Click here to switch to the map view.

The map label for this gene is 167625961

Identifier: 167625961

GI number: 167625961

Start: 4940481

End: 4941473

Strand: Reverse

Name: 167625961

Synonym: Shal_4056

Alternate gene names: NA

Gene position: 4941473-4940481 (Counterclockwise)

Preceding gene: 167625963

Following gene: 167625960

Centisome position: 94.54

GC content: 36.25

Gene sequence:

>993_bases
ATGCCAACTATTAATGACAATAAGCAAACGAAAAAGAAAGTACAAAACTCTAATAAAGCTACAAAGCAACGCCGAGGTTT
CGGGAGCATTTGTCCATCAATTGACAGTACAACCGACATTGATTGTGACGGAAATGTTAGGCAGGTTGAGTACGAGGTTA
TTAGTGAACAGACTTTGGCTATTTCTAAAGTCAGTATTGAGGAAGGGGGACTAATATCAGCTAAGGGAGGCGAAAGCTCA
TTATTAAGCTCAGTGCTCCATGGTCTAGTGAATTTAGAAAATAATAGAACTTATTTATCAGATGAAAGAATTTCAAAATG
GGGGAGACTTTGTAATGAAGCATTAAAGTTTAAACGTATCGTTATATATATGTCAGTGGAGCTAGATTTACCTCAGACAA
TTGGAATGACCCAAAGAGCATACTTTGAAAAATATTTTAACTTTGCCGATTACGAAGTATCAAAGACACTTAGAAATGTA
CAAACATTGGTACTTTTAAAGTTTGGGGTGATCTCTATTCATGAACTAGAGAACCGACAATGTTTGAGTGATCTTGGTGA
TGAAAATGATCTCGTTCTCAACAGTTACTCAATTATCCGATCTGAAAGTGGTGACTTGCATCTCCAGAATATTTATGAGG
AATGCAACAGAATAGTTGCTGAGAACAAATCTATTAAGAAAGTTACTGGTAAATTGATTAATGACGTCAACAAAGTAGCT
CTTCAAAGTGAGGTTCTTTGTCAAACTATCGAGAGTGGTGCTATTGAAGAGTATGAACGTGTTGACTCTATTTTACCTTT
TATAGATAAAAGTGGAGTAGAGACGACTAAGAGGAATATTAATGTAGGTACAGCCTTGGAAAGCTTAACTGATTACTGGG
AGAAAACTAAATCTGTCTCGAAGTGTTTGACTGAGTATAGCCCTGAGAGCATTAATGAAATGAAAAAACGGGCTCGCTTG
TTAGTAGAAGCTGTTGAAGAGCTAGAAAATTAG

Upstream 100 bases:

>100_bases
TATCATTGGTTTCCGGCTGCTATGCCGTGATTATTGTTAGCTATTTTATAAAATAGTAGTTGTTTAAAGGAGTTCTACAG
ACAAAATAAAGAGGATAATA

Downstream 100 bases:

>100_bases
CGTTTTATAAGGGAGATTATAAGCGCACGTCACTCTAGATCTGACACTTGCAAATTTGCAACTAATAAGAGACTTATGAA
TGAAAAAACTACTAGCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MPTINDNKQTKKKVQNSNKATKQRRGFGSICPSIDSTTDIDCDGNVRQVEYEVISEQTLAISKVSIEEGGLISAKGGESS
LLSSVLHGLVNLENNRTYLSDERISKWGRLCNEALKFKRIVIYMSVELDLPQTIGMTQRAYFEKYFNFADYEVSKTLRNV
QTLVLLKFGVISIHELENRQCLSDLGDENDLVLNSYSIIRSESGDLHLQNIYEECNRIVAENKSIKKVTGKLINDVNKVA
LQSEVLCQTIESGAIEEYERVDSILPFIDKSGVETTKRNINVGTALESLTDYWEKTKSVSKCLTEYSPESINEMKKRARL
LVEAVEELEN

Sequences:

>Translated_330_residues
MPTINDNKQTKKKVQNSNKATKQRRGFGSICPSIDSTTDIDCDGNVRQVEYEVISEQTLAISKVSIEEGGLISAKGGESS
LLSSVLHGLVNLENNRTYLSDERISKWGRLCNEALKFKRIVIYMSVELDLPQTIGMTQRAYFEKYFNFADYEVSKTLRNV
QTLVLLKFGVISIHELENRQCLSDLGDENDLVLNSYSIIRSESGDLHLQNIYEECNRIVAENKSIKKVTGKLINDVNKVA
LQSEVLCQTIESGAIEEYERVDSILPFIDKSGVETTKRNINVGTALESLTDYWEKTKSVSKCLTEYSPESINEMKKRARL
LVEAVEELEN
>Mature_329_residues
PTINDNKQTKKKVQNSNKATKQRRGFGSICPSIDSTTDIDCDGNVRQVEYEVISEQTLAISKVSIEEGGLISAKGGESSL
LSSVLHGLVNLENNRTYLSDERISKWGRLCNEALKFKRIVIYMSVELDLPQTIGMTQRAYFEKYFNFADYEVSKTLRNVQ
TLVLLKFGVISIHELENRQCLSDLGDENDLVLNSYSIIRSESGDLHLQNIYEECNRIVAENKSIKKVTGKLINDVNKVAL
QSEVLCQTIESGAIEEYERVDSILPFIDKSGVETTKRNINVGTALESLTDYWEKTKSVSKCLTEYSPESINEMKKRARLL
VEAVEELEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37270; Mature: 37138

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTINDNKQTKKKVQNSNKATKQRRGFGSICPSIDSTTDIDCDGNVRQVEYEVISEQTLA
CCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ISKVSIEEGGLISAKGGESSLLSSVLHGLVNLENNRTYLSDERISKWGRLCNEALKFKRI
HEEEEECCCCEEEECCCHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHEE
VIYMSVELDLPQTIGMTQRAYFEKYFNFADYEVSKTLRNVQTLVLLKFGVISIHELENRQ
EEEEEEEECCCHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLSDLGDENDLVLNSYSIIRSESGDLHLQNIYEECNRIVAENKSIKKVTGKLINDVNKVA
HHHHCCCCCCEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LQSEVLCQTIESGAIEEYERVDSILPFIDKSGVETTKRNINVGTALESLTDYWEKTKSVS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHH
KCLTEYSPESINEMKKRARLLVEAVEELEN
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PTINDNKQTKKKVQNSNKATKQRRGFGSICPSIDSTTDIDCDGNVRQVEYEVISEQTLA
CCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ISKVSIEEGGLISAKGGESSLLSSVLHGLVNLENNRTYLSDERISKWGRLCNEALKFKRI
HEEEEECCCCEEEECCCHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHEE
VIYMSVELDLPQTIGMTQRAYFEKYFNFADYEVSKTLRNVQTLVLLKFGVISIHELENRQ
EEEEEEEECCCHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLSDLGDENDLVLNSYSIIRSESGDLHLQNIYEECNRIVAENKSIKKVTGKLINDVNKVA
HHHHCCCCCCEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LQSEVLCQTIESGAIEEYERVDSILPFIDKSGVETTKRNINVGTALESLTDYWEKTKSVS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHH
KCLTEYSPESINEMKKRARLLVEAVEELEN
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA