| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167624730
Identifier: 167624730
GI number: 167624730
Start: 3422047
End: 3422712
Strand: Reverse
Name: 167624730
Synonym: Shal_2813
Alternate gene names: NA
Gene position: 3422712-3422047 (Counterclockwise)
Preceding gene: 167624732
Following gene: 167624729
Centisome position: 65.48
GC content: 45.95
Gene sequence:
>666_bases ATGAGTGCTATGTCGTCAACCGCCATACTTTACTCTTTACGCAATTGTCCCTATGCCGTTCGGGCAAGAATGGCTGTCTA TGTTTCGGGCCGAACTGTTCTGCTACGTGAATTGCGTTTAGATAACAAGCCAGTCGAGTTGTTAGAGGCCTCACCAAAGG GGACCGTGCCAGTACTCGTGCTGCCCAGCGGTGAGGTTATTGAGCAGAGTCTAGAGATCATGCTATGGGCGCTTAGCCGT AGAGATCCAGCTAATTACCTTATTGCTGATAAGTCTGATAGGCAGCAGGAGATGCTAAGGTTGATTGGCCTGTTTGATAA GGAGTTCAAAACCTGTCTGGAAAGCTACCGTAGTGCTAAGCGCTATCATGGTGCAGACCTGTTCACTCGAAGAGCAGACT GTGAACGGTTTTTACAGATGCTTGAGTTAAGACTGCTTAAGCATCAATACCTCGTTTGTGATAAACCCAGTCTTGCCGAT CTCGCAATTATTCCTTTTATTCGTCAATTTTCTCGCATTGAACGTCAATGGTACAGGCAGTCTCCCTACCCAAAGGTTAG AGATTGGTTGAGTGGCTACTTGCAGAGTCGAATGTTCAGTAAAGTTATGGCