| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is fabZ [H]
Identifier: 167624884
GI number: 167624884
Start: 3613708
End: 3614169
Strand: Reverse
Name: fabZ [H]
Synonym: Shal_2970
Alternate gene names: 167624884
Gene position: 3614169-3613708 (Counterclockwise)
Preceding gene: 167624885
Following gene: 167624883
Centisome position: 69.15
GC content: 41.56
Gene sequence:
>462_bases GTGTCAAATCAATTGAATACAATGGATATCAAAGAGATCCTAAAATTTTTACCTCATAGGTATCCATTTTTATTGATCGA TAGAGTGCTAGATTTCACGCCAGGTGAAACCTTACATGCTATTAAGAACGTCACTATTAATGAACCATTTTTCCAGGGAC ACTTCCCGGTTCAGCCTGTGATGCCAGGAGTCTTAATTTTAGAAGCAATGGCACAGGCGACTGGTCTATTGGCTTTTAAA ACCATGAGTGAAGAGCCTTCTAATGACGCGTTATACTATTTCGCTGGTATCGACAAAGCGCGATTTAAGCGTGTTGTTGA GCCAGGCGACCAACTTCATTTTGAAGTGCAAATGATTAAAGAGCGCCGCGGAATTGGCGTGTTTACTGGCGTTGCTAAAG TGGATGGCGAGATTGTTTGTTCAGCTGAAATCATGTGTGCACGTAGAGAGATTTCTAAGTGA
Upstream 100 bases:
>100_bases CGTTTTAGACAGTTAGATACGCTATTCCAACGTGTGAAGACATTGGAAAATAACGTAAAGTAAATGAAATACTGCTTTGT GCAGATAAAGGAAAATTTTC
Downstream 100 bases:
>100_bases TTGATAAATTAGCTTATATCCACCCAGATGCCAAAATAGGCAAAAATGTTACTATTGGTCCATGGACTTATATTGGCGCT GATGTCGAAATTGGTGATGA
Product: (3R)-hydroxymyristoyl-ACP dehydratase
Products: NA
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase [H]
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MSNQLNTMDIKEILKFLPHRYPFLLIDRVLDFTPGETLHAIKNVTINEPFFQGHFPVQPVMPGVLILEAMAQATGLLAFK TMSEEPSNDALYYFAGIDKARFKRVVEPGDQLHFEVQMIKERRGIGVFTGVAKVDGEIVCSAEIMCARREISK
Sequences:
>Translated_153_residues MSNQLNTMDIKEILKFLPHRYPFLLIDRVLDFTPGETLHAIKNVTINEPFFQGHFPVQPVMPGVLILEAMAQATGLLAFK TMSEEPSNDALYYFAGIDKARFKRVVEPGDQLHFEVQMIKERRGIGVFTGVAKVDGEIVCSAEIMCARREISK >Mature_152_residues SNQLNTMDIKEILKFLPHRYPFLLIDRVLDFTPGETLHAIKNVTINEPFFQGHFPVQPVMPGVLILEAMAQATGLLAFKT MSEEPSNDALYYFAGIDKARFKRVVEPGDQLHFEVQMIKERRGIGVFTGVAKVDGEIVCSAEIMCARREISK
Specific function: Involved in saturated fatty acids biosynthesis [H]
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786377, Length=149, Percent_Identity=63.758389261745, Blast_Score=195, Evalue=1e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013114 - InterPro: IPR010084 [H]
Pfam domain/function: PF07977 FabA [H]
EC number: 4.2.1.-
Molecular weight: Translated: 17285; Mature: 17154
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQLNTMDIKEILKFLPHRYPFLLIDRVLDFTPGETLHAIKNVTINEPFFQGHFPVQPV CCCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCHH MPGVLILEAMAQATGLLAFKTMSEEPSNDALYYFAGIDKARFKRVVEPGDQLHFEVQMIK CHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHH ERRGIGVFTGVAKVDGEIVCSAEIMCARREISK HHCCCEEEECHHHCCCEEEEHHHHHHHHHHCCC >Mature Secondary Structure SNQLNTMDIKEILKFLPHRYPFLLIDRVLDFTPGETLHAIKNVTINEPFFQGHFPVQPV CCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCHH MPGVLILEAMAQATGLLAFKTMSEEPSNDALYYFAGIDKARFKRVVEPGDQLHFEVQMIK CHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHH ERRGIGVFTGVAKVDGEIVCSAEIMCARREISK HHCCCEEEECHHHCCCEEEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA