Click here to switch to the map view.

The map label for this gene is 167625309

Identifier: 167625309

GI number: 167625309

Start: 4144211

End: 4144735

Strand: Reverse

Name: 167625309

Synonym: Shal_3398

Alternate gene names: NA

Gene position: 4144735-4144211 (Counterclockwise)

Preceding gene: 167625310

Following gene: 167625308

Centisome position: 79.3

GC content: 44.57

Gene sequence:

>525_bases
ATGTCAGTCCCTATATCAGTGTCAGTTGTACAAATTGCTCAGCATCTAGAAAACAATCCAGCATCTATGCCTAGTCAAAT
TGCCGCAGAGCTTAATATTAGCGAGTTTGAGGTAATATCCGCACTTCCTGTTGAGCAGTTGGCTATTTTACCGTTAGCAG
ATAAAGACGCATTGTTAGCTGAGCTACCAGAGTGGGGCAGTATGACCACGATAGTATCGGCATCCGGCAGTATTTTTGAA
TTTAAAGGTAGCTTCCCTAAAGGCAAGTATGCTCATGGTTACTACAACCTGATCACCAAAGGTGACGGTTTGCATGGCCA
CCTTAAGTTAGATGAGATCACCGCTATTGCACTGATAAGCAAACCCTTCAGAGGCACTGAAAGTCACTCCATTAACTTCT
TTGGTGCACAAGGTGAGGTGGTATTTAAAGTCTATTTAGGACGCGATAAGAAGCGCGTGTTATTGCCAGAACAGGTGGCC
CGTTTCAATGAGCTGAAGCAGCAAGTGTTGAGCGCCATCGCTTAA

Upstream 100 bases:

>100_bases
TTACTGCATAAAAGTGGCTAGGCCTCTTTGCTGTTTAGCTAGCAGTCGTTTAGTTAATAGTTGTTTAGTTAATTACCATT
TAGTTAATTGGAGATCTTCC

Downstream 100 bases:

>100_bases
GCCTAATAAAAAGATTTAAGCGTAGGTAAAGGGCTCTGAATCTAAGTAAAGAGCCCTCAGTCTAAATAAAAAGCCCTTAG
CTAAGTAAAGAGCCCTTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: HuvX Protein; Heme Iron Utilization Protein; Coproporphyrinogen III Oxidase; HutX Protein; Oxygen Independent Coproporphyrinogen III Oxidase; Heme Utilization Protein HugX; Coproporphyrinogen Dehydrogenase; Oxygen-Independent Coproporphyrinogen III Oxidase; HugX Protein; Heme Uptake And Utilization Protein HuvX

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MSVPISVSVVQIAQHLENNPASMPSQIAAELNISEFEVISALPVEQLAILPLADKDALLAELPEWGSMTTIVSASGSIFE
FKGSFPKGKYAHGYYNLITKGDGLHGHLKLDEITAIALISKPFRGTESHSINFFGAQGEVVFKVYLGRDKKRVLLPEQVA
RFNELKQQVLSAIA

Sequences:

>Translated_174_residues
MSVPISVSVVQIAQHLENNPASMPSQIAAELNISEFEVISALPVEQLAILPLADKDALLAELPEWGSMTTIVSASGSIFE
FKGSFPKGKYAHGYYNLITKGDGLHGHLKLDEITAIALISKPFRGTESHSINFFGAQGEVVFKVYLGRDKKRVLLPEQVA
RFNELKQQVLSAIA
>Mature_173_residues
SVPISVSVVQIAQHLENNPASMPSQIAAELNISEFEVISALPVEQLAILPLADKDALLAELPEWGSMTTIVSASGSIFEF
KGSFPKGKYAHGYYNLITKGDGLHGHLKLDEITAIALISKPFRGTESHSINFFGAQGEVVFKVYLGRDKKRVLLPEQVAR
FNELKQQVLSAIA

Specific function: Unknown

COG id: COG3721

COG function: function code P; Putative heme iron utilization protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18948; Mature: 18817

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVPISVSVVQIAQHLENNPASMPSQIAAELNISEFEVISALPVEQLAILPLADKDALLA
CCCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHCCCHHHEEEEECCCCCHHHH
ELPEWGSMTTIVSASGSIFEFKGSFPKGKYAHGYYNLITKGDGLHGHLKLDEITAIALIS
HCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEHHHHEEEEEEC
KPFRGTESHSINFFGAQGEVVFKVYLGRDKKRVLLPEQVARFNELKQQVLSAIA
CCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVPISVSVVQIAQHLENNPASMPSQIAAELNISEFEVISALPVEQLAILPLADKDALLA
CCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHCCCHHHEEEEECCCCCHHHH
ELPEWGSMTTIVSASGSIFEFKGSFPKGKYAHGYYNLITKGDGLHGHLKLDEITAIALIS
HCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEHHHHEEEEEEC
KPFRGTESHSINFFGAQGEVVFKVYLGRDKKRVLLPEQVARFNELKQQVLSAIA
CCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA