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The map label for this gene is tonB [C]

Identifier: 167625521

GI number: 167625521

Start: 4412391

End: 4413032

Strand: Reverse

Name: tonB [C]

Synonym: Shal_3615

Alternate gene names: 167625521

Gene position: 4413032-4412391 (Counterclockwise)

Preceding gene: 167625522

Following gene: 167625520

Centisome position: 84.43

GC content: 49.69

Gene sequence:

>642_bases
ATGAATAGAGGACGCGCTCATCAAGTGTTGGTTATCTCTGTGCGGTTAATACTGTCAGTTGCAGTGACAATATTGCTCTG
TTATTACCTGCCTAGCAGTCTCAATGATAATCAACCAAGGCAGTTCTTTAATCAGCAAGCGAAAGAGCTGGAGCTGCCCT
TGCTTCCTCCTGAAAAACCTAAATTACCGACGCCGAAAGAGGTGCAAAGCAAACCTGTGACAGCAAGCGCTGCAACGCCA
GTATCCAGCAGTATACCGATTATGCCATCGGTTGCAGATATGCCGCTGCAGGTGCCGGTTTTGGCTATTCCAACACTTAA
TGGCTTGAGCTTGCCGAGCATTGCGCCTGTGATAGCAGGCATAAAGGATGTGGACAAAGCCCCCGAACTTCTGCGTTTTA
TTCAGCCTAAGATGCCAGTGGCGGGGCGCAAGTTTAAGGGAGGCGGTAGAGTGCTTTTACGGCTTATCGTTGAGGCGGAT
GGCGTCGTGAGTCAGGCACAGGTGCTAGAGGCTAAGCCCAAGCAAGTGTTTGACCAATCAGCAGTAGAGGCGGCGCGCAG
ATGGCGCTTCAAACCTGCAGTTTTGTCTGGTGAAGCGGTGAGGGTCTTTGTTGATGTACCAATTAACTTTAAGGTTAGTT
AA

Upstream 100 bases:

>100_bases
TTGCCGATACCAACTGCCCAACAGGTGTCACTATCAAAGTGTTGGATATTGCCAAGCAGGCTGGGATCAGTTTTAGCTCT
GTGGCGTCAGAGATCCGCTA

Downstream 100 bases:

>100_bases
CGATGAATAACTTAAAATTATCGATGCTGTTGATACTGTTTATCTCACCTTTTATCTCTTCTCTTAGCCATGGGCGAGAA
TTAAATGCTAGCCCTGGACG

Product: TonB family protein

Products: NA

Alternate protein names: NB Protein; NB Domain-Containing Protein

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MNRGRAHQVLVISVRLILSVAVTILLCYYLPSSLNDNQPRQFFNQQAKELELPLLPPEKPKLPTPKEVQSKPVTASAATP
VSSSIPIMPSVADMPLQVPVLAIPTLNGLSLPSIAPVIAGIKDVDKAPELLRFIQPKMPVAGRKFKGGGRVLLRLIVEAD
GVVSQAQVLEAKPKQVFDQSAVEAARRWRFKPAVLSGEAVRVFVDVPINFKVS

Sequences:

>Translated_213_residues
MNRGRAHQVLVISVRLILSVAVTILLCYYLPSSLNDNQPRQFFNQQAKELELPLLPPEKPKLPTPKEVQSKPVTASAATP
VSSSIPIMPSVADMPLQVPVLAIPTLNGLSLPSIAPVIAGIKDVDKAPELLRFIQPKMPVAGRKFKGGGRVLLRLIVEAD
GVVSQAQVLEAKPKQVFDQSAVEAARRWRFKPAVLSGEAVRVFVDVPINFKVS
>Mature_213_residues
MNRGRAHQVLVISVRLILSVAVTILLCYYLPSSLNDNQPRQFFNQQAKELELPLLPPEKPKLPTPKEVQSKPVTASAATP
VSSSIPIMPSVADMPLQVPVLAIPTLNGLSLPSIAPVIAGIKDVDKAPELLRFIQPKMPVAGRKFKGGGRVLLRLIVEAD
GVVSQAQVLEAKPKQVFDQSAVEAARRWRFKPAVLSGEAVRVFVDVPINFKVS

Specific function: Interacts With Outer Membrane Receptor Proteins That Carry Out High-Affinity Binding And Energy Dependent Uptake Into The Periplasmic Space Of Specific Substrates Such As Cobalamin, And Various Iron Compounds (Such As Iron Dicitrate, Enterochelin, Aerobac

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Periplasmic Protein. Anchored To The Cytoplasm Membrane VIa Its N-Terminal Signal-Like Sequence, Spans The Periplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23150; Mature: 23150

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRGRAHQVLVISVRLILSVAVTILLCYYLPSSLNDNQPRQFFNQQAKELELPLLPPEKP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
KLPTPKEVQSKPVTASAATPVSSSIPIMPSVADMPLQVPVLAIPTLNGLSLPSIAPVIAG
CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHH
IKDVDKAPELLRFIQPKMPVAGRKFKGGGRVLLRLIVEADGVVSQAQVLEAKPKQVFDQS
HHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHH
AVEAARRWRFKPAVLSGEAVRVFVDVPINFKVS
HHHHHHHCCCCCCEECCCEEEEEEECCEEEEEC
>Mature Secondary Structure
MNRGRAHQVLVISVRLILSVAVTILLCYYLPSSLNDNQPRQFFNQQAKELELPLLPPEKP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
KLPTPKEVQSKPVTASAATPVSSSIPIMPSVADMPLQVPVLAIPTLNGLSLPSIAPVIAG
CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHH
IKDVDKAPELLRFIQPKMPVAGRKFKGGGRVLLRLIVEADGVVSQAQVLEAKPKQVFDQS
HHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHH
AVEAARRWRFKPAVLSGEAVRVFVDVPINFKVS
HHHHHHHCCCCCCEECCCEEEEEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA