Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is tolQ [C]

Identifier: 167625524

GI number: 167625524

Start: 4413931

End: 4415388

Strand: Reverse

Name: tolQ [C]

Synonym: Shal_3618

Alternate gene names: 167625524

Gene position: 4415388-4413931 (Counterclockwise)

Preceding gene: 167625525

Following gene: 167625523

Centisome position: 84.47

GC content: 48.15

Gene sequence:

>1458_bases
ATGAGAGCAGTGATTTTAGTCTTGTTGTTATGCGTATCGACATTGGGCTTTGCACAAAAGTCAGCTACACAAGAGACAGC
TTCTGTAAAAGGATCTGCAGAATATCAAGCTCTTGAGCGGCGAGTTGACCAGCGAGCCTCTGAGGTAGAGCGACAAAACT
TGCTTTGGAGCAGCAACTTAAAGCAAGAGATCGATGAAGTTAAAACTAATCAGCAGCAGTTGACTAAGCGTTTAAAGACT
AAGCGTGGTCAACTTGAGCAATTGAATCAACAGCTGATTGATTTAAATCAGCAAAAGCAAAGTCTCAGCCAAGATTATCA
GCTTGCTGTTGATGATATGAAGCTGGTTCAAGGCGCCTATCAAAAAGCACTGAGTAGCCTATCGCAACAGTGGCAGCAGA
GTCCTACTCAGTTTGCTGCGCCTCAACGGCTGGAAAACTTAACGCTTGCCAAGGCGAGTTTGGGATTCCCAAGCTTGACC
CAGCTTAATGAGCTTGTCGGCTACGCTGTCGATGATATGCAGATGACGGCGAAAGTGCTAACAGCCAAGGCGCCGATTAG
CTTGGGTGATGGCAGCGTAACGGAGCAAGAGTTACAGGTATTTGGCGGCTTAATGGCGGTGACTAATAATGAACAGCCAA
GCTTTATCGCCTTTACAGAAAAACTACCCATTGCCATATCACCTGTCGATTCACAGATCAGTGAGCAACTAAAGTCTTGG
CTTGATAAGCAGGCTCAGCTATTGCCGCTGGATTTAAGTCAAGGACGAATGCTGCCAAGTCTGGCAGAGAAACAGAGCCT
GACAGAGTGGGTCGAAAACGGCGGAGAGGTGCTATGGCCGATCCTTATCTTAGCCGCGTTGGGATTAGTGGTAGCGCTAT
GGCGGGCAGTAATGCTGTTTTACTGGCGCCCGCTAGCTCAGCTTAGTGACAAGGATGGCACTCAAGTTGACCTGCAAGCT
ATTAAGCTGCAACTTTCAAATATGACAAGGGTGCCAGCGGCCAGCGTACTCGCTAATGCAATCACTAGCTCAAGCACTCA
TTCAAGCACTAACTCAAGCACTAACTCAAACAACCGAGATGGTGGTGTCGAGGCGATGGATCAACGACTGAAGCAATTGA
TGCTAAAGCAGATGGCACAGTTTGAACGCGGGCTTGGCTTTATTGCACTGCTGGCGGCAATGGCTCCGATGCTGGGGTTA
CTCGGCACCGTATCTGGCATGATTGAAACTTTTCAGTCTTTAACGGAGTTTGGTAATAGCGATCCTAAGTTGTTATCTGA
GGGGATCAGTAAGGCTTTGATCACCACTCAAGCGGGATTGCTGGTGGCGCTACCTTTGCTATTACTACATTACCCACTTA
AACGCCGTGCTCAGGCGCTTAGCTTGAATATGGAGCAGCAATCAGCCCTGTTACTCGCCCTTAATCTTGAGCGAGGTGGC
GAGTATGTCACTCGATAG

Upstream 100 bases:

>100_bases
TACCTGTCAATGAGCAAGGAGACTTAAGGTTAGCGATGGCAATAACGTCGAATAAACAGGTTGCCCAGATAGTTAACCTG
CCATTAGGAGCGCAACAATA

Downstream 100 bases:

>100_bases
CTTACTGTTTTCTGTCCGGCAGTTTGGTCATGCCATTCTTGGCTTTATTGAGCTGGGTGGAGTGGTGATGTGGCCGCTGT
TTGCTTGCTGCCTATGGATG

Product: MotA/TolQ/ExbB proton channel

Products: NA

Alternate protein names: Transport Protein lQ; Biopolymer Transport Proteins-Like; Outer Membrane Transport Energization Protein ExbB

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MRAVILVLLLCVSTLGFAQKSATQETASVKGSAEYQALERRVDQRASEVERQNLLWSSNLKQEIDEVKTNQQQLTKRLKT
KRGQLEQLNQQLIDLNQQKQSLSQDYQLAVDDMKLVQGAYQKALSSLSQQWQQSPTQFAAPQRLENLTLAKASLGFPSLT
QLNELVGYAVDDMQMTAKVLTAKAPISLGDGSVTEQELQVFGGLMAVTNNEQPSFIAFTEKLPIAISPVDSQISEQLKSW
LDKQAQLLPLDLSQGRMLPSLAEKQSLTEWVENGGEVLWPILILAALGLVVALWRAVMLFYWRPLAQLSDKDGTQVDLQA
IKLQLSNMTRVPAASVLANAITSSSTHSSTNSSTNSNNRDGGVEAMDQRLKQLMLKQMAQFERGLGFIALLAAMAPMLGL
LGTVSGMIETFQSLTEFGNSDPKLLSEGISKALITTQAGLLVALPLLLLHYPLKRRAQALSLNMEQQSALLLALNLERGG
EYVTR

Sequences:

>Translated_485_residues
MRAVILVLLLCVSTLGFAQKSATQETASVKGSAEYQALERRVDQRASEVERQNLLWSSNLKQEIDEVKTNQQQLTKRLKT
KRGQLEQLNQQLIDLNQQKQSLSQDYQLAVDDMKLVQGAYQKALSSLSQQWQQSPTQFAAPQRLENLTLAKASLGFPSLT
QLNELVGYAVDDMQMTAKVLTAKAPISLGDGSVTEQELQVFGGLMAVTNNEQPSFIAFTEKLPIAISPVDSQISEQLKSW
LDKQAQLLPLDLSQGRMLPSLAEKQSLTEWVENGGEVLWPILILAALGLVVALWRAVMLFYWRPLAQLSDKDGTQVDLQA
IKLQLSNMTRVPAASVLANAITSSSTHSSTNSSTNSNNRDGGVEAMDQRLKQLMLKQMAQFERGLGFIALLAAMAPMLGL
LGTVSGMIETFQSLTEFGNSDPKLLSEGISKALITTQAGLLVALPLLLLHYPLKRRAQALSLNMEQQSALLLALNLERGG
EYVTR
>Mature_485_residues
MRAVILVLLLCVSTLGFAQKSATQETASVKGSAEYQALERRVDQRASEVERQNLLWSSNLKQEIDEVKTNQQQLTKRLKT
KRGQLEQLNQQLIDLNQQKQSLSQDYQLAVDDMKLVQGAYQKALSSLSQQWQQSPTQFAAPQRLENLTLAKASLGFPSLT
QLNELVGYAVDDMQMTAKVLTAKAPISLGDGSVTEQELQVFGGLMAVTNNEQPSFIAFTEKLPIAISPVDSQISEQLKSW
LDKQAQLLPLDLSQGRMLPSLAEKQSLTEWVENGGEVLWPILILAALGLVVALWRAVMLFYWRPLAQLSDKDGTQVDLQA
IKLQLSNMTRVPAASVLANAITSSSTHSSTNSSTNSNNRDGGVEAMDQRLKQLMLKQMAQFERGLGFIALLAAMAPMLGL
LGTVSGMIETFQSLTEFGNSDPKLLSEGISKALITTQAGLLVALPLLLLHYPLKRRAQALSLNMEQQSALLLALNLERGG
EYVTR

Specific function: Involved In The Tonb-Independent Uptake Of Group A Colicins (Colicins A, E1, E2, E3, And K). [C]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786958, Length=121, Percent_Identity=28.9256198347107, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53308; Mature: 53308

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCC
>Mature Secondary Structure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CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA