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The map label for this gene is rdoA [H]

Identifier: 167625886

GI number: 167625886

Start: 4852342

End: 4853370

Strand: Reverse

Name: rdoA [H]

Synonym: Shal_3981

Alternate gene names: 167625886

Gene position: 4853370-4852342 (Counterclockwise)

Preceding gene: 167625887

Following gene: 167625885

Centisome position: 92.85

GC content: 48.79

Gene sequence:

>1029_bases
ATGAATATCGATCCACCTAAAGCGGCAATGGAGCAAGACTCAGGCTCGGCTTTTCACTATCAAGCCCTGACGCCTGATCT
GATTTTAACCGCCATTGAAACCTTAGGGATCTACCCTGAAACTGGGCTGTTAGCACTCAATAGCTACGAGAACCGTGTTT
ATCAGTTCCGCTGTGATAGGGGTCAACGTTATGTGGTGAAGTTTTATCGCCCTGAGCGCTGGACGGATGCACAAATTCAA
GAGGAGCATGACTTTGCAGCTGCACTTGCAGAGCAAGAGGTGCCCATCGCCACGCCAGTGATTATTGACGGTAAATCGCT
CCATGAATATCAAGGCTTTAGGTTTGCACTGTTTCATTCCATAGGTGGGCGTGCCTTTGAAGTTGATAATCTCGATCAGC
TAGAGCAGGTGGGGCGCTTTATCGGTCGCATCCATCAGTACTCTCAGCAGGCCGATTTTAAATACCGCGATGTGATGTCA
CCTAAGTTACTGGGTGAGGAGTCATTAACTTGGCTTAAAGCTTCGGGCCATATTCCTGCTAGCTTGGAATTACCTTACTT
TACTGTGGTGGAACAGATATTAGAAAAAGCTTCGGCGCTATGGTTACCCGAGAATTACCGCTCAATCAGGCTCCACGGCG
ACCTGCATCCGAGCAATATATTGTGGACGCCAGATGGTCCAGGTTTTGTCGATCTCGATGACGCCAAGATGGGACCCGCT
GTACAAGATATCTGGATGCTGCTCGCCGGAGATAGGCCGCAGCAGTTATTACAACTTGAGATCTTGCTCGAAGGGTATGA
GGAGTTCTGTGAGTTTGATAGTCGCGAGCTTAAGCTGATAGAGCCACTTAGAGCGATGCGTATGCTGCACTACAACGCTT
GGCTCAGTCGCCGCTGGGGCGATCCCGCCTTTCCGATGAACTTCCCTTGGTTTGCTGAGGACAAGTATTGGGAACAGCAG
ATTTTAGCTTTTAAGGAGCAATTAGCTGCATTGGATGAGCCCCCATTAAGCTTAATTCCTCAGTATTAA

Upstream 100 bases:

>100_bases
ATTAAAAATTTAGGCTTAACTTACCGGCATGACTAAATAAGCATGAATTTATTTTATAATTTGAAGGTCAATCTAGGCTT
TCACCATTGAGCATAATCAA

Downstream 100 bases:

>100_bases
AACAGCTGAAGGCACTTATTTTGTAACAGAAAAATGAACTTTTGCGCTTGAGGTCAACTCCAAAGCACATTATGTTATAT
CCAAATTATTAGCGTGATGC

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MNIDPPKAAMEQDSGSAFHYQALTPDLILTAIETLGIYPETGLLALNSYENRVYQFRCDRGQRYVVKFYRPERWTDAQIQ
EEHDFAAALAEQEVPIATPVIIDGKSLHEYQGFRFALFHSIGGRAFEVDNLDQLEQVGRFIGRIHQYSQQADFKYRDVMS
PKLLGEESLTWLKASGHIPASLELPYFTVVEQILEKASALWLPENYRSIRLHGDLHPSNILWTPDGPGFVDLDDAKMGPA
VQDIWMLLAGDRPQQLLQLEILLEGYEEFCEFDSRELKLIEPLRAMRMLHYNAWLSRRWGDPAFPMNFPWFAEDKYWEQQ
ILAFKEQLAALDEPPLSLIPQY

