Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is fabZ [H]

Identifier: 167624884

GI number: 167624884

Start: 3613708

End: 3614169

Strand: Reverse

Name: fabZ [H]

Synonym: Shal_2970

Alternate gene names: 167624884

Gene position: 3614169-3613708 (Counterclockwise)

Preceding gene: 167624885

Following gene: 167624883

Centisome position: 69.15

GC content: 41.56

Gene sequence:

>462_bases
GTGTCAAATCAATTGAATACAATGGATATCAAAGAGATCCTAAAATTTTTACCTCATAGGTATCCATTTTTATTGATCGA
TAGAGTGCTAGATTTCACGCCAGGTGAAACCTTACATGCTATTAAGAACGTCACTATTAATGAACCATTTTTCCAGGGAC
ACTTCCCGGTTCAGCCTGTGATGCCAGGAGTCTTAATTTTAGAAGCAATGGCACAGGCGACTGGTCTATTGGCTTTTAAA
ACCATGAGTGAAGAGCCTTCTAATGACGCGTTATACTATTTCGCTGGTATCGACAAAGCGCGATTTAAGCGTGTTGTTGA
GCCAGGCGACCAACTTCATTTTGAAGTGCAAATGATTAAAGAGCGCCGCGGAATTGGCGTGTTTACTGGCGTTGCTAAAG
TGGATGGCGAGATTGTTTGTTCAGCTGAAATCATGTGTGCACGTAGAGAGATTTCTAAGTGA

Upstream 100 bases:

>100_bases
CGTTTTAGACAGTTAGATACGCTATTCCAACGTGTGAAGACATTGGAAAATAACGTAAAGTAAATGAAATACTGCTTTGT
GCAGATAAAGGAAAATTTTC

Downstream 100 bases:

>100_bases
TTGATAAATTAGCTTATATCCACCCAGATGCCAAAATAGGCAAAAATGTTACTATTGGTCCATGGACTTATATTGGCGCT
GATGTCGAAATTGGTGATGA

Product: (3R)-hydroxymyristoyl-ACP dehydratase

Products: NA

Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase [H]

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MSNQLNTMDIKEILKFLPHRYPFLLIDRVLDFTPGETLHAIKNVTINEPFFQGHFPVQPVMPGVLILEAMAQATGLLAFK
TMSEEPSNDALYYFAGIDKARFKRVVEPGDQLHFEVQMIKERRGIGVFTGVAKVDGEIVCSAEIMCARREISK

Sequences:

>Translated_153_residues
MSNQLNTMDIKEILKFLPHRYPFLLIDRVLDFTPGETLHAIKNVTINEPFFQGHFPVQPVMPGVLILEAMAQATGLLAFK
TMSEEPSNDALYYFAGIDKARFKRVVEPGDQLHFEVQMIKERRGIGVFTGVAKVDGEIVCSAEIMCARREISK
>Mature_152_residues
SNQLNTMDIKEILKFLPHRYPFLLIDRVLDFTPGETLHAIKNVTINEPFFQGHFPVQPVMPGVLILEAMAQATGLLAFKT
MSEEPSNDALYYFAGIDKARFKRVVEPGDQLHFEVQMIKERRGIGVFTGVAKVDGEIVCSAEIMCARREISK

Specific function: Involved in saturated fatty acids biosynthesis [H]

COG id: COG0764

COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioester dehydratase family. FabZ subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786377, Length=149, Percent_Identity=63.758389261745, Blast_Score=195, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013114
- InterPro:   IPR010084 [H]

Pfam domain/function: PF07977 FabA [H]

EC number: 4.2.1.-

Molecular weight: Translated: 17285; Mature: 17154

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNQLNTMDIKEILKFLPHRYPFLLIDRVLDFTPGETLHAIKNVTINEPFFQGHFPVQPV
CCCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCHH
MPGVLILEAMAQATGLLAFKTMSEEPSNDALYYFAGIDKARFKRVVEPGDQLHFEVQMIK
CHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHH
ERRGIGVFTGVAKVDGEIVCSAEIMCARREISK
HHCCCEEEECHHHCCCEEEEHHHHHHHHHHCCC
>Mature Secondary Structure 
SNQLNTMDIKEILKFLPHRYPFLLIDRVLDFTPGETLHAIKNVTINEPFFQGHFPVQPV
CCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCHH
MPGVLILEAMAQATGLLAFKTMSEEPSNDALYYFAGIDKARFKRVVEPGDQLHFEVQMIK
CHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHH
ERRGIGVFTGVAKVDGEIVCSAEIMCARREISK
HHCCCEEEECHHHCCCEEEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA