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The map label for this gene is yliI [C]

Identifier: 167625207

GI number: 167625207

Start: 4016568

End: 4017644

Strand: Reverse

Name: yliI [C]

Synonym: Shal_3295

Alternate gene names: 167625207

Gene position: 4017644-4016568 (Counterclockwise)

Preceding gene: 167625208

Following gene: 167625205

Centisome position: 76.86

GC content: 46.7

Gene sequence:

>1077_bases
ATGAAATCAGCACTTATCAAAACAGGATTGTTACTACTCGCCGCAGTATCGAGTTGCTCCCAAGCCTATGAAGCAGAAAA
AATTGCCAGTGGGTTAAATATTCCTTGGGGCTTAGCCTATGTTGACCCGCAAACCATGCTGGTGACAGAGAGACAAGGCG
TGGTAAAGCGTGTAAACCTTGAAACGGGTAGGCATCAAACACTGTTTACGCCAGAAGGTGTGTGGGCTGAGGGCCAGGGC
GGTTTGCTGGATATTGCATTATCTCCTTTTGAAGCTAACAAAGTTTACCTGACTTACAGTAAAGATATTGAAGGTGAGGG
CGCCACGACACTTGCTCAAGCGACTTACAAAAACGGTAAGCTTACCGATTGGCAAGATCTGTTTGTATCGACTTCGCGCA
CAGATACCAGTAGGCACTTTGGTAGTCGGATTACTTTCGATAAAAACAGTCTGTACTTTTCAATTGGCGATCGCGGCGTG
CGTGACAATGGCCAAGATACCTTAACCCATGCTGGAGCCATTTTACGTTTGAACCCCGATGGCAGTGTGCCAAGCGATAA
TCCATTTGTTGATAATAAGGCTGTGCTCGATGAGATTTGGAGTTACGGCCACCGTAATCCTCAAGGGTTAGTTTATGATG
CCAGCAGCCAAAAACTGTGGTCGATTGAGCATGGTCCTCGCGGCGGTGACGAAATTAACTTAATCAAACGCGGTGCCAAT
TATGGCTGGCCAATCACCTCCCACGGTAAAGAATACTGGGGGCCGATTAGCGTCGGAGACGGCAAGTTAAAAGAGGGCGT
TGAGCCGCCGGTTAAGGTGTATGTCCCGTCAATCGCACCAGGCAGTTTAGTGCTGTATCGTGGTGAAATATTTCCTGAGC
TCAATGGCAAACTATTAGCGGGTGCACTTAAGTTGACTCACATTAATGTCGTGACGATTAACGAGGTGGGAGAAGCGATT
GCTGAACAACGAATAATGTCAGAACTTGGTGAACGTATTCGCGATATTGAAGCAACGCCGAAAGGCGATATCTATTTCAG
TACCGATAGCGGTAATCTTTATAAGCTTAAAAGATAG

Upstream 100 bases:

>100_bases
GTCACGCTTTTGATTTTCCTCGCAGGGCACAGCCCGCCCTCGAAGCGCAGCGTCCTAGCACCTAATCATAAAAGTAATTA
AAAAGGGGACTGGCATGTGG

Downstream 100 bases:

>100_bases
GTTCTAGGAAAAGCTAAGAAAGGTTCTAGATCCTAGGAAAAGAAGGAAAAGCAGGTTCTAGGTTCTAGGATCTAGAACCT
CGCAGCGAAGCGTCCTAGGA

Product: glucose sorbosone dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MKSALIKTGLLLLAAVSSCSQAYEAEKIASGLNIPWGLAYVDPQTMLVTERQGVVKRVNLETGRHQTLFTPEGVWAEGQG
GLLDIALSPFEANKVYLTYSKDIEGEGATTLAQATYKNGKLTDWQDLFVSTSRTDTSRHFGSRITFDKNSLYFSIGDRGV
RDNGQDTLTHAGAILRLNPDGSVPSDNPFVDNKAVLDEIWSYGHRNPQGLVYDASSQKLWSIEHGPRGGDEINLIKRGAN
YGWPITSHGKEYWGPISVGDGKLKEGVEPPVKVYVPSIAPGSLVLYRGEIFPELNGKLLAGALKLTHINVVTINEVGEAI
AEQRIMSELGERIRDIEATPKGDIYFSTDSGNLYKLKR

Sequences:

>Translated_358_residues
MKSALIKTGLLLLAAVSSCSQAYEAEKIASGLNIPWGLAYVDPQTMLVTERQGVVKRVNLETGRHQTLFTPEGVWAEGQG
GLLDIALSPFEANKVYLTYSKDIEGEGATTLAQATYKNGKLTDWQDLFVSTSRTDTSRHFGSRITFDKNSLYFSIGDRGV
RDNGQDTLTHAGAILRLNPDGSVPSDNPFVDNKAVLDEIWSYGHRNPQGLVYDASSQKLWSIEHGPRGGDEINLIKRGAN
YGWPITSHGKEYWGPISVGDGKLKEGVEPPVKVYVPSIAPGSLVLYRGEIFPELNGKLLAGALKLTHINVVTINEVGEAI
AEQRIMSELGERIRDIEATPKGDIYFSTDSGNLYKLKR
>Mature_358_residues
MKSALIKTGLLLLAAVSSCSQAYEAEKIASGLNIPWGLAYVDPQTMLVTERQGVVKRVNLETGRHQTLFTPEGVWAEGQG
GLLDIALSPFEANKVYLTYSKDIEGEGATTLAQATYKNGKLTDWQDLFVSTSRTDTSRHFGSRITFDKNSLYFSIGDRGV
RDNGQDTLTHAGAILRLNPDGSVPSDNPFVDNKAVLDEIWSYGHRNPQGLVYDASSQKLWSIEHGPRGGDEINLIKRGAN
YGWPITSHGKEYWGPISVGDGKLKEGVEPPVKVYVPSIAPGSLVLYRGEIFPELNGKLLAGALKLTHINVVTINEVGEAI
AEQRIMSELGERIRDIEATPKGDIYFSTDSGNLYKLKR

Specific function: Unknown

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Escherichia coli, GI1787060, Length=358, Percent_Identity=36.3128491620112, Blast_Score=219, Evalue=2e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 39211; Mature: 39211

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSALIKTGLLLLAAVSSCSQAYEAEKIASGLNIPWGLAYVDPQTMLVTERQGVVKRVNL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCEEEEEC
ETGRHQTLFTPEGVWAEGQGGLLDIALSPFEANKVYLTYSKDIEGEGATTLAQATYKNGK
CCCCCEEEECCCCCEECCCCCEEEEEECCCCCCEEEEEEECCCCCCCCEEEEHHHCCCCC
LTDWQDLFVSTSRTDTSRHFGSRITFDKNSLYFSIGDRGVRDNGQDTLTHAGAILRLNPD
CCCHHHHEEECCCCCCHHHCCCEEEEECCEEEEEECCCCCCCCCCHHHHHCCEEEEECCC
GSVPSDNPFVDNKAVLDEIWSYGHRNPQGLVYDASSQKLWSIEHGPRGGDEINLIKRGAN
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCEEEEECCCCCCCCEEEEEEECCC
YGWPITSHGKEYWGPISVGDGKLKEGVEPPVKVYVPSIAPGSLVLYRGEIFPELNGKLLA
CCCCCCCCCHHHCCCEECCCCHHHCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCEEEE
GALKLTHINVVTINEVGEAIAEQRIMSELGERIRDIEATPKGDIYFSTDSGNLYKLKR
EEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEECC
>Mature Secondary Structure
MKSALIKTGLLLLAAVSSCSQAYEAEKIASGLNIPWGLAYVDPQTMLVTERQGVVKRVNL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCEEEEEC
ETGRHQTLFTPEGVWAEGQGGLLDIALSPFEANKVYLTYSKDIEGEGATTLAQATYKNGK
CCCCCEEEECCCCCEECCCCCEEEEEECCCCCCEEEEEEECCCCCCCCEEEEHHHCCCCC
LTDWQDLFVSTSRTDTSRHFGSRITFDKNSLYFSIGDRGVRDNGQDTLTHAGAILRLNPD
CCCHHHHEEECCCCCCHHHCCCEEEEECCEEEEEECCCCCCCCCCHHHHHCCEEEEECCC
GSVPSDNPFVDNKAVLDEIWSYGHRNPQGLVYDASSQKLWSIEHGPRGGDEINLIKRGAN
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCEEEEECCCCCCCCEEEEEEECCC
YGWPITSHGKEYWGPISVGDGKLKEGVEPPVKVYVPSIAPGSLVLYRGEIFPELNGKLLA
CCCCCCCCCHHHCCCEECCCCHHHCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCEEEE
GALKLTHINVVTINEVGEAIAEQRIMSELGERIRDIEATPKGDIYFSTDSGNLYKLKR
EEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]