Click here to switch to the map view.

The map label for this gene is 167625225

Identifier: 167625225

GI number: 167625225

Start: 4042015

End: 4042263

Strand: Reverse

Name: 167625225

Synonym: Shal_3313

Alternate gene names: NA

Gene position: 4042263-4042015 (Counterclockwise)

Preceding gene: 167625227

Following gene: 167625224

Centisome position: 77.34

GC content: 46.99

Gene sequence:

>249_bases
ATGAGTGATGAGCAAAACGTAATTGATAATCTAGACGACCTAAGGCGCTTTCTGGTGTCGGTTGAAACTGGTGGTTTGGG
TCTAGAGGGAGTTGCTGGTATCGGTATGGCAACCAATAATGCCGATGGTCGTCATTTTGTTGCGGTTTTCGATAATAATC
ATAAGCTGCTACATGCGCGTTGGGTCACAGATGAAGTGTATGAGACGGGCAAAGAGATGGTGCGTGATGGCGTTCGAGGT
CAGCACTAA

Upstream 100 bases:

>100_bases
GCACTCTTTTAATCCTTAGCTATGATCTGTAAAGTACGCCACATAATATACTTAGGGCCTATAGGCGCTTTGGTTGTGTG
AACAGATAAGAGTATTAAAG

Downstream 100 bases:

>100_bases
GACGACGGTAGGAAGAGCGACTAAGAGTCAACAATTATCGCGACTCAAGTTGCACGAAAAATCATACTAAGCCCAAGGTT
AATCGCCTAGGGCTTTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MSDEQNVIDNLDDLRRFLVSVETGGLGLEGVAGIGMATNNADGRHFVAVFDNNHKLLHARWVTDEVYETGKEMVRDGVRG
QH

Sequences:

>Translated_82_residues
MSDEQNVIDNLDDLRRFLVSVETGGLGLEGVAGIGMATNNADGRHFVAVFDNNHKLLHARWVTDEVYETGKEMVRDGVRG
QH
>Mature_81_residues
SDEQNVIDNLDDLRRFLVSVETGGLGLEGVAGIGMATNNADGRHFVAVFDNNHKLLHARWVTDEVYETGKEMVRDGVRGQ
H

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9095; Mature: 8964

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDEQNVIDNLDDLRRFLVSVETGGLGLEGVAGIGMATNNADGRHFVAVFDNNHKLLHAR
CCCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCEEEEEE
WVTDEVYETGKEMVRDGVRGQH
CCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SDEQNVIDNLDDLRRFLVSVETGGLGLEGVAGIGMATNNADGRHFVAVFDNNHKLLHAR
CCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCEEEEEE
WVTDEVYETGKEMVRDGVRGQH
CCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA