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The map label for this gene is 167624941

Identifier: 167624941

GI number: 167624941

Start: 3696352

End: 3697731

Strand: Reverse

Name: 167624941

Synonym: Shal_3028

Alternate gene names: NA

Gene position: 3697731-3696352 (Counterclockwise)

Preceding gene: 167624942

Following gene: 167624936

Centisome position: 70.74

GC content: 45.8

Gene sequence:

>1380_bases
TTGCATACTATTGAGCAGTTAACATCGGGACAGTTAAAAGGGATAACACGGCTACAACTCTCAAAGGGGCTGACAGCGTT
TCCGCAAGAGATATTTGAGCTTGCCGACACGCTAGAAATACTCGACCTATCGGGTAATCAACTTAGTGATTTACCCGCAA
ACTTTAGCGATTTGCATCAATTAAAAATCCTATTTCTAACCAACAACTGTTTTGATTCTATTCCGGCCGTACTAGCCCTG
TGCCCTAAGCTTGAAATGATCAGCTTCAAATCGAACAAATTAACGCAGCTGCCTGAAAAAGCACTCCCCGATAATACCCG
CTGGCTTATCTTAACGGATAATAATCTCGAATCTTTGCCTGAGGATATGGGGCGATTGCACCGCTTGCAAAAGTTAGCCC
TAGCGGGCAATAAGCTCACGTGTCTACCTGAGAGTATGGCTGAATGTACCAACTTAGAGCTCGCACGCTTATCGGCTAAT
GCCTTTAAGTCATTGCCAGATTGGCTATTTCAGTTACCTCGTCTGAGCTGGTTAGCGCTTGATGGGAGCCCGCTCATACC
GCAGCAAGAGTTAGCCGATAAAGTGCGTACAGATGTTGTCTCTATGCCCAGTGTTAGCCTTGAAGATATCGAACTGAAAG
AGATTATTGGCCAAGGTGCATCGGGTGTGATTTACCGAGCGATATGGGTTAAGCAGCCTGTTTCGTTGATGGGGACGCCG
CTCGATATTGCCGTTAAAATATTTAAAGGTGAGGTCACGAGCGACGGATACCCAAAAGATGAACTGGCCAACTGTTTGCA
GGCGAGGCAGCATAGCAATCTGATAAAGGTCGTGGCTCAGCTTAAGCAGGCCGATAAATCGGGTCTCGTCATGGAGCTTA
TTCCTAGTCATTTCCAAAACTTAGGTCTGCCACCCTCACTGGATACTTGTACTCGAGATACCTTCACCGATAAGTCTAGC
TTTGAGATTAAAGAGGTATTAAATATCTTGAAACAGATGGCGTCGGGGCTGACTCATCTGCACCAGAATCGAGTCAGTCA
TGGTGATATTTATGCTCATAACACCATGTTCAATATGAACGTAGAGATCTTATTCGGCGACTTTGGCGCGGCGACGAATT
TAAGCCAACTGCCTTTACTGCAAAGAGAGGCGATGGAGGCAATAGAGGTTCGTGCCTTGGGCTGCCTAATAGAGGATTTA
GCCGAGCACTGTTTACAAAATCCTACAGAAGCAAGCCAAGCGATTCTTGCCGAGTTGCTTAAGTTAAAACAGACGTGTTT
ACAGCCAAATTTAGGGTTACGTCCGCGATTCAAAGAGATAGATGCGCTGTTACAACAGATGCTCGAGCAGTTAGATCCTG
AAACCTGTTTAAGTGCTTAG

Upstream 100 bases:

>100_bases
TTAGCTCCATAATGCGTTAGCTTCTAGCATTTGGCTTTCTCATTGATGGAGAATCGTATAGTATTGCGCGCTGTTTTTTA
TCAGGGTTAAGGTAAGGGTT

Downstream 100 bases:

>100_bases
AGATTGCTTAGCATTAAGCATAAAAATGCCGTCGATTGACTAATGCCATTCACTTAAGGAAGTGACTCAGAGAAATCTGA
TGACTTTGAAAGATAAGAAT

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: Leucine-Rich Repeat-Containing Protein; Protein Kinase; Leucine-Rich Repeat Protein; Cytoplasmic Membrane Protein; Leucine-Rich Repeat-Containing Protein Kinase; Ras Family; Miro-Like Protein; Outer Membrane Protein; Protein Kinase Domain-Containing Protein; Kinase; Phosphoprotein Phosphatase; Leucine Rich Repeat Domain Protein; Leucine-Rich Repeat-Containing Protein Typical Subtype; Serine/Threonine-Protein Kinase-Like Domain Protein; Miro Domain Protein; Outermembrane Protein; Miro Domain-Containing Protein; Serine/Threonine-Protein Kinase-Like Domain; Protein KinaseLeucine-Rich Repeat Protein; Lipoprotein

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MHTIEQLTSGQLKGITRLQLSKGLTAFPQEIFELADTLEILDLSGNQLSDLPANFSDLHQLKILFLTNNCFDSIPAVLAL
CPKLEMISFKSNKLTQLPEKALPDNTRWLILTDNNLESLPEDMGRLHRLQKLALAGNKLTCLPESMAECTNLELARLSAN
AFKSLPDWLFQLPRLSWLALDGSPLIPQQELADKVRTDVVSMPSVSLEDIELKEIIGQGASGVIYRAIWVKQPVSLMGTP
LDIAVKIFKGEVTSDGYPKDELANCLQARQHSNLIKVVAQLKQADKSGLVMELIPSHFQNLGLPPSLDTCTRDTFTDKSS
FEIKEVLNILKQMASGLTHLHQNRVSHGDIYAHNTMFNMNVEILFGDFGAATNLSQLPLLQREAMEAIEVRALGCLIEDL
AEHCLQNPTEASQAILAELLKLKQTCLQPNLGLRPRFKEIDALLQQMLEQLDPETCLSA

Sequences:

>Translated_459_residues
MHTIEQLTSGQLKGITRLQLSKGLTAFPQEIFELADTLEILDLSGNQLSDLPANFSDLHQLKILFLTNNCFDSIPAVLAL
CPKLEMISFKSNKLTQLPEKALPDNTRWLILTDNNLESLPEDMGRLHRLQKLALAGNKLTCLPESMAECTNLELARLSAN
AFKSLPDWLFQLPRLSWLALDGSPLIPQQELADKVRTDVVSMPSVSLEDIELKEIIGQGASGVIYRAIWVKQPVSLMGTP
LDIAVKIFKGEVTSDGYPKDELANCLQARQHSNLIKVVAQLKQADKSGLVMELIPSHFQNLGLPPSLDTCTRDTFTDKSS
FEIKEVLNILKQMASGLTHLHQNRVSHGDIYAHNTMFNMNVEILFGDFGAATNLSQLPLLQREAMEAIEVRALGCLIEDL
AEHCLQNPTEASQAILAELLKLKQTCLQPNLGLRPRFKEIDALLQQMLEQLDPETCLSA
>Mature_459_residues
MHTIEQLTSGQLKGITRLQLSKGLTAFPQEIFELADTLEILDLSGNQLSDLPANFSDLHQLKILFLTNNCFDSIPAVLAL
CPKLEMISFKSNKLTQLPEKALPDNTRWLILTDNNLESLPEDMGRLHRLQKLALAGNKLTCLPESMAECTNLELARLSAN
AFKSLPDWLFQLPRLSWLALDGSPLIPQQELADKVRTDVVSMPSVSLEDIELKEIIGQGASGVIYRAIWVKQPVSLMGTP
LDIAVKIFKGEVTSDGYPKDELANCLQARQHSNLIKVVAQLKQADKSGLVMELIPSHFQNLGLPPSLDTCTRDTFTDKSS
FEIKEVLNILKQMASGLTHLHQNRVSHGDIYAHNTMFNMNVEILFGDFGAATNLSQLPLLQREAMEAIEVRALGCLIEDL
AEHCLQNPTEASQAILAELLKLKQTCLQPNLGLRPRFKEIDALLQQMLEQLDPETCLSA

Specific function: Unknown

COG id: COG4886

COG function: function code S; Leucine-rich repeat (LRR) protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI110825984, Length=176, Percent_Identity=36.3636363636364, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI6912638, Length=178, Percent_Identity=37.0786516853933, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI95113664, Length=194, Percent_Identity=34.020618556701, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI238908508, Length=188, Percent_Identity=33.5106382978723, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI34577083, Length=161, Percent_Identity=36.0248447204969, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI55770895, Length=201, Percent_Identity=32.3383084577114, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI8923909, Length=201, Percent_Identity=32.3383084577114, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI61742786, Length=267, Percent_Identity=29.5880149812734, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI61742784, Length=267, Percent_Identity=29.5880149812734, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI187829877, Length=179, Percent_Identity=32.4022346368715, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI62241040, Length=179, Percent_Identity=32.4022346368715, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI187829871, Length=179, Percent_Identity=32.4022346368715, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI197333706, Length=165, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI34222199, Length=165, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI45827729, Length=182, Percent_Identity=33.5164835164835, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI256017180, Length=160, Percent_Identity=30.625, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI45827731, Length=182, Percent_Identity=33.5164835164835, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI41281398, Length=217, Percent_Identity=31.3364055299539, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI33859670, Length=160, Percent_Identity=30.625, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI16904383, Length=186, Percent_Identity=31.1827956989247, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI122937315, Length=162, Percent_Identity=29.6296296296296, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI256017174, Length=160, Percent_Identity=30.625, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI157743290, Length=157, Percent_Identity=34.3949044585987, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI154091020, Length=152, Percent_Identity=29.6052631578947, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI190014581, Length=159, Percent_Identity=33.9622641509434, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI153792305, Length=164, Percent_Identity=32.9268292682927, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI19923729, Length=177, Percent_Identity=29.3785310734463, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI21361633, Length=177, Percent_Identity=35.5932203389831, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI40217803, Length=159, Percent_Identity=32.0754716981132, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI194394161, Length=165, Percent_Identity=29.6969696969697, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI21389431, Length=188, Percent_Identity=27.6595744680851, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI197333692, Length=136, Percent_Identity=32.3529411764706, Blast_Score=66, Evalue=7e-11,
Organism=Homo sapiens, GI21245134, Length=136, Percent_Identity=32.3529411764706, Blast_Score=66, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI71998904, Length=207, Percent_Identity=31.4009661835749, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI71998900, Length=207, Percent_Identity=31.4009661835749, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17537883, Length=207, Percent_Identity=31.4009661835749, Blast_Score=75, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17552452, Length=185, Percent_Identity=31.3513513513514, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71993778, Length=189, Percent_Identity=29.1005291005291, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71981160, Length=163, Percent_Identity=30.6748466257669, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI71981152, Length=163, Percent_Identity=30.6748466257669, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI71993783, Length=189, Percent_Identity=29.1005291005291, Blast_Score=69, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI71991531, Length=160, Percent_Identity=32.5, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71991525, Length=160, Percent_Identity=32.5, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17550406, Length=158, Percent_Identity=32.2784810126582, Blast_Score=65, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6324929, Length=107, Percent_Identity=39.2523364485981, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24650330, Length=182, Percent_Identity=33.5164835164835, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI221379725, Length=173, Percent_Identity=32.3699421965318, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI221379722, Length=173, Percent_Identity=32.3699421965318, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI281362655, Length=182, Percent_Identity=33.5164835164835, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI281362657, Length=182, Percent_Identity=33.5164835164835, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24650336, Length=182, Percent_Identity=33.5164835164835, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24650334, Length=182, Percent_Identity=33.5164835164835, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24650332, Length=182, Percent_Identity=33.5164835164835, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI281362653, Length=182, Percent_Identity=33.5164835164835, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI116007092, Length=182, Percent_Identity=33.5164835164835, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI62472958, Length=182, Percent_Identity=33.5164835164835, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI281362651, Length=182, Percent_Identity=33.5164835164835, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI19922294, Length=169, Percent_Identity=31.3609467455621, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI17933612, Length=167, Percent_Identity=34.1317365269461, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI19922706, Length=146, Percent_Identity=30.8219178082192, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50990; Mature: 50990

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS00107 PROTEIN_KINASE_ATP ; PS50011 PROTEIN_KINASE_DOM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTIEQLTSGQLKGITRLQLSKGLTAFPQEIFELADTLEILDLSGNQLSDLPANFSDLHQ
CCCHHHHHCCHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
LKILFLTNNCFDSIPAVLALCPKLEMISFKSNKLTQLPEKALPDNTRWLILTDNNLESLP
EEEEEEECCHHHHHHHHHHHCCCHHEEECCCCCHHHCCHHHCCCCCEEEEEECCCHHHHH
EDMGRLHRLQKLALAGNKLTCLPESMAECTNLELARLSANAFKSLPDWLFQLPRLSWLAL
HHHHHHHHHHHHHHCCCCEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
DGSPLIPQQELADKVRTDVVSMPSVSLEDIELKEIIGQGASGVIYRAIWVKQPVSLMGTP
CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHCCC
LDIAVKIFKGEVTSDGYPKDELANCLQARQHSNLIKVVAQLKQADKSGLVMELIPSHFQN
HHHEEHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LGLPPSLDTCTRDTFTDKSSFEIKEVLNILKQMASGLTHLHQNRVSHGDIYAHNTMFNMN
CCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECEEEEEE
VEILFGDFGAATNLSQLPLLQREAMEAIEVRALGCLIEDLAEHCLQNPTEASQAILAELL
EEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
KLKQTCLQPNLGLRPRFKEIDALLQQMLEQLDPETCLSA
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCC
>Mature Secondary Structure
MHTIEQLTSGQLKGITRLQLSKGLTAFPQEIFELADTLEILDLSGNQLSDLPANFSDLHQ
CCCHHHHHCCHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
LKILFLTNNCFDSIPAVLALCPKLEMISFKSNKLTQLPEKALPDNTRWLILTDNNLESLP
EEEEEEECCHHHHHHHHHHHCCCHHEEECCCCCHHHCCHHHCCCCCEEEEEECCCHHHHH
EDMGRLHRLQKLALAGNKLTCLPESMAECTNLELARLSANAFKSLPDWLFQLPRLSWLAL
HHHHHHHHHHHHHHCCCCEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
DGSPLIPQQELADKVRTDVVSMPSVSLEDIELKEIIGQGASGVIYRAIWVKQPVSLMGTP
CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHCCC
LDIAVKIFKGEVTSDGYPKDELANCLQARQHSNLIKVVAQLKQADKSGLVMELIPSHFQN
HHHEEHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LGLPPSLDTCTRDTFTDKSSFEIKEVLNILKQMASGLTHLHQNRVSHGDIYAHNTMFNMN
CCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECEEEEEE
VEILFGDFGAATNLSQLPLLQREAMEAIEVRALGCLIEDLAEHCLQNPTEASQAILAELL
EEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
KLKQTCLQPNLGLRPRFKEIDALLQQMLEQLDPETCLSA
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA