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The map label for this gene is yfgC [C]

Identifier: 167625077

GI number: 167625077

Start: 3864475

End: 3865275

Strand: Reverse

Name: yfgC [C]

Synonym: Shal_3165

Alternate gene names: 167625077

Gene position: 3865275-3864475 (Counterclockwise)

Preceding gene: 167625078

Following gene: 167625076

Centisome position: 73.95

GC content: 50.81

Gene sequence:

>801_bases
ATGAAAGGAATACTAATACTGCTTGGCGCAACATTGCTGCTAACCGGTTGTGCAACGAACCAATCGCCTACAGGGCGCGG
GCAAACGTTACTGTTCTCATCGCAAGAGATGTCGCAGCTTGGCGACTCCTCATTTGCCCAAATTAAGCGGCAAGAGAAAA
TTGGTCAGGATAAAGCGGTAAACGCGTACGTTAACTGTGTTGCCAATAGGATAACTCAGGCTCTGCCCAACCAAAGTTTG
CCTTGGGAAGTGGTGGTATTTGAGTCTGATCAAGTTAACGCCTTTGCTTTGCCAGGTGGTCATATCGGTGTGTATACCGG
ATTGCTTAATGTGGCAGTAAATGCCGACCAACTCGCCACTGTAGTTAGTCATGAGGTGGCCCATGTACTGGCAAACCACA
GTAACGAGCAAGTGTCGCGGGCACAGATGACAGGCGCAGGCATGAAACTGGCGGATCTGGCCTTAGGTGTAGGCGGCATT
GCCGATAAAGAGCTTTATATGGCGGCCCTCGGTTTAGGTGTGCAAGTCGGCTACATACTGCCTTATGGCCGCGACCAAGA
GTCTGAAGCCGATGTGATGGGGGTCGAGCTGATGGCGAAAGCAGGCTTTGATCCGGCCGCGAGTGTCGAGCTTTGGAAAA
ACATGTCAAAAGCGGGTGGCGAACAAGGGCCTGAATTGCTTTCAACCCATCCATCCCATGGACAGCGCATTGCTCAGCTG
CAACAGATGCAGGCAAAAGCCCAACCTTTATATCAAGCCAGCAAAGGCAGTGTGAAAAATAGTTGCCAAAGACCAAAATA
G

Upstream 100 bases:

>100_bases
TTCATCCTGTATATAATTTAAGCCTCGCGACTGCGGGGCTTTTTATTGTCTGACGTTTATTATTAACATTAGGCTATGCG
TAATAGGGAATTTAGCCGAT

Downstream 100 bases:

>100_bases
CTACGGTTTTTAGGGCAACATCACAGAAATTATGATAAAGTTGCGCGCGAAAATTCATTTGAATCATTGAGAGTACAATC
ATTATGTCTGAGAAGTTCAG

Product: peptidase M48 Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MKGILILLGATLLLTGCATNQSPTGRGQTLLFSSQEMSQLGDSSFAQIKRQEKIGQDKAVNAYVNCVANRITQALPNQSL
PWEVVVFESDQVNAFALPGGHIGVYTGLLNVAVNADQLATVVSHEVAHVLANHSNEQVSRAQMTGAGMKLADLALGVGGI
ADKELYMAALGLGVQVGYILPYGRDQESEADVMGVELMAKAGFDPAASVELWKNMSKAGGEQGPELLSTHPSHGQRIAQL
QQMQAKAQPLYQASKGSVKNSCQRPK

Sequences:

>Translated_266_residues
MKGILILLGATLLLTGCATNQSPTGRGQTLLFSSQEMSQLGDSSFAQIKRQEKIGQDKAVNAYVNCVANRITQALPNQSL
PWEVVVFESDQVNAFALPGGHIGVYTGLLNVAVNADQLATVVSHEVAHVLANHSNEQVSRAQMTGAGMKLADLALGVGGI
ADKELYMAALGLGVQVGYILPYGRDQESEADVMGVELMAKAGFDPAASVELWKNMSKAGGEQGPELLSTHPSHGQRIAQL
QQMQAKAQPLYQASKGSVKNSCQRPK
>Mature_266_residues
MKGILILLGATLLLTGCATNQSPTGRGQTLLFSSQEMSQLGDSSFAQIKRQEKIGQDKAVNAYVNCVANRITQALPNQSL
PWEVVVFESDQVNAFALPGGHIGVYTGLLNVAVNADQLATVVSHEVAHVLANHSNEQVSRAQMTGAGMKLADLALGVGGI
ADKELYMAALGLGVQVGYILPYGRDQESEADVMGVELMAKAGFDPAASVELWKNMSKAGGEQGPELLSTHPSHGQRIAQL
QQMQAKAQPLYQASKGSVKNSCQRPK

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=243, Percent_Identity=30.0411522633745, Blast_Score=99, Evalue=4e-21,
Organism=Escherichia coli, GI1788840, Length=238, Percent_Identity=30.2521008403361, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI87081800, Length=175, Percent_Identity=26.2857142857143, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI87082185, Length=247, Percent_Identity=29.1497975708502, Blast_Score=61, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6322940, Length=279, Percent_Identity=26.5232974910394, Blast_Score=102, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 28199; Mature: 28199

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGILILLGATLLLTGCATNQSPTGRGQTLLFSSQEMSQLGDSSFAQIKRQEKIGQDKAV
CCCEEEHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHCCHHHHHHHHHHHCCCCHHH
NAYVNCVANRITQALPNQSLPWEVVVFESDQVNAFALPGGHIGVYTGLLNVAVNADQLAT
HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCHHHHHHHHHHHCCHHHHHH
VVSHEVAHVLANHSNEQVSRAQMTGAGMKLADLALGVGGIADKELYMAALGLGVQVGYIL
HHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHCCEEEEEEE
PYGRDQESEADVMGVELMAKAGFDPAASVELWKNMSKAGGEQGPELLSTHPSHGQRIAQL
CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHH
QQMQAKAQPLYQASKGSVKNSCQRPK
HHHHHHHHHHHHCCCCCHHHHCCCCC
>Mature Secondary Structure
MKGILILLGATLLLTGCATNQSPTGRGQTLLFSSQEMSQLGDSSFAQIKRQEKIGQDKAV
CCCEEEHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHCCHHHHHHHHHHHCCCCHHH
NAYVNCVANRITQALPNQSLPWEVVVFESDQVNAFALPGGHIGVYTGLLNVAVNADQLAT
HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCHHHHHHHHHHHCCHHHHHH
VVSHEVAHVLANHSNEQVSRAQMTGAGMKLADLALGVGGIADKELYMAALGLGVQVGYIL
HHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHCCEEEEEEE
PYGRDQESEADVMGVELMAKAGFDPAASVELWKNMSKAGGEQGPELLSTHPSHGQRIAQL
CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHH
QQMQAKAQPLYQASKGSVKNSCQRPK
HHHHHHHHHHHHCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]