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The map label for this gene is ytfL [C]

Identifier: 167625668

GI number: 167625668

Start: 4569289

End: 4570584

Strand: Reverse

Name: ytfL [C]

Synonym: Shal_3763

Alternate gene names: 167625668

Gene position: 4570584-4569289 (Counterclockwise)

Preceding gene: 167625671

Following gene: 167625667

Centisome position: 87.44

GC content: 46.68

Gene sequence:

>1296_bases
ATGGACGTGTTGATCTTAATGGCGCTTATTCTTCTTAACGGGGTGTTTGCGATGTCTGAAATTGCACTGGTTTCAGCCCG
CAATAGCCGTTTACAAAAGCTTGCCGATAAAGGAGATAGTGGCGCTGCTAATGCGATTATACTTAAACAAGATCCCACTC
GATTTCTATCTACAGTACAGATTGGCATAACGACCATAGGCCTGCTTAATGGTATCTATGGTGAGGCGGCACTGGCGGCA
CCATTAGCCGAGTATCTAACTTCGTGGGGAGTATCTTCAAAAACGGCCTCTATGGCTTCAACCGTTATTGTTGTTCTGGG
GATCACTTATCTATCTATTGTCATTGGTGAACTGGTTCCCAAAAGACTAGCCCAGCTCCATCCCGAACTTTTTGCCCGCC
TAGTTGCTAGGCCACTCACCTTTCTAGCCATGCTATCTCGCCCCTTTGTGACGCTACTGGCCTGGTCGACAGATCTCATG
CTTAAGCTTCTGGGTAAAGGTCGTGGAAGCGGTGAAGAAACCATCACTGAAGAAGATATTTTTGCCCTGTTAATGGAAGG
ATCACGCAGTGGTAGCATTGCGCCTCATGAACGAGATATGGTGCGTAATGTCTTCCATCTCGATGACCGTAAGGTGTCAT
CTTTACTCACCCCCCGCAGCGACATCATAGCCTTTGATTTAAGTAAGCCTATAGATAGCAATCTAACATCTTTGCTAGCC
TCAGAGCATGATCGCTTTCCCATCATTGATAGAGAGATAGATAACCCCATTGGCGTGCTATCTGCAAATAAGCTACTGAA
AATAAAAATATCAGGAGTACTGGATAATGCCGCAATAAAGTCAGCAGCATTTCCGCCCGTCTTTATTCCAGAGAGCTGGA
GCGGTAGTCAGCTATTGGCTTTTTTTCGTCACACAGGTGAACATATAGCCTTTATTGTCGATGAATATGGCGATCTGCAA
GGCATAGTGACCCATACCGACCTGCTTGAAGCGTTGGCTGGTGAGTTTAAATCTGCTTCACCCGATGATATCGGATCCAA
GCTACACGCTGATGGCAGCTGGACCATTAATGGACTTATCTCTATTTTGGTCCTCAAAGAACTCCTAGAGTTAGACGCCC
TTCCCGATGAGGAGCTGCATGGCTACCACATCCTTAGCGGCATGATGATGTGGTGTCTAGATAGCATGCCCAAGGTTGGA
GATGTATTTGTGTGGGAGCAGTGGCGCTTTACAGTGTTAACGCTTGATGGCAATCGGCCCGATAAGATTGAGGTGACGCC
AGTTCCAAAAAGTTAG

Upstream 100 bases:

>100_bases
TGCCGATTGGTATTAACTGTACAGGCTTCAAACAAATACTTTGCCTTTAACGTAGCTTAGTGCAAAGTTAACGAGTCGCT
TGTATTTTTAAGGAACTTGC

Downstream 100 bases:

>100_bases
TTAATCATAGACATATGGGCGCTCCCGGTTAGTCAAGATGATTATTAATGGGTGGCTTAGCTGTTTGGTTTTTATTTCAA
AATCTTATCCTTATCTCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MDVLILMALILLNGVFAMSEIALVSARNSRLQKLADKGDSGAANAIILKQDPTRFLSTVQIGITTIGLLNGIYGEAALAA
PLAEYLTSWGVSSKTASMASTVIVVLGITYLSIVIGELVPKRLAQLHPELFARLVARPLTFLAMLSRPFVTLLAWSTDLM
LKLLGKGRGSGEETITEEDIFALLMEGSRSGSIAPHERDMVRNVFHLDDRKVSSLLTPRSDIIAFDLSKPIDSNLTSLLA
SEHDRFPIIDREIDNPIGVLSANKLLKIKISGVLDNAAIKSAAFPPVFIPESWSGSQLLAFFRHTGEHIAFIVDEYGDLQ
GIVTHTDLLEALAGEFKSASPDDIGSKLHADGSWTINGLISILVLKELLELDALPDEELHGYHILSGMMMWCLDSMPKVG
DVFVWEQWRFTVLTLDGNRPDKIEVTPVPKS

Sequences:

>Translated_431_residues
MDVLILMALILLNGVFAMSEIALVSARNSRLQKLADKGDSGAANAIILKQDPTRFLSTVQIGITTIGLLNGIYGEAALAA
PLAEYLTSWGVSSKTASMASTVIVVLGITYLSIVIGELVPKRLAQLHPELFARLVARPLTFLAMLSRPFVTLLAWSTDLM
LKLLGKGRGSGEETITEEDIFALLMEGSRSGSIAPHERDMVRNVFHLDDRKVSSLLTPRSDIIAFDLSKPIDSNLTSLLA
SEHDRFPIIDREIDNPIGVLSANKLLKIKISGVLDNAAIKSAAFPPVFIPESWSGSQLLAFFRHTGEHIAFIVDEYGDLQ
GIVTHTDLLEALAGEFKSASPDDIGSKLHADGSWTINGLISILVLKELLELDALPDEELHGYHILSGMMMWCLDSMPKVG
DVFVWEQWRFTVLTLDGNRPDKIEVTPVPKS
>Mature_431_residues
MDVLILMALILLNGVFAMSEIALVSARNSRLQKLADKGDSGAANAIILKQDPTRFLSTVQIGITTIGLLNGIYGEAALAA
PLAEYLTSWGVSSKTASMASTVIVVLGITYLSIVIGELVPKRLAQLHPELFARLVARPLTFLAMLSRPFVTLLAWSTDLM
LKLLGKGRGSGEETITEEDIFALLMEGSRSGSIAPHERDMVRNVFHLDDRKVSSLLTPRSDIIAFDLSKPIDSNLTSLLA
SEHDRFPIIDREIDNPIGVLSANKLLKIKISGVLDNAAIKSAAFPPVFIPESWSGSQLLAFFRHTGEHIAFIVDEYGDLQ
GIVTHTDLLEALAGEFKSASPDDIGSKLHADGSWTINGLISILVLKELLELDALPDEELHGYHILSGMMMWCLDSMPKVG
DVFVWEQWRFTVLTLDGNRPDKIEVTPVPKS

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=372, Percent_Identity=27.4193548387097, Blast_Score=143, Evalue=3e-34,
Organism=Escherichia coli, GI1790664, Length=436, Percent_Identity=28.2110091743119, Blast_Score=190, Evalue=1e-49,
Organism=Escherichia coli, GI87082033, Length=363, Percent_Identity=26.1707988980716, Blast_Score=124, Evalue=9e-30,
Organism=Escherichia coli, GI145693175, Length=417, Percent_Identity=24.9400479616307, Blast_Score=121, Evalue=1e-28,
Organism=Escherichia coli, GI1788119, Length=276, Percent_Identity=28.2608695652174, Blast_Score=99, Evalue=7e-22,
Organism=Escherichia coli, GI1786879, Length=265, Percent_Identity=26.4150943396226, Blast_Score=95, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 47034; Mature: 47034

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVLILMALILLNGVFAMSEIALVSARNSRLQKLADKGDSGAANAIILKQDPTRFLSTVQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHH
IGITTIGLLNGIYGEAALAAPLAEYLTSWGVSSKTASMASTVIVVLGITYLSIVIGELVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRLAQLHPELFARLVARPLTFLAMLSRPFVTLLAWSTDLMLKLLGKGRGSGEETITEEDI
HHHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
FALLMEGSRSGSIAPHERDMVRNVFHLDDRKVSSLLTPRSDIIAFDLSKPIDSNLTSLLA
HHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH
SEHDRFPIIDREIDNPIGVLSANKLLKIKISGVLDNAAIKSAAFPPVFIPESWSGSQLLA
CCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCHHHHHHHHCCCCCEECCCCCCCHHHHH
FFRHTGEHIAFIVDEYGDLQGIVTHTDLLEALAGEFKSASPDDIGSKLHADGSWTINGLI
HHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEHHHHH
SILVLKELLELDALPDEELHGYHILSGMMMWCLDSMPKVGDVFVWEQWRFTVLTLDGNRP
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECEEEEEEEECCCCC
DKIEVTPVPKS
CEEEEECCCCC
>Mature Secondary Structure
MDVLILMALILLNGVFAMSEIALVSARNSRLQKLADKGDSGAANAIILKQDPTRFLSTVQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHH
IGITTIGLLNGIYGEAALAAPLAEYLTSWGVSSKTASMASTVIVVLGITYLSIVIGELVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRLAQLHPELFARLVARPLTFLAMLSRPFVTLLAWSTDLMLKLLGKGRGSGEETITEEDI
HHHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
FALLMEGSRSGSIAPHERDMVRNVFHLDDRKVSSLLTPRSDIIAFDLSKPIDSNLTSLLA
HHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH
SEHDRFPIIDREIDNPIGVLSANKLLKIKISGVLDNAAIKSAAFPPVFIPESWSGSQLLA
CCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCHHHHHHHHCCCCCEECCCCCCCHHHHH
FFRHTGEHIAFIVDEYGDLQGIVTHTDLLEALAGEFKSASPDDIGSKLHADGSWTINGLI
HHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEHHHHH
SILVLKELLELDALPDEELHGYHILSGMMMWCLDSMPKVGDVFVWEQWRFTVLTLDGNRP
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECEEEEEEEECCCCC
DKIEVTPVPKS
CEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]