| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167625616
Identifier: 167625616
GI number: 167625616
Start: 4509025
End: 4509828
Strand: Reverse
Name: 167625616
Synonym: Shal_3711
Alternate gene names: NA
Gene position: 4509828-4509025 (Counterclockwise)
Preceding gene: 167625617
Following gene: 167625603
Centisome position: 86.28
GC content: 49.0
Gene sequence:
>804_bases ATGGAAACAATGATGAAAAAATGGCTCTTCGTTTCACTGCTAACTCTGCCACTTGCGGCCAATGCTAACCCAATTGAACT AAGAGCGGCAGGCAGCTTAAAAAATGCCATGACTGATATCGTCAGTGCCTACCAGCAGGTTGGAACACAAAAAGTACATG CTGATTTTGGGCCATCTGGGCTGCTTAGAAAGCGCATCGAAAACGGTGACAAGGTTGGCGTGTTTGCCTCTGCGAATATG AAACACCCACTGGCATTACAAGCTGAAGGTAAGGGCGGCAGTGTGGTGATGTTTGCTCGCAACCAGATGTGCGCGCTAGC GCAGCCGAGCGTCAATATCAACAGTGAGGGCGTGTTAGCTGCGATGCTTGATCCTAATGTGCGATTAGGCACCTCTACAC CTAAAGCTGACCCTTCTGGTGACTATGCGTGGAAAATATTTGCTAAAGCTGACCACTTGCAAGCCGGCGCGACTGCAAAG CTAGAAGCCAAAGCCTTGCAACTCACTGGCGGTGAAAATAGTGCTAAAGCACCTAAAGGCCGTAATACCTATGGCTGGGT GATGGAGAATAAACGCGCCGACCTGTTTTTAACCTATTGCACCAATGCGGTACTGGCTCAGAAAGAGGTCAAAGACTTAC AAGTGGTGCAGATGCCTGCACCGTTAGCGGTTGGGGCTAATTATGGTTTAATTGTGCTTGATGATGCTCAAGCCGATGCG TGGAAGCTGGCGATGTTTATTCTGTCAGAGCCAGGTCAAACCATTCTTGCTGACTACGGATTTGATGCACCGCTAAAGCC TTAG
Upstream 100 bases:
>100_bases AACTAGAGTTAACTTGCTAAAAGGCAAGTATTGTTATTTGGCTAGAGATGCTTTTTCATTGCCTAAAGTAAGTTCATCTA GATAATGATTAATACAGATA
Downstream 100 bases:
>100_bases ACAGCAAAAAGGCCGCGAAAGCGGCCTTTTGTTTTAACTTATTCAACAAATCGTAACTAGTGCATCAAGAAAATGGTTGC TAGACCTAGGAAGGCAAATA
Product: molybdate ABC transporter periplasmic molybdate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues METMMKKWLFVSLLTLPLAANANPIELRAAGSLKNAMTDIVSAYQQVGTQKVHADFGPSGLLRKRIENGDKVGVFASANM KHPLALQAEGKGGSVVMFARNQMCALAQPSVNINSEGVLAAMLDPNVRLGTSTPKADPSGDYAWKIFAKADHLQAGATAK LEAKALQLTGGENSAKAPKGRNTYGWVMENKRADLFLTYCTNAVLAQKEVKDLQVVQMPAPLAVGANYGLIVLDDAQADA WKLAMFILSEPGQTILADYGFDAPLKP
Sequences:
>Translated_267_residues METMMKKWLFVSLLTLPLAANANPIELRAAGSLKNAMTDIVSAYQQVGTQKVHADFGPSGLLRKRIENGDKVGVFASANM KHPLALQAEGKGGSVVMFARNQMCALAQPSVNINSEGVLAAMLDPNVRLGTSTPKADPSGDYAWKIFAKADHLQAGATAK LEAKALQLTGGENSAKAPKGRNTYGWVMENKRADLFLTYCTNAVLAQKEVKDLQVVQMPAPLAVGANYGLIVLDDAQADA WKLAMFILSEPGQTILADYGFDAPLKP >Mature_267_residues METMMKKWLFVSLLTLPLAANANPIELRAAGSLKNAMTDIVSAYQQVGTQKVHADFGPSGLLRKRIENGDKVGVFASANM KHPLALQAEGKGGSVVMFARNQMCALAQPSVNINSEGVLAAMLDPNVRLGTSTPKADPSGDYAWKIFAKADHLQAGATAK LEAKALQLTGGENSAKAPKGRNTYGWVMENKRADLFLTYCTNAVLAQKEVKDLQVVQMPAPLAVGANYGLIVLDDAQADA WKLAMFILSEPGQTILADYGFDAPLKP
Specific function: Unknown
COG id: COG0725
COG function: function code P; ABC-type molybdate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28546; Mature: 28546
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METMMKKWLFVSLLTLPLAANANPIELRAAGSLKNAMTDIVSAYQQVGTQKVHADFGPSG CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCEEEECCCCCHH LLRKRIENGDKVGVFASANMKHPLALQAEGKGGSVVMFARNQMCALAQPSVNINSEGVLA HHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCEEEEEECCCEEEECCCCCCCCCCCEEE AMLDPNVRLGTSTPKADPSGDYAWKIFAKADHLQAGATAKLEAKALQLTGGENSAKAPKG EEECCCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCC RNTYGWVMENKRADLFLTYCTNAVLAQKEVKDLQVVQMPAPLAVGANYGLIVLDDAQADA CCCEEEEEECCCCCEEEEECCCHHHHHHHHCCEEEEECCCCEEECCCCCEEEEECCCCCH WKLAMFILSEPGQTILADYGFDAPLKP HEEEEEEECCCCCEEEEECCCCCCCCC >Mature Secondary Structure METMMKKWLFVSLLTLPLAANANPIELRAAGSLKNAMTDIVSAYQQVGTQKVHADFGPSG CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCEEEECCCCCHH LLRKRIENGDKVGVFASANMKHPLALQAEGKGGSVVMFARNQMCALAQPSVNINSEGVLA HHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCEEEEEECCCEEEECCCCCCCCCCCEEE AMLDPNVRLGTSTPKADPSGDYAWKIFAKADHLQAGATAKLEAKALQLTGGENSAKAPKG EEECCCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCC RNTYGWVMENKRADLFLTYCTNAVLAQKEVKDLQVVQMPAPLAVGANYGLIVLDDAQADA CCCEEEEEECCCCCEEEEECCCHHHHHHHHCCEEEEECCCCEEECCCCCEEEEECCCCCH WKLAMFILSEPGQTILADYGFDAPLKP HEEEEEEECCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]