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The map label for this gene is 167624750

Identifier: 167624750

GI number: 167624750

Start: 3446008

End: 3446667

Strand: Reverse

Name: 167624750

Synonym: Shal_2834

Alternate gene names: NA

Gene position: 3446667-3446008 (Counterclockwise)

Preceding gene: 167624754

Following gene: 167624749

Centisome position: 65.94

GC content: 35.15

Gene sequence:

>660_bases
ATGGAGACGAAATCTAAAACCCGTGGTAGGCCTAAGCAAAGTCCAGTACACACTCCATGCCAGCAAAATATATTATCCGT
TGCAAGACGCTTATTTTTAACATTTTCCTATAGCAAGGTGACGACCCGTAAGATTGCAGACGAAGCAGATGTTGATGTCG
CACTCATAGGCTATTACTTTGGCAGTAAAGCTGAACTTTACAAAGCCGTTTTCGACGACATATATGCCCCTTTTTTTGAA
AAGCTCAACCAGTTAAAGCAAGCATCTTCAGAGATAAATACCATCGAAGAACTGTTTATGACTATATTCAACCTCGATAT
TGAACATCCAGAGTTATTAAGTATTATCTATAAAACGCTTGTGCTTAATGATGGTCCTAAACGAAATTATTTTAATAAAC
AAATTCTTAATTATACCGATACTTTCCATGTGAACATTTTTGCTAAATTACAGCGTGATGGATTTATCGATAAAAACTTA
GATGTGGAGCTATTAAAAGATAGCTTTAATGCCTTGGTTATGATGCCATTTTTCTTTTACTCACTAAAAAGTAAAGACTC
ATCTAAAGAGGAAATAACAATCTATTTAAAAAACTTATATAAGCAAAACATCAAATTATTCCTACACGGGTGCACTGTCG
ATCCTATCCCACATCGGTAG

Upstream 100 bases:

>100_bases
CAAAGCATAAATATTTATGTTCATATAAAGTACAACAGAAAGTTAACCTTATACCAAGTGGTATGACTAACTAGGCCGAT
ATCTTAACTTAGGAAAAGGT

Downstream 100 bases:

>100_bases
CTACACATTAATTACACATTAGTTACTCTCTGACACCTTAGCAGCACGATAATGAGTCTGACTCTGCATATTGCCCGCTG
ATGCCTATTGGGATCGCCTT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; Transcriptional Regulator Of TetR Family Protein

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
METKSKTRGRPKQSPVHTPCQQNILSVARRLFLTFSYSKVTTRKIADEADVDVALIGYYFGSKAELYKAVFDDIYAPFFE
KLNQLKQASSEINTIEELFMTIFNLDIEHPELLSIIYKTLVLNDGPKRNYFNKQILNYTDTFHVNIFAKLQRDGFIDKNL
DVELLKDSFNALVMMPFFFYSLKSKDSSKEEITIYLKNLYKQNIKLFLHGCTVDPIPHR

Sequences:

>Translated_219_residues
METKSKTRGRPKQSPVHTPCQQNILSVARRLFLTFSYSKVTTRKIADEADVDVALIGYYFGSKAELYKAVFDDIYAPFFE
KLNQLKQASSEINTIEELFMTIFNLDIEHPELLSIIYKTLVLNDGPKRNYFNKQILNYTDTFHVNIFAKLQRDGFIDKNL
DVELLKDSFNALVMMPFFFYSLKSKDSSKEEITIYLKNLYKQNIKLFLHGCTVDPIPHR
>Mature_219_residues
METKSKTRGRPKQSPVHTPCQQNILSVARRLFLTFSYSKVTTRKIADEADVDVALIGYYFGSKAELYKAVFDDIYAPFFE
KLNQLKQASSEINTIEELFMTIFNLDIEHPELLSIIYKTLVLNDGPKRNYFNKQILNYTDTFHVNIFAKLQRDGFIDKNL
DVELLKDSFNALVMMPFFFYSLKSKDSSKEEITIYLKNLYKQNIKLFLHGCTVDPIPHR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25533; Mature: 25533

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METKSKTRGRPKQSPVHTPCQQNILSVARRLFLTFSYSKVTTRKIADEADVDVALIGYYF
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEEEEHH
GSKAELYKAVFDDIYAPFFEKLNQLKQASSEINTIEELFMTIFNLDIEHPELLSIIYKTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
VLNDGPKRNYFNKQILNYTDTFHVNIFAKLQRDGFIDKNLDVELLKDSFNALVMMPFFFY
HCCCCCCCCHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
SLKSKDSSKEEITIYLKNLYKQNIKLFLHGCTVDPIPHR
HHHCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCC
>Mature Secondary Structure
METKSKTRGRPKQSPVHTPCQQNILSVARRLFLTFSYSKVTTRKIADEADVDVALIGYYF
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEEEEHH
GSKAELYKAVFDDIYAPFFEKLNQLKQASSEINTIEELFMTIFNLDIEHPELLSIIYKTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
VLNDGPKRNYFNKQILNYTDTFHVNIFAKLQRDGFIDKNLDVELLKDSFNALVMMPFFFY
HCCCCCCCCHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
SLKSKDSSKEEITIYLKNLYKQNIKLFLHGCTVDPIPHR
HHHCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA