Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is 167625616

Identifier: 167625616

GI number: 167625616

Start: 4509025

End: 4509828

Strand: Reverse

Name: 167625616

Synonym: Shal_3711

Alternate gene names: NA

Gene position: 4509828-4509025 (Counterclockwise)

Preceding gene: 167625617

Following gene: 167625603

Centisome position: 86.28

GC content: 49.0

Gene sequence:

>804_bases
ATGGAAACAATGATGAAAAAATGGCTCTTCGTTTCACTGCTAACTCTGCCACTTGCGGCCAATGCTAACCCAATTGAACT
AAGAGCGGCAGGCAGCTTAAAAAATGCCATGACTGATATCGTCAGTGCCTACCAGCAGGTTGGAACACAAAAAGTACATG
CTGATTTTGGGCCATCTGGGCTGCTTAGAAAGCGCATCGAAAACGGTGACAAGGTTGGCGTGTTTGCCTCTGCGAATATG
AAACACCCACTGGCATTACAAGCTGAAGGTAAGGGCGGCAGTGTGGTGATGTTTGCTCGCAACCAGATGTGCGCGCTAGC
GCAGCCGAGCGTCAATATCAACAGTGAGGGCGTGTTAGCTGCGATGCTTGATCCTAATGTGCGATTAGGCACCTCTACAC
CTAAAGCTGACCCTTCTGGTGACTATGCGTGGAAAATATTTGCTAAAGCTGACCACTTGCAAGCCGGCGCGACTGCAAAG
CTAGAAGCCAAAGCCTTGCAACTCACTGGCGGTGAAAATAGTGCTAAAGCACCTAAAGGCCGTAATACCTATGGCTGGGT
GATGGAGAATAAACGCGCCGACCTGTTTTTAACCTATTGCACCAATGCGGTACTGGCTCAGAAAGAGGTCAAAGACTTAC
AAGTGGTGCAGATGCCTGCACCGTTAGCGGTTGGGGCTAATTATGGTTTAATTGTGCTTGATGATGCTCAAGCCGATGCG
TGGAAGCTGGCGATGTTTATTCTGTCAGAGCCAGGTCAAACCATTCTTGCTGACTACGGATTTGATGCACCGCTAAAGCC
TTAG

Upstream 100 bases:

>100_bases
AACTAGAGTTAACTTGCTAAAAGGCAAGTATTGTTATTTGGCTAGAGATGCTTTTTCATTGCCTAAAGTAAGTTCATCTA
GATAATGATTAATACAGATA

Downstream 100 bases:

>100_bases
ACAGCAAAAAGGCCGCGAAAGCGGCCTTTTGTTTTAACTTATTCAACAAATCGTAACTAGTGCATCAAGAAAATGGTTGC
TAGACCTAGGAAGGCAAATA

Product: molybdate ABC transporter periplasmic molybdate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
METMMKKWLFVSLLTLPLAANANPIELRAAGSLKNAMTDIVSAYQQVGTQKVHADFGPSGLLRKRIENGDKVGVFASANM
KHPLALQAEGKGGSVVMFARNQMCALAQPSVNINSEGVLAAMLDPNVRLGTSTPKADPSGDYAWKIFAKADHLQAGATAK
LEAKALQLTGGENSAKAPKGRNTYGWVMENKRADLFLTYCTNAVLAQKEVKDLQVVQMPAPLAVGANYGLIVLDDAQADA
WKLAMFILSEPGQTILADYGFDAPLKP

Sequences:

>Translated_267_residues
METMMKKWLFVSLLTLPLAANANPIELRAAGSLKNAMTDIVSAYQQVGTQKVHADFGPSGLLRKRIENGDKVGVFASANM
KHPLALQAEGKGGSVVMFARNQMCALAQPSVNINSEGVLAAMLDPNVRLGTSTPKADPSGDYAWKIFAKADHLQAGATAK
LEAKALQLTGGENSAKAPKGRNTYGWVMENKRADLFLTYCTNAVLAQKEVKDLQVVQMPAPLAVGANYGLIVLDDAQADA
WKLAMFILSEPGQTILADYGFDAPLKP
>Mature_267_residues
METMMKKWLFVSLLTLPLAANANPIELRAAGSLKNAMTDIVSAYQQVGTQKVHADFGPSGLLRKRIENGDKVGVFASANM
KHPLALQAEGKGGSVVMFARNQMCALAQPSVNINSEGVLAAMLDPNVRLGTSTPKADPSGDYAWKIFAKADHLQAGATAK
LEAKALQLTGGENSAKAPKGRNTYGWVMENKRADLFLTYCTNAVLAQKEVKDLQVVQMPAPLAVGANYGLIVLDDAQADA
WKLAMFILSEPGQTILADYGFDAPLKP

Specific function: Unknown

COG id: COG0725

COG function: function code P; ABC-type molybdate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28546; Mature: 28546

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METMMKKWLFVSLLTLPLAANANPIELRAAGSLKNAMTDIVSAYQQVGTQKVHADFGPSG
CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCEEEECCCCCHH
LLRKRIENGDKVGVFASANMKHPLALQAEGKGGSVVMFARNQMCALAQPSVNINSEGVLA
HHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCEEEEEECCCEEEECCCCCCCCCCCEEE
AMLDPNVRLGTSTPKADPSGDYAWKIFAKADHLQAGATAKLEAKALQLTGGENSAKAPKG
EEECCCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCC
RNTYGWVMENKRADLFLTYCTNAVLAQKEVKDLQVVQMPAPLAVGANYGLIVLDDAQADA
CCCEEEEEECCCCCEEEEECCCHHHHHHHHCCEEEEECCCCEEECCCCCEEEEECCCCCH
WKLAMFILSEPGQTILADYGFDAPLKP
HEEEEEEECCCCCEEEEECCCCCCCCC
>Mature Secondary Structure
METMMKKWLFVSLLTLPLAANANPIELRAAGSLKNAMTDIVSAYQQVGTQKVHADFGPSG
CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCEEEECCCCCHH
LLRKRIENGDKVGVFASANMKHPLALQAEGKGGSVVMFARNQMCALAQPSVNINSEGVLA
HHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCEEEEEECCCEEEECCCCCCCCCCCEEE
AMLDPNVRLGTSTPKADPSGDYAWKIFAKADHLQAGATAKLEAKALQLTGGENSAKAPKG
EEECCCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCC
RNTYGWVMENKRADLFLTYCTNAVLAQKEVKDLQVVQMPAPLAVGANYGLIVLDDAQADA
CCCEEEEEECCCCCEEEEECCCHHHHHHHHCCEEEEECCCCEEECCCCCEEEEECCCCCH
WKLAMFILSEPGQTILADYGFDAPLKP
HEEEEEEECCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]