Sequences:

>Translated_342_residues
MNIDPPKAAMEQDSGSAFHYQALTPDLILTAIETLGIYPETGLLALNSYENRVYQFRCDRGQRYVVKFYRPERWTDAQIQ
EEHDFAAALAEQEVPIATPVIIDGKSLHEYQGFRFALFHSIGGRAFEVDNLDQLEQVGRFIGRIHQYSQQADFKYRDVMS
PKLLGEESLTWLKASGHIPASLELPYFTVVEQILEKASALWLPENYRSIRLHGDLHPSNILWTPDGPGFVDLDDAKMGPA
VQDIWMLLAGDRPQQLLQLEILLEGYEEFCEFDSRELKLIEPLRAMRMLHYNAWLSRRWGDPAFPMNFPWFAEDKYWEQQ
ILAFKEQLAALDEPPLSLIPQY
>Mature_342_residues
MNIDPPKAAMEQDSGSAFHYQALTPDLILTAIETLGIYPETGLLALNSYENRVYQFRCDRGQRYVVKFYRPERWTDAQIQ
EEHDFAAALAEQEVPIATPVIIDGKSLHEYQGFRFALFHSIGGRAFEVDNLDQLEQVGRFIGRIHQYSQQADFKYRDVMS
PKLLGEESLTWLKASGHIPASLELPYFTVVEQILEKASALWLPENYRSIRLHGDLHPSNILWTPDGPGFVDLDDAKMGPA
VQDIWMLLAGDRPQQLLQLEILLEGYEEFCEFDSRELKLIEPLRAMRMLHYNAWLSRRWGDPAFPMNFPWFAEDKYWEQQ
ILAFKEQLAALDEPPLSLIPQY

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=329, Percent_Identity=51.3677811550152, Blast_Score=345, Evalue=2e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 39554; Mature: 39554

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIDPPKAAMEQDSGSAFHYQALTPDLILTAIETLGIYPETGLLALNSYENRVYQFRCDR
CCCCCCCHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECC
GQRYVVKFYRPERWTDAQIQEEHDFAAALAEQEVPIATPVIIDGKSLHEYQGFRFALFHS
CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHCCCEEEEEHH
IGGRAFEVDNLDQLEQVGRFIGRIHQYSQQADFKYRDVMSPKLLGEESLTWLKASGHIPA
CCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHCCCCCCEEEEECCCCCC
SLELPYFTVVEQILEKASALWLPENYRSIRLHGDLHPSNILWTPDGPGFVDLDDAKMGPA
CCCCCHHHHHHHHHHHHHEECCCCCCCEEEEECCCCCCCEEECCCCCCEEECCCCCCCCH
VQDIWMLLAGDRPQQLLQLEILLEGYEEFCEFDSRELKLIEPLRAMRMLHYNAWLSRRWG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
DPAFPMNFPWFAEDKYWEQQILAFKEQLAALDEPPLSLIPQY
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCC
>Mature Secondary Structure
MNIDPPKAAMEQDSGSAFHYQALTPDLILTAIETLGIYPETGLLALNSYENRVYQFRCDR
CCCCCCCHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECC
GQRYVVKFYRPERWTDAQIQEEHDFAAALAEQEVPIATPVIIDGKSLHEYQGFRFALFHS
CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHCCCEEEEEHH
IGGRAFEVDNLDQLEQVGRFIGRIHQYSQQADFKYRDVMSPKLLGEESLTWLKASGHIPA
CCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHCCCCCCEEEEECCCCCC
SLELPYFTVVEQILEKASALWLPENYRSIRLHGDLHPSNILWTPDGPGFVDLDDAKMGPA
CCCCCHHHHHHHHHHHHHEECCCCCCCEEEEECCCCCCCEEECCCCCCEEECCCCCCCCH
VQDIWMLLAGDRPQQLLQLEILLEGYEEFCEFDSRELKLIEPLRAMRMLHYNAWLSRRWG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
DPAFPMNFPWFAEDKYWEQQILAFKEQLAALDEPPLSLIPQY
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]