Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624950

Identifier: 167624950

GI number: 167624950

Start: 3704150

End: 3704542

Strand: Reverse

Name: 167624950

Synonym: Shal_3037

Alternate gene names: NA

Gene position: 3704542-3704150 (Counterclockwise)

Preceding gene: 167624951

Following gene: 167624945

Centisome position: 70.87

GC content: 48.35

Gene sequence:

>393_bases
ATGGATATCGATGAAAAGATCCGTCAGCAGCTGCTAAAGGAGTCGGAGCAGATAAATAATCAGCTTAAACGCGACCCAAG
CTTATTCGCCATGCTAGGCGATGCCTACAAGGGCCGCTTAGGTGGCTGGTTGATATTAATGAGCATTATTGCCTTTCTAT
TAAGCTTGTTGATGCTGTGGTCGGGCTACCAGTTCTTTTTTGTTGTGATCAGTCCGGTAGCGCTAATCAAGTGGGGGGTA
ACGCTTATGTTGGCAAGCATGATGCAAATTGCGATTAAGATGTGGATCTATAACGAGATGAACCGCAACGCGACCGCCCG
CGAGATAAAGCGTTTGGCGCTGGCTATTGCCAAGCTTCACCCGAAGGGAGAGTCGTCATTAGCGCGTGAATAG

Upstream 100 bases:

>100_bases
TGTGCTTTTTTAGAGCTAGAGAGCGCTTAAAGCAAACACTAGATTCGCATTAGATTCAGCATTAGAGTAAGCATTAGGGG
AAACAGTAGGAGTAGAGATT

Downstream 100 bases:

>100_bases
GTTAATTCACGCGTTTTTGGCCTAGCTATTACAGCTTAGCTATGGGGATTATGTTGATTATAAAAGCTCTGCCACGATCT
GCTTGAGCAAAAAGGTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MDIDEKIRQQLLKESEQINNQLKRDPSLFAMLGDAYKGRLGGWLILMSIIAFLLSLLMLWSGYQFFFVVISPVALIKWGV
TLMLASMMQIAIKMWIYNEMNRNATAREIKRLALAIAKLHPKGESSLARE

Sequences:

>Translated_130_residues
MDIDEKIRQQLLKESEQINNQLKRDPSLFAMLGDAYKGRLGGWLILMSIIAFLLSLLMLWSGYQFFFVVISPVALIKWGV
TLMLASMMQIAIKMWIYNEMNRNATAREIKRLALAIAKLHPKGESSLARE
>Mature_130_residues
MDIDEKIRQQLLKESEQINNQLKRDPSLFAMLGDAYKGRLGGWLILMSIIAFLLSLLMLWSGYQFFFVVISPVALIKWGV
TLMLASMMQIAIKMWIYNEMNRNATAREIKRLALAIAKLHPKGESSLARE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14917; Mature: 14917

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIDEKIRQQLLKESEQINNQLKRDPSLFAMLGDAYKGRLGGWLILMSIIAFLLSLLMLW
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGYQFFFVVISPVALIKWGVTLMLASMMQIAIKMWIYNEMNRNATAREIKRLALAIAKLH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
PKGESSLARE
CCCCCCCCCC
>Mature Secondary Structure
MDIDEKIRQQLLKESEQINNQLKRDPSLFAMLGDAYKGRLGGWLILMSIIAFLLSLLMLW
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGYQFFFVVISPVALIKWGVTLMLASMMQIAIKMWIYNEMNRNATAREIKRLALAIAKLH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
PKGESSLARE
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA