Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167625181

Identifier: 167625181

GI number: 167625181

Start: 3985945

End: 3987003

Strand: Reverse

Name: 167625181

Synonym: Shal_3269

Alternate gene names: NA

Gene position: 3987003-3985945 (Counterclockwise)

Preceding gene: 167625182

Following gene: 167625180

Centisome position: 76.28

GC content: 35.69

Gene sequence:

>1059_bases
ATGAAAAACTTTGACTCTCGTACCTATAGCATTAATGACTTCTTAGAATGGGAAAGCAATATGCAACTTGAGCTTTCCCC
AAAGTTTCAACGACGCTCCGTTTGGACTGATACAGCCCGTTCGTTTTTAATGGATACAATTATAGAAGGAAAGCCAATCC
CGAAAGTTTTTGTTAGGCAAAAGCTTAACACTCAAACCAGAAAATCAATACGTGAAGTCGTTGATGGGCAACAAAGGCTA
CGTACGATTCTATCATTTATGAAAGACGGCTTTACGATTAACAAGAAGCACAATTCAAAATATGGCGGCCTATATTTTAG
CCAGCTTGATCAAGCTGATGAAGATATCCAAGCACACATTTTGAACTACGAAATATCTGTAGATTTACTTGTGAATATGT
CTGATTCAGATGTTCTAGATATATTCAGCAGACTGAATTCATATTCAGTTACCCTTAATGATCAAGAAAAAATAAATGCT
AACCACTTTAGTTCTTTCAAGGTTCTAGCTGATAAAGTCGCACATAAACACAATTCTTTTTGGACAAAGAACAAAATAAT
CGCTGAACTAAAAGTGCTTCGTATGGAGGATGTTCAAATGTCTGCGGACCTTCTTATTGCAATGATTGAAGGCATCATGA
CTAAGAAGAATATCAAAAAGCAGTATGCTTTATATGAGAAAGAGTTTGAGCATGATGTCGATGAGTTAGAAGCTAGGTTT
GATAGGGTTATTAACCTTATTGACTCTCTGTTCTCTGGAAATTTAAGCAAACGTGAGTTTAAGAGAAATCATGTGTTTTA
CTCGCTATTTCTAGCTATTTATCACCTAGAGTTTGGAGTAGTAAATATTGATCGCCCTACTAATTTCTCTTTGGATGATA
ATCTGTCTAAAGTTTCTCAACGCCTAGAGCATATCGATTATATTTTTGAAGAAATGGATAAAAATAACCTTTCAGAAAAT
GACCTGCAGTTCCTTAATGACTGCCGTCGAGCAACAACTGATACATCAGTCAGAGTGAGAAGAAGTACTTACTTAATTGA
CCTGATGATAACGGATTAA

Upstream 100 bases:

>100_bases
CCTGTTAAATCAGTTCATTAATAACGTCATAATATCAGATAGTTAATAGGTAATATGAGTGTATAATCAAAGAAACCTAG
TTTTCTTAAGGCAAAAAATA

Downstream 100 bases:

>100_bases
AGCAGAGATGAATGATAATTTTTCTGAGTTTAGGGCTGGAATAACCCAAGTTAACAATTATATAGCGATAGCTTACAAAA
CAGCAGAAGATGGTAGTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MKNFDSRTYSINDFLEWESNMQLELSPKFQRRSVWTDTARSFLMDTIIEGKPIPKVFVRQKLNTQTRKSIREVVDGQQRL
RTILSFMKDGFTINKKHNSKYGGLYFSQLDQADEDIQAHILNYEISVDLLVNMSDSDVLDIFSRLNSYSVTLNDQEKINA
NHFSSFKVLADKVAHKHNSFWTKNKIIAELKVLRMEDVQMSADLLIAMIEGIMTKKNIKKQYALYEKEFEHDVDELEARF
DRVINLIDSLFSGNLSKREFKRNHVFYSLFLAIYHLEFGVVNIDRPTNFSLDDNLSKVSQRLEHIDYIFEEMDKNNLSEN
DLQFLNDCRRATTDTSVRVRRSTYLIDLMITD

Sequences:

>Translated_352_residues
MKNFDSRTYSINDFLEWESNMQLELSPKFQRRSVWTDTARSFLMDTIIEGKPIPKVFVRQKLNTQTRKSIREVVDGQQRL
RTILSFMKDGFTINKKHNSKYGGLYFSQLDQADEDIQAHILNYEISVDLLVNMSDSDVLDIFSRLNSYSVTLNDQEKINA
NHFSSFKVLADKVAHKHNSFWTKNKIIAELKVLRMEDVQMSADLLIAMIEGIMTKKNIKKQYALYEKEFEHDVDELEARF
DRVINLIDSLFSGNLSKREFKRNHVFYSLFLAIYHLEFGVVNIDRPTNFSLDDNLSKVSQRLEHIDYIFEEMDKNNLSEN
DLQFLNDCRRATTDTSVRVRRSTYLIDLMITD
>Mature_352_residues
MKNFDSRTYSINDFLEWESNMQLELSPKFQRRSVWTDTARSFLMDTIIEGKPIPKVFVRQKLNTQTRKSIREVVDGQQRL
RTILSFMKDGFTINKKHNSKYGGLYFSQLDQADEDIQAHILNYEISVDLLVNMSDSDVLDIFSRLNSYSVTLNDQEKINA
NHFSSFKVLADKVAHKHNSFWTKNKIIAELKVLRMEDVQMSADLLIAMIEGIMTKKNIKKQYALYEKEFEHDVDELEARF
DRVINLIDSLFSGNLSKREFKRNHVFYSLFLAIYHLEFGVVNIDRPTNFSLDDNLSKVSQRLEHIDYIFEEMDKNNLSEN
DLQFLNDCRRATTDTSVRVRRSTYLIDLMITD

Specific function: Unknown

COG id: COG1479

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41412; Mature: 41412

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNFDSRTYSINDFLEWESNMQLELSPKFQRRSVWTDTARSFLMDTIIEGKPIPKVFVRQ
CCCCCCCEEEHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
KLNTQTRKSIREVVDGQQRLRTILSFMKDGFTINKKHNSKYGGLYFSQLDQADEDIQAHI
HCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHCCCHHHHHHHH
LNYEISVDLLVNMSDSDVLDIFSRLNSYSVTLNDQEKINANHFSSFKVLADKVAHKHNSF
EEEEEEEEEEEECCCCHHHHHHHHCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHHHCCH
WTKNKIIAELKVLRMEDVQMSADLLIAMIEGIMTKKNIKKQYALYEKEFEHDVDELEARF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
DRVINLIDSLFSGNLSKREFKRNHVFYSLFLAIYHLEFGVVNIDRPTNFSLDDNLSKVSQ
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCHHHHHH
RLEHIDYIFEEMDKNNLSENDLQFLNDCRRATTDTSVRVRRSTYLIDLMITD
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEC
>Mature Secondary Structure
MKNFDSRTYSINDFLEWESNMQLELSPKFQRRSVWTDTARSFLMDTIIEGKPIPKVFVRQ
CCCCCCCEEEHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
KLNTQTRKSIREVVDGQQRLRTILSFMKDGFTINKKHNSKYGGLYFSQLDQADEDIQAHI
HCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHCCCHHHHHHHH
LNYEISVDLLVNMSDSDVLDIFSRLNSYSVTLNDQEKINANHFSSFKVLADKVAHKHNSF
EEEEEEEEEEEECCCCHHHHHHHHCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHHHCCH
WTKNKIIAELKVLRMEDVQMSADLLIAMIEGIMTKKNIKKQYALYEKEFEHDVDELEARF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
DRVINLIDSLFSGNLSKREFKRNHVFYSLFLAIYHLEFGVVNIDRPTNFSLDDNLSKVSQ
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCHHHHHH
RLEHIDYIFEEMDKNNLSENDLQFLNDCRRATTDTSVRVRRSTYLIDLMITD
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA