQPELLDHSQQLIQQARQLSAPQISRLMGISDKLADLNATRFHDWQPHFTPDNARQAI
LAFKGDVYTGLQAETFNDADFDFAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENPRGKDLYQFWGDIITDKLNEALE
AQGDRVVVNLASEEYFKSVKPKKLNAELIKPVFLDEKNGKFKVVSFYAKKARGLMSRFIIENRLTKPEQLTAFDREGYFF
DEETSTQDELVFKRYEQ
>Mature_257_residues
MLILISPAKTLDYQSPLATTRYTQPELLDHSQQLIQQARQLSAPQISRLMGISDKLADLNATRFHDWQPHFTPDNARQAI
LAFKGDVYTGLQAETFNDADFDFAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENPRGKDLYQFWGDIITDKLNEALE
AQGDRVVVNLASEEYFKSVKPKKLNAELIKPVFLDEKNGKFKVVSFYAKKARGLMSRFIIENRLTKPEQLTAFDREGYFF
DEETSTQDELVFKRYEQ

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family [H]

Homologues:

Organism=Escherichia coli, GI1786187, Length=257, Percent_Identity=86.3813229571984, Blast_Score=463, Evalue=1e-132,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005583 [H]

Pfam domain/function: PF03883 DUF328 [H]

EC number: NA

Molecular weight: Translated: 29764; Mature: 29764

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILISPAKTLDYQSPLATTRYTQPELLDHSQQLIQQARQLSAPQISRLMGISDKLADLN
CEEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHCCC
ATRFHDWQPHFTPDNARQAILAFKGDVYTGLQAETFNDADFDFAQQHLRMLSGLYGVLRP
CCCCCCCCCCCCCCHHHHEEHEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LDLMQPYRLEMGIRLENPRGKDLYQFWGDIITDKLNEALEAQGDRVVVNLASEEYFKSVK
HHHCCCCEEEECEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCC
PKKLNAELIKPVFLDEKNGKFKVVSFYAKKARGLMSRFIIENRLTKPEQLTAFDREGYFF
CCCCCHHHHCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCEE
DEETSTQDELVFKRYEQ
CCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MLILISPAKTLDYQSPLATTRYTQPELLDHSQQLIQQARQLSAPQISRLMGISDKLADLN
CEEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHCCC
ATRFHDWQPHFTPDNARQAILAFKGDVYTGLQAETFNDADFDFAQQHLRMLSGLYGVLRP
CCCCCCCCCCCCCCHHHHEEHEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LDLMQPYRLEMGIRLENPRGKDLYQFWGDIITDKLNEALEAQGDRVVVNLASEEYFKSVK
HHHCCCCEEEECEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCC
PKKLNAELIKPVFLDEKNGKFKVVSFYAKKARGLMSRFIIENRLTKPEQLTAFDREGYFF
CCCCCHHHHCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCEE
DEETSTQDELVFKRYEQ
CCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA