Click here to switch to the map view.

The map label for this gene is 167625423

Identifier: 167625423

GI number: 167625423

Start: 4288097

End: 4288696

Strand: Reverse

Name: 167625423

Synonym: Shal_3515

Alternate gene names: NA

Gene position: 4288696-4288097 (Counterclockwise)

Preceding gene: 167625425

Following gene: 167625422

Centisome position: 82.05

GC content: 41.17

Gene sequence:

>600_bases
ATGGCGCTATGTCTAAATTTGTTCTCATTACCGAATGGACACATTCAATTTTTAAAACACAATCCGCAAACCATCCAAGC
TTACCTAATGGGGCAAGCGCCAGAATTGGAAGCTGAAGTTGCAATTAAGCAGCAATCTTTATTGAGTAAGCTTGTTAGGG
GGATTAGTGGCCGAAAAGCATTAGAGCTGCCGCGGGATTGGCCACAGGATGAGATTAAAATGATAGGGCCTAATGTTAAC
CATAGAAACGTCGATCTGTACCATTATATTCTCAACGATACTGAGGAACGAGTAAAAGGTGCTGGGAGTTTATTTCAGAC
TTGGCTAGATATTCATAATCACGACGCCATCAAAATGGATCGCTGTAATGAATCCTTTGCGTTTGAAAGTTATGCCTTAG
CTGAGTTATTTACCTTGTTATCTAAGTTAGATGAGCCAGTTGTTAGGGGCAGGTTTGATGCTTGGCTACTTGAATATAAC
CCCGATTACATTCCCAAGGAGTCTGAATACCTTGAGATGATCCAGGGTTGGGAGCACTTTAGAGTAAAAGTCCATGAGGC
TATGGAAGTAAATCATGGTTTAATGTGGGTTACACTTTGA

Upstream 100 bases:

>100_bases
GGAGGCTAGCGAGGCTATTGATTGTGATTATGAGTCTTGTTTACTCTTAGTCATCATCTTGAAATATACCCTTTATGTAT
AAATGGATTACGGAGCCCAC

Downstream 100 bases:

>100_bases
GCCTGCGCGAACGGGATAAGCATGAGATATAGAGTAAATCGATGAGTCTATTTAAGTTTGGTTTAGCGGCAGATAAATCC
GCGACGATTCGCAGAGAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MALCLNLFSLPNGHIQFLKHNPQTIQAYLMGQAPELEAEVAIKQQSLLSKLVRGISGRKALELPRDWPQDEIKMIGPNVN
HRNVDLYHYILNDTEERVKGAGSLFQTWLDIHNHDAIKMDRCNESFAFESYALAELFTLLSKLDEPVVRGRFDAWLLEYN
PDYIPKESEYLEMIQGWEHFRVKVHEAMEVNHGLMWVTL

Sequences:

>Translated_199_residues
MALCLNLFSLPNGHIQFLKHNPQTIQAYLMGQAPELEAEVAIKQQSLLSKLVRGISGRKALELPRDWPQDEIKMIGPNVN
HRNVDLYHYILNDTEERVKGAGSLFQTWLDIHNHDAIKMDRCNESFAFESYALAELFTLLSKLDEPVVRGRFDAWLLEYN
PDYIPKESEYLEMIQGWEHFRVKVHEAMEVNHGLMWVTL
>Mature_198_residues
ALCLNLFSLPNGHIQFLKHNPQTIQAYLMGQAPELEAEVAIKQQSLLSKLVRGISGRKALELPRDWPQDEIKMIGPNVNH
RNVDLYHYILNDTEERVKGAGSLFQTWLDIHNHDAIKMDRCNESFAFESYALAELFTLLSKLDEPVVRGRFDAWLLEYNP
DYIPKESEYLEMIQGWEHFRVKVHEAMEVNHGLMWVTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23134; Mature: 23003

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALCLNLFSLPNGHIQFLKHNPQTIQAYLMGQAPELEAEVAIKQQSLLSKLVRGISGRKA
CCEEEEEHHCCCCCEEEEECCCHHEEHEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCE
LELPRDWPQDEIKMIGPNVNHRNVDLYHYILNDTEERVKGAGSLFQTWLDIHNHDAIKMD
ECCCCCCCCCHHEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEC
RCNESFAFESYALAELFTLLSKLDEPVVRGRFDAWLLEYNPDYIPKESEYLEMIQGWEHF
CCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCHHHH
RVKVHEAMEVNHGLMWVTL
HHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure 
ALCLNLFSLPNGHIQFLKHNPQTIQAYLMGQAPELEAEVAIKQQSLLSKLVRGISGRKA
CEEEEEHHCCCCCEEEEECCCHHEEHEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCE
LELPRDWPQDEIKMIGPNVNHRNVDLYHYILNDTEERVKGAGSLFQTWLDIHNHDAIKMD
ECCCCCCCCCHHEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEC
RCNESFAFESYALAELFTLLSKLDEPVVRGRFDAWLLEYNPDYIPKESEYLEMIQGWEHF
CCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCHHHH
RVKVHEAMEVNHGLMWVTL
HHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA