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The map label for this gene is nlpI [H]

Identifier: 167625053

GI number: 167625053

Start: 3834066

End: 3834959

Strand: Reverse

Name: nlpI [H]

Synonym: Shal_3141

Alternate gene names: 167625053

Gene position: 3834959-3834066 (Counterclockwise)

Preceding gene: 167625054

Following gene: 167625052

Centisome position: 73.37

GC content: 42.39

Gene sequence:

>894_bases
ATGAATCAAAAGATACGAACAGCTGTAGTCGTGGCTATGGTAAGTGTGAGTATGCTGCTGACAGGATGTGTGTCCACTCA
GTCAGGTAGTGAACAACAAGCATCGATTAGGGTTGCGCCTGTTTCGCCTGATTATAAATTAGAAATTACCTTAGCTAAGC
TAAATGAGATATTAGCCAGCGTTGAGTTAACGCCTGAGCAAAGGGCTCGTTTTCATTATGACCGTGGTGTTATCTATGAT
CGTGTAGGCCTGCGTATATTAAGTCGTATCGATTTCCATCAGGCACTCAAGCTTCAACCAAACTTAGCCGATGCTTATAA
CTTCCTCGGAATTTATTACACCCAAGAGAGTGAGTTTGAAAGTGCTTATGAAGCATTTGATGCTGTTTTAGAGCTGTCTC
CTGATTATGATTACGCCTTTTTAAATCGAGGGATTTCGCTTTATTATGGTGAGCGCATGGAGCTCGCTGTATCAGATATG
AGCACCTTCTATGAGCGTGAACCATCAGATGGCTATCGTGCATTATGGCTATATTTAGTCGAGCGCGAAATTGATGAGCA
GAATGCTCAAGCACAACTAGCGACCAACCGCGAAAAACTACAGTCAGATGCTTGGTCAACGGCTCTAGTTGATTACTACT
TAGGTCAAAAAAGTAAAGAAGATGTTTTTAGCTTAGCAAAAGAGGGGCTAAAGCACCCTAATGAGTATGCCGAGCGCCTT
TGTGAAGCCTATTTTTATATGGCTAAAATTGCACAAAAGCAGGGTGATAACGTACTGGCAGCCAATTACTTTAGGCTGGC
ATTGGCAACCAACATCTATGACTTTGTTGAGCACCGCTTTGCCAGACTTGAACTTGCAAGAACAAATGAAGCACTTAAGC
TAGCGATTAACTAA

Upstream 100 bases:

>100_bases
ATTAATCTGTGTTAATTTGATTATTTTCAATTCCTTGATAGCAGTCGTGATAAGGGGTTGCTATGATTGGTGCTATTGGC
GAAATCAAAAGGTTAAATGG

Downstream 100 bases:

>100_bases
CAGTCTAGCTATCAGTTTAAAAAAGCCTCCTTTGGAGGCTTTTTTATTGCGACTAATTTGCAAAAGTGAGGCATAGCGAT
TTAACAGCCTAGTTTGGTAG

Product: lipoprotein NlpI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MNQKIRTAVVVAMVSVSMLLTGCVSTQSGSEQQASIRVAPVSPDYKLEITLAKLNEILASVELTPEQRARFHYDRGVIYD
RVGLRILSRIDFHQALKLQPNLADAYNFLGIYYTQESEFESAYEAFDAVLELSPDYDYAFLNRGISLYYGERMELAVSDM
STFYEREPSDGYRALWLYLVEREIDEQNAQAQLATNREKLQSDAWSTALVDYYLGQKSKEDVFSLAKEGLKHPNEYAERL
CEAYFYMAKIAQKQGDNVLAANYFRLALATNIYDFVEHRFARLELARTNEALKLAIN

Sequences:

>Translated_297_residues
MNQKIRTAVVVAMVSVSMLLTGCVSTQSGSEQQASIRVAPVSPDYKLEITLAKLNEILASVELTPEQRARFHYDRGVIYD
RVGLRILSRIDFHQALKLQPNLADAYNFLGIYYTQESEFESAYEAFDAVLELSPDYDYAFLNRGISLYYGERMELAVSDM
STFYEREPSDGYRALWLYLVEREIDEQNAQAQLATNREKLQSDAWSTALVDYYLGQKSKEDVFSLAKEGLKHPNEYAERL
CEAYFYMAKIAQKQGDNVLAANYFRLALATNIYDFVEHRFARLELARTNEALKLAIN
>Mature_297_residues
MNQKIRTAVVVAMVSVSMLLTGCVSTQSGSEQQASIRVAPVSPDYKLEITLAKLNEILASVELTPEQRARFHYDRGVIYD
RVGLRILSRIDFHQALKLQPNLADAYNFLGIYYTQESEFESAYEAFDAVLELSPDYDYAFLNRGISLYYGERMELAVSDM
STFYEREPSDGYRALWLYLVEREIDEQNAQAQLATNREKLQSDAWSTALVDYYLGQKSKEDVFSLAKEGLKHPNEYAERL
CEAYFYMAKIAQKQGDNVLAANYFRLALATNIYDFVEHRFARLELARTNEALKLAIN

Specific function: May be involved in cell division. Overexpression of nlpI results in the loss of the rod morphology and the formation of single prolate ellipsoids and pairs of prolate ellipsoids joined by partial constrictions [H]

COG id: COG4785

COG function: function code R; Lipoprotein NlpI, contains TPR repeats

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1789554, Length=275, Percent_Identity=43.2727272727273, Blast_Score=239, Evalue=1e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 34029; Mature: 34029

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQKIRTAVVVAMVSVSMLLTGCVSTQSGSEQQASIRVAPVSPDYKLEITLAKLNEILAS
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHH
VELTPEQRARFHYDRGVIYDRVGLRILSRIDFHQALKLQPNLADAYNFLGIYYTQESEFE
CCCCHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCEEEEEECCHHHH
SAYEAFDAVLELSPDYDYAFLNRGISLYYGERMELAVSDMSTFYEREPSDGYRALWLYLV
HHHHHHHHHHHCCCCCCHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
EREIDEQNAQAQLATNREKLQSDAWSTALVDYYLGQKSKEDVFSLAKEGLKHPNEYAERL
HHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHH
CEAYFYMAKIAQKQGDNVLAANYFRLALATNIYDFVEHRFARLELARTNEALKLAIN
HHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
>Mature Secondary Structure
MNQKIRTAVVVAMVSVSMLLTGCVSTQSGSEQQASIRVAPVSPDYKLEITLAKLNEILAS
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHH
VELTPEQRARFHYDRGVIYDRVGLRILSRIDFHQALKLQPNLADAYNFLGIYYTQESEFE
CCCCHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCEEEEEECCHHHH
SAYEAFDAVLELSPDYDYAFLNRGISLYYGERMELAVSDMSTFYEREPSDGYRALWLYLV
HHHHHHHHHHHCCCCCCHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
EREIDEQNAQAQLATNREKLQSDAWSTALVDYYLGQKSKEDVFSLAKEGLKHPNEYAERL
HHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHH
CEAYFYMAKIAQKQGDNVLAANYFRLALATNIYDFVEHRFARLELARTNEALKLAIN
HHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]