Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is btuR [H]

Identifier: 167625364

GI number: 167625364

Start: 4207401

End: 4208018

Strand: Reverse

Name: btuR [H]

Synonym: Shal_3453

Alternate gene names: 167625364

Gene position: 4208018-4207401 (Counterclockwise)

Preceding gene: 167625365

Following gene: 167625363

Centisome position: 80.51

GC content: 52.75

Gene sequence:

>618_bases
ATGACGGATAATAAGTCGGCCGAGGCAGCGAAAGCGGAGCGCCATAAAGCGCGTCAGCAGCGGATTAAAGAGGGTGTGGA
TGCCAAGATCGATCGCGCGCAGGAAGAGAAAGGGATCTTATTAGTCCTGACCGGTAACGGTAAAGGCAAGTCAACATCAG
GTTTTGGCACTGTCGTTCGCGCAGTCGGTCATGGCAAGAAAGCCGCCGTGGTGCAGTTTATTAAAGGCAACTGGGACTGT
GGTGAGCGCACCTTGCTAGAAGGCGCTGGCGTCGAGTTTCATGTGATGGCAACAGGCTTTACCTGGGAAACCCAAGACCG
TGAAAAAGATACCGTCGCAGCGCTGCAAGCTTGGGAGGCTGCGGAGAAGTTACTTAAAGATGACAGTATCGATCTGGTGA
TGCTCGATGAGCTAACGTATATGATTAGCTATCACTATCTAGAGGTAGAGCGAGTGCTTGAGGCGCTTGATAATCGCCCG
CCAATGCAGCATGTGATAGTGACGGGCAGGGCGTGTCATCGAGCTATTATCGAGCTGGCCGATACGGTGAGCGAGGTGCT
CCCGATCAAACACGCATTTGATAACGGTATCAAAGCCCAGCCCGGCTTCGACTACTAA

Upstream 100 bases:

>100_bases
TTTGTTGGTGTAAGTGTTTTTTTTAGATGGTAATAGCTGAGCGTTTTTAAATAACTTAGCAAATTAGATTCGTGTTTAAG
GGATAAAATAGGGATGTAAT

Downstream 100 bases:

>100_bases
ATTTCGTCCTGTTTGAAATGATGACTGCATTGTCTTCGTTTTCCTACCCCATCACATACTACTCGTATGTGATGGGGCTA
GGAAAACTCGACGGCTTTGT

Product: cob(I)yrinic acid a,c-diamide adenosyltransferase

Products: NA

Alternate protein names: Cob(I)alamin adenosyltransferase; Corrinoid adenosyltransferase [H]

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MTDNKSAEAAKAERHKARQQRIKEGVDAKIDRAQEEKGILLVLTGNGKGKSTSGFGTVVRAVGHGKKAAVVQFIKGNWDC
GERTLLEGAGVEFHVMATGFTWETQDREKDTVAALQAWEAAEKLLKDDSIDLVMLDELTYMISYHYLEVERVLEALDNRP
PMQHVIVTGRACHRAIIELADTVSEVLPIKHAFDNGIKAQPGFDY

Sequences:

>Translated_205_residues
MTDNKSAEAAKAERHKARQQRIKEGVDAKIDRAQEEKGILLVLTGNGKGKSTSGFGTVVRAVGHGKKAAVVQFIKGNWDC
GERTLLEGAGVEFHVMATGFTWETQDREKDTVAALQAWEAAEKLLKDDSIDLVMLDELTYMISYHYLEVERVLEALDNRP
PMQHVIVTGRACHRAIIELADTVSEVLPIKHAFDNGIKAQPGFDY
>Mature_204_residues
TDNKSAEAAKAERHKARQQRIKEGVDAKIDRAQEEKGILLVLTGNGKGKSTSGFGTVVRAVGHGKKAAVVQFIKGNWDCG
ERTLLEGAGVEFHVMATGFTWETQDREKDTVAALQAWEAAEKLLKDDSIDLVMLDELTYMISYHYLEVERVLEALDNRPP
MQHVIVTGRACHRAIIELADTVSEVLPIKHAFDNGIKAQPGFDY

Specific function: Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids [H]

COG id: COG2109

COG function: function code H; ATP:corrinoid adenosyltransferase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1787525, Length=193, Percent_Identity=63.7305699481865, Blast_Score=272, Evalue=1e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003724 [H]

Pfam domain/function: PF02572 CobA_CobO_BtuR [H]

EC number: =2.5.1.17 [H]

Molecular weight: Translated: 22704; Mature: 22573

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDNKSAEAAKAERHKARQQRIKEGVDAKIDRAQEEKGILLVLTGNGKGKSTSGFGTVVR
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHH
AVGHGKKAAVVQFIKGNWDCGERTLLEGAGVEFHVMATGFTWETQDREKDTVAALQAWEA
HHCCCCHHHHHHHHCCCCCCCCHHHHCCCCCEEEEEEECEEECCCCCCHHHHHHHHHHHH
AEKLLKDDSIDLVMLDELTYMISYHYLEVERVLEALDNRPPMQHVIVTGRACHRAIIELA
HHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECHHHHHHHHHHH
DTVSEVLPIKHAFDNGIKAQPGFDY
HHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TDNKSAEAAKAERHKARQQRIKEGVDAKIDRAQEEKGILLVLTGNGKGKSTSGFGTVVR
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHH
AVGHGKKAAVVQFIKGNWDCGERTLLEGAGVEFHVMATGFTWETQDREKDTVAALQAWEA
HHCCCCHHHHHHHHCCCCCCCCHHHHCCCCCEEEEEEECEEECCCCCCHHHHHHHHHHHH
AEKLLKDDSIDLVMLDELTYMISYHYLEVERVLEALDNRPPMQHVIVTGRACHRAIIELA
HHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECHHHHHHHHHHH
DTVSEVLPIKHAFDNGIKAQPGFDY
HHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]