Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167625513

Identifier: 167625513

GI number: 167625513

Start: 4400831

End: 4401631

Strand: Reverse

Name: 167625513

Synonym: Shal_3607

Alternate gene names: NA

Gene position: 4401631-4400831 (Counterclockwise)

Preceding gene: 167625514

Following gene: 167625508

Centisome position: 84.21

GC content: 44.32

Gene sequence:

>801_bases
ATGCACACGAATGTAAACGCACTATTTGAAGCACTTTGGCAAGACTATATAGAAATGACTCCCTCGGCGGCTAAAGTTCA
TCAACTATTGTCTAAAAATGGTGCGATCATCAACGATCATATTGCGCTGCGAACTTTTAATATTGCCAAGGTTAATCTTG
AGGTGTTGGCTGCGCACTTTGAGTCTATCGGCTATGTCGCCAGTGGTGACTATAAATTTGAGGCTAAGAAGCTTAACGCT
AAGCATTTTGAACATCCGGACAGCACACAGCCGAAGGTGTTTATCTCTGAGTTGTTAGTTGACGAGTTTAGCGAAGAGCT
ACAAGCGACGGTTAATGGCTTGATTGAGCAAATCGATCACGCAGCAACCACGGCTGATAACTTCTTGTACTCAGGCCGTC
ACTGGCAGCTTGATACTAAGACCTATGAGGCGCTATTAGCTGAGAGTGAATACGCAGCTTGGGTGGCAGCTTTTGGTTAT
CGAGCCAACCACTTCACAGTATCGATTAATCACCTACCTGATTATGAAACTATATTTGAAGTTAACGATGCCTTAAAAGC
GGCAGGCTTTGTATTGAATGCTGCGGGCGGTGAAGTAAAAGGCAGTGCCGATGTATTACTTGAGCAATCATCGACCATGG
CAGATAGGATCCCAGTTAGCTTCTCAGACGCAGTAGTTAACATTCCTAGCTGTTTTTATGAATTTGCTCTGCGCTATCCT
CAAGCAGACGGAAAGCTTTATACAGGCTTTGTGGCGACTTCTGCGGACAAGATCTTTGAGAGTACTAATGTTAATGCCTA
G

Upstream 100 bases:

>100_bases
CTTTTGTTTATAAGCAAGTTGTATCCCTAAAATGTGTAACGCCGCGTGACTTAAACAAACTAAATAAATAGCTAAGTACG
TAGGTGTAAAAGGAGTTGTA

Downstream 100 bases:

>100_bases
TATTAATGCCTAATGCCTAATGCCTAATGCCTAATGTCAGTGCTTAGTGTGAATCGTTAGTACAAAGCGCTAGCAATGAA
CGCCTTGTATCTTGTAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MHTNVNALFEALWQDYIEMTPSAAKVHQLLSKNGAIINDHIALRTFNIAKVNLEVLAAHFESIGYVASGDYKFEAKKLNA
KHFEHPDSTQPKVFISELLVDEFSEELQATVNGLIEQIDHAATTADNFLYSGRHWQLDTKTYEALLAESEYAAWVAAFGY
RANHFTVSINHLPDYETIFEVNDALKAAGFVLNAAGGEVKGSADVLLEQSSTMADRIPVSFSDAVVNIPSCFYEFALRYP
QADGKLYTGFVATSADKIFESTNVNA

Sequences:

>Translated_266_residues
MHTNVNALFEALWQDYIEMTPSAAKVHQLLSKNGAIINDHIALRTFNIAKVNLEVLAAHFESIGYVASGDYKFEAKKLNA
KHFEHPDSTQPKVFISELLVDEFSEELQATVNGLIEQIDHAATTADNFLYSGRHWQLDTKTYEALLAESEYAAWVAAFGY
RANHFTVSINHLPDYETIFEVNDALKAAGFVLNAAGGEVKGSADVLLEQSSTMADRIPVSFSDAVVNIPSCFYEFALRYP
QADGKLYTGFVATSADKIFESTNVNA
>Mature_266_residues
MHTNVNALFEALWQDYIEMTPSAAKVHQLLSKNGAIINDHIALRTFNIAKVNLEVLAAHFESIGYVASGDYKFEAKKLNA
KHFEHPDSTQPKVFISELLVDEFSEELQATVNGLIEQIDHAATTADNFLYSGRHWQLDTKTYEALLAESEYAAWVAAFGY
RANHFTVSINHLPDYETIFEVNDALKAAGFVLNAAGGEVKGSADVLLEQSSTMADRIPVSFSDAVVNIPSCFYEFALRYP
QADGKLYTGFVATSADKIFESTNVNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29426; Mature: 29426

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTNVNALFEALWQDYIEMTPSAAKVHQLLSKNGAIINDHIALRTFNIAKVNLEVLAAHF
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCEEEEEEEEEEHHHHHHHHHH
ESIGYVASGDYKFEAKKLNAKHFEHPDSTQPKVFISELLVDEFSEELQATVNGLIEQIDH
HHCCEEECCCEEEEHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AATTADNFLYSGRHWQLDTKTYEALLAESEYAAWVAAFGYRANHFTVSINHLPDYETIFE
HHHHHHHHEECCCEEEECHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHH
VNDALKAAGFVLNAAGGEVKGSADVLLEQSSTMADRIPVSFSDAVVNIPSCFYEFALRYP
HHHHHHHHCEEEECCCCCCCCCHHEEEECCCCHHHHCCCCCCHHHEECHHHHHHHHHHCC
QADGKLYTGFVATSADKIFESTNVNA
CCCCCEEEEEEEHHHHHHHHHCCCCC
>Mature Secondary Structure
MHTNVNALFEALWQDYIEMTPSAAKVHQLLSKNGAIINDHIALRTFNIAKVNLEVLAAHF
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCEEEEEEEEEEHHHHHHHHHH
ESIGYVASGDYKFEAKKLNAKHFEHPDSTQPKVFISELLVDEFSEELQATVNGLIEQIDH
HHCCEEECCCEEEEHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AATTADNFLYSGRHWQLDTKTYEALLAESEYAAWVAAFGYRANHFTVSINHLPDYETIFE
HHHHHHHHEECCCEEEECHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHH
VNDALKAAGFVLNAAGGEVKGSADVLLEQSSTMADRIPVSFSDAVVNIPSCFYEFALRYP
HHHHHHHHCEEEECCCCCCCCCHHEEEECCCCHHHHCCCCCCHHHEECHHHHHHHHHHCC
QADGKLYTGFVATSADKIFESTNVNA
CCCCCEEEEEEEHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA