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The map label for this gene is 167625426

Identifier: 167625426

GI number: 167625426

Start: 4290940

End: 4291761

Strand: Reverse

Name: 167625426

Synonym: Shal_3518

Alternate gene names: NA

Gene position: 4291761-4290940 (Counterclockwise)

Preceding gene: 167625429

Following gene: 167625425

Centisome position: 82.11

GC content: 48.3

Gene sequence:

>822_bases
ATGAGTATTAATAGACGTCAGGCGTTAACCAAGATTATCGGATTAAGTACAGCTGCTGCTGGTGCCGCTTTGGTAGGCAC
TTCTGCATTTGCAGCCACCGATGCAGATGGTAACTATCGTTTAGAGATGGGAGAGAAGCTTAAGTATGTGCCGTTAGATG
CGATGGCAACGGCGAAGCTTGCCTATGAAACGGGTGGTGGCTGTATGCATCAGGTGTTCCATTCTATTGTCACTATGCTA
GCGCAATCAAGCAGTGTCGATGCCGACAAATTTGCCACTATTCCAACGGCTCTTGCGGGCTATGGTTGGGCGGGAATCGT
CGGCCAGGGAACCATCTGCGGTAACCTAAATGCGGCAGGCATGTTGATCAATATCTTAGATGACATCAATGGCCAAAATA
GTGCGGTGATCGGTGCATCATTCCGTTATTACGAAACTCAAGACTTACCCCTTTCATCAGATGAATTTGTCGCTGGCATC
GGCTCAACTGCAGAAAAGAGCCTAGAAGTGGGCGCTACATCTATCGCTAATAGTCCTCTGTGTCACTCCTCTATCAGTAA
TTGGTCTGCTGCTTCGGGTAAGGTCTTTAAGGAGAAGGGCGAGCGTTGTAAGCGCCTATCGGCCAGCTTGGCCTATCACA
TTGTAGAGTTACTTAACCGTGCACATGGTGGCGAGGATATTTCTCTTCTACCTGAAGCTAAGCCTTCTGCCGAAACACAA
GCCTGTCAGTCTTGTCACGGTGTAGAAAGCACTATGAGCACAGCAGCTAGTGTGAAGGCAGATATGGAATGTACCACTTG
TCACACAGGGCACTTTAACTAA

Upstream 100 bases:

>100_bases
CATCGAGTCGTTATCCAAAAATTTGAACTCGTTTACTAACCGTAATAGGCCATGAGGCTTATGACCAAAATAAAATAATG
ATGGATATAGGGTGATTATT

Downstream 100 bases:

>100_bases
GGAGTAAGCTATGAAAGTCAAATTACTGAGCGCGCTGTTGGCAAGCTCGATGCTCTTGCTTGGCTGTGGAAGTGACAATG
ATAATGATGATGTCACTGAG

Product: cytochrome c

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MSINRRQALTKIIGLSTAAAGAALVGTSAFAATDADGNYRLEMGEKLKYVPLDAMATAKLAYETGGGCMHQVFHSIVTML
AQSSSVDADKFATIPTALAGYGWAGIVGQGTICGNLNAAGMLINILDDINGQNSAVIGASFRYYETQDLPLSSDEFVAGI
GSTAEKSLEVGATSIANSPLCHSSISNWSAASGKVFKEKGERCKRLSASLAYHIVELLNRAHGGEDISLLPEAKPSAETQ
ACQSCHGVESTMSTAASVKADMECTTCHTGHFN

Sequences:

>Translated_273_residues
MSINRRQALTKIIGLSTAAAGAALVGTSAFAATDADGNYRLEMGEKLKYVPLDAMATAKLAYETGGGCMHQVFHSIVTML
AQSSSVDADKFATIPTALAGYGWAGIVGQGTICGNLNAAGMLINILDDINGQNSAVIGASFRYYETQDLPLSSDEFVAGI
GSTAEKSLEVGATSIANSPLCHSSISNWSAASGKVFKEKGERCKRLSASLAYHIVELLNRAHGGEDISLLPEAKPSAETQ
ACQSCHGVESTMSTAASVKADMECTTCHTGHFN
>Mature_272_residues
SINRRQALTKIIGLSTAAAGAALVGTSAFAATDADGNYRLEMGEKLKYVPLDAMATAKLAYETGGGCMHQVFHSIVTMLA
QSSSVDADKFATIPTALAGYGWAGIVGQGTICGNLNAAGMLINILDDINGQNSAVIGASFRYYETQDLPLSSDEFVAGIG
STAEKSLEVGATSIANSPLCHSSISNWSAASGKVFKEKGERCKRLSASLAYHIVELLNRAHGGEDISLLPEAKPSAETQA
CQSCHGVESTMSTAASVKADMECTTCHTGHFN

Specific function: Diheme cytochrome c which may be involved in sulfate reduction [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010181
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09719 C_GCAxxG_C_C [H]

EC number: NA

Molecular weight: Translated: 28435; Mature: 28304

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINRRQALTKIIGLSTAAAGAALVGTSAFAATDADGNYRLEMGEKLKYVPLDAMATAKL
CCCHHHHHHHHHHHHHHHHCCHHHHCCCHHEEECCCCCEEEECCCCEEECCCCHHHHHHH
AYETGGGCMHQVFHSIVTMLAQSSSVDADKFATIPTALAGYGWAGIVGQGTICGNLNAAG
EEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHH
MLINILDDINGQNSAVIGASFRYYETQDLPLSSDEFVAGIGSTAEKSLEVGATSIANSPL
HHHHHHHCCCCCCCEEEECEEEEEECCCCCCCCCHHHCCCCCHHHHHHHHCHHHHCCCCC
CHSSISNWSAASGKVFKEKGERCKRLSASLAYHIVELLNRAHGGEDISLLPEAKPSAETQ
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHH
ACQSCHGVESTMSTAASVKADMECTTCHTGHFN
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
>Mature Secondary Structure 
SINRRQALTKIIGLSTAAAGAALVGTSAFAATDADGNYRLEMGEKLKYVPLDAMATAKL
CCHHHHHHHHHHHHHHHHCCHHHHCCCHHEEECCCCCEEEECCCCEEECCCCHHHHHHH
AYETGGGCMHQVFHSIVTMLAQSSSVDADKFATIPTALAGYGWAGIVGQGTICGNLNAAG
EEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHH
MLINILDDINGQNSAVIGASFRYYETQDLPLSSDEFVAGIGSTAEKSLEVGATSIANSPL
HHHHHHHCCCCCCCEEEECEEEEEECCCCCCCCCHHHCCCCCHHHHHHHHCHHHHCCCCC
CHSSISNWSAASGKVFKEKGERCKRLSASLAYHIVELLNRAHGGEDISLLPEAKPSAETQ
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHH
ACQSCHGVESTMSTAASVKADMECTTCHTGHFN
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9346301; 1646022 [H]