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The map label for this gene is 167625756

Identifier: 167625756

GI number: 167625756

Start: 4672481

End: 4673773

Strand: Reverse

Name: 167625756

Synonym: Shal_3851

Alternate gene names: NA

Gene position: 4673773-4672481 (Counterclockwise)

Preceding gene: 167625757

Following gene: 167625755

Centisome position: 89.42

GC content: 48.11

Gene sequence:

>1293_bases
ATGAGCGTAATCAACAAAATGCTCAAAGATCTAGATAAGCGCCAACAGCCCCATGGGTTGGAAAGTATGGCTACACCGCA
AATAGCGCACAAAGCTAACGCGATGTCGAAGCGCCCCTTGGTGCTAACGAGTCTATTGTCATTAGTCATCGGAGGCTTGG
TGGTCTTTTTGGCTACAGGTTTGTTGCAGCCCAATGCTGAGGCTGATTCACAGGCTAATCAAATGAGTGCCCAGTCGTCC
ACATCAACGAGTGACGTGAAGAAACTGCTTGAGAGTTCAAAGAGCGATGGCACATTAGTGAAGACTAAAGCTGAGGTGTC
AGTTGAGCCTAAACTCGGTGTTACAGTATTAACCCCGTCTCAAAAAGCGCCAACGATACAAACGTCGACGATAGCGGCCT
CTACAGTATCAGAAGCCACTAAGACTAAATCGTCAGTACCAACAGAGGCGACTACGCAGGTTATTGGCAGGAGTGAGCCT
ACGGTTAAGCAAGCTGATGTTGTTAAGTCTGCAAGCTCATTACAAGCTAACACGAGGCCTGATGAGCAGAATAAACGACA
AACCATTCAAAATCGCTCGAGCTCAGATAAAACACAGCATGCAGTAGCCAATGAGGCCGCGGCGTCGACCGTGAAGATGA
GTGTTGCACCAGCCAGTAAACGTTCGAGCGAGCTGTATAGTAGCGGTAATATGGCGGTCAAAGAGGTGAAGTTGTCCCCA
GAACAGCTCGCCCAGAAACAGATGATGTTGGCAACTGATGCACAGCAGCAAGGGCTGCATAGTGATGCATTAACCTATTA
TGAAGCGGCGCTCGCGTATAACCCTGCACTGCACCAAGCCAGAAGGCTGGCGGCTGCTTTATATTACGGTCAAAATAAAT
TAGCTCAAGCAGCCAAGCTACTAGAGCAAGGCCAGTTACTATTCCCACAAGAGTATGAGTTTTCGTTGTTACTCGCTCGA
GTTCAGCAGGCGGCAGGCCAAAACGAACAAGCTCTTAAGAGCTTAGCGATGATCCCCGATGCCAGTGAATTAGCGATTAA
AAAATGGCACCAGCAAAGTGATTTAGCTCAAAAGCAGCAGGATTACCCCGTGGCGGAGCAAAGCTTTCGTCAGCTAGCTA
AGCATGAGCCATATCAAGGACGCTGGTGGATGGGTTTAGGTTATGCGTTAGATGCCCAGCAAAAATATACCGAGGCGAAA
TTGGCGTATAACCAAGCTTTGTCACAAGGTAATTTGTCTGCACAGGCTAAAGTTTACGTCGATAATCGATTGCTGCAGTT
AGGAGCGTACTAG

Upstream 100 bases:

>100_bases
CTATGACGAGTCAAGCTTTAGTCGTTAAATGGGCTATCGCCATCACTGTGATAGCAGGCATTTCAGTCAGCGTACTTTAT
TGGTTTAAAGGAGGCGTAAT

Downstream 100 bases:

>100_bases
TGAAACCCAAGTTAAAAATGCGATTAGGTGATCTGCTTGTTCAAGAGCACATCATCACCGAAGATCAATTACAACAAGCA
TTGAGTGAACAGCGTAATAC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: MSHA Biogenesis Protein MshN; TPR Domain-Containing Protein; Type IV Pilus Mannose-Sensitive Hemagglutinin D; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MSVINKMLKDLDKRQQPHGLESMATPQIAHKANAMSKRPLVLTSLLSLVIGGLVVFLATGLLQPNAEADSQANQMSAQSS
TSTSDVKKLLESSKSDGTLVKTKAEVSVEPKLGVTVLTPSQKAPTIQTSTIAASTVSEATKTKSSVPTEATTQVIGRSEP
TVKQADVVKSASSLQANTRPDEQNKRQTIQNRSSSDKTQHAVANEAAASTVKMSVAPASKRSSELYSSGNMAVKEVKLSP
EQLAQKQMMLATDAQQQGLHSDALTYYEAALAYNPALHQARRLAAALYYGQNKLAQAAKLLEQGQLLFPQEYEFSLLLAR
VQQAAGQNEQALKSLAMIPDASELAIKKWHQQSDLAQKQQDYPVAEQSFRQLAKHEPYQGRWWMGLGYALDAQQKYTEAK
LAYNQALSQGNLSAQAKVYVDNRLLQLGAY

Sequences:

>Translated_430_residues
MSVINKMLKDLDKRQQPHGLESMATPQIAHKANAMSKRPLVLTSLLSLVIGGLVVFLATGLLQPNAEADSQANQMSAQSS
TSTSDVKKLLESSKSDGTLVKTKAEVSVEPKLGVTVLTPSQKAPTIQTSTIAASTVSEATKTKSSVPTEATTQVIGRSEP
TVKQADVVKSASSLQANTRPDEQNKRQTIQNRSSSDKTQHAVANEAAASTVKMSVAPASKRSSELYSSGNMAVKEVKLSP
EQLAQKQMMLATDAQQQGLHSDALTYYEAALAYNPALHQARRLAAALYYGQNKLAQAAKLLEQGQLLFPQEYEFSLLLAR
VQQAAGQNEQALKSLAMIPDASELAIKKWHQQSDLAQKQQDYPVAEQSFRQLAKHEPYQGRWWMGLGYALDAQQKYTEAK
LAYNQALSQGNLSAQAKVYVDNRLLQLGAY
>Mature_429_residues
SVINKMLKDLDKRQQPHGLESMATPQIAHKANAMSKRPLVLTSLLSLVIGGLVVFLATGLLQPNAEADSQANQMSAQSST
STSDVKKLLESSKSDGTLVKTKAEVSVEPKLGVTVLTPSQKAPTIQTSTIAASTVSEATKTKSSVPTEATTQVIGRSEPT
VKQADVVKSASSLQANTRPDEQNKRQTIQNRSSSDKTQHAVANEAAASTVKMSVAPASKRSSELYSSGNMAVKEVKLSPE
QLAQKQMMLATDAQQQGLHSDALTYYEAALAYNPALHQARRLAAALYYGQNKLAQAAKLLEQGQLLFPQEYEFSLLLARV
QQAAGQNEQALKSLAMIPDASELAIKKWHQQSDLAQKQQDYPVAEQSFRQLAKHEPYQGRWWMGLGYALDAQQKYTEAKL
AYNQALSQGNLSAQAKVYVDNRLLQLGAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46701; Mature: 46570

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVINKMLKDLDKRQQPHGLESMATPQIAHKANAMSKRPLVLTSLLSLVIGGLVVFLATG
CHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LLQPNAEADSQANQMSAQSSTSTSDVKKLLESSKSDGTLVKTKAEVSVEPKLGVTVLTPS
CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEECCEEECCCCCEEEECCC
QKAPTIQTSTIAASTVSEATKTKSSVPTEATTQVIGRSEPTVKQADVVKSASSLQANTRP
CCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC
DEQNKRQTIQNRSSSDKTQHAVANEAAASTVKMSVAPASKRSSELYSSGNMAVKEVKLSP
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCCCEEEEEECCH
EQLAQKQMMLATDAQQQGLHSDALTYYEAALAYNPALHQARRLAAALYYGQNKLAQAAKL
HHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHHHHHHH
LEQGQLLFPQEYEFSLLLARVQQAAGQNEQALKSLAMIPDASELAIKKWHQQSDLAQKQQ
HHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
DYPVAEQSFRQLAKHEPYQGRWWMGLGYALDAQQKYTEAKLAYNQALSQGNLSAQAKVYV
CCCHHHHHHHHHHHCCCCCCEEEEECCEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEEE
DNRLLQLGAY
CCHHHHHCCC
>Mature Secondary Structure 
SVINKMLKDLDKRQQPHGLESMATPQIAHKANAMSKRPLVLTSLLSLVIGGLVVFLATG
HHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LLQPNAEADSQANQMSAQSSTSTSDVKKLLESSKSDGTLVKTKAEVSVEPKLGVTVLTPS
CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEECCEEECCCCCEEEECCC
QKAPTIQTSTIAASTVSEATKTKSSVPTEATTQVIGRSEPTVKQADVVKSASSLQANTRP
CCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC
DEQNKRQTIQNRSSSDKTQHAVANEAAASTVKMSVAPASKRSSELYSSGNMAVKEVKLSP
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCCCEEEEEECCH
EQLAQKQMMLATDAQQQGLHSDALTYYEAALAYNPALHQARRLAAALYYGQNKLAQAAKL
HHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHHHHHHH
LEQGQLLFPQEYEFSLLLARVQQAAGQNEQALKSLAMIPDASELAIKKWHQQSDLAQKQQ
HHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
DYPVAEQSFRQLAKHEPYQGRWWMGLGYALDAQQKYTEAKLAYNQALSQGNLSAQAKVYV
CCCHHHHHHHHHHHCCCCCCEEEEECCEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEEE
DNRLLQLGAY
CCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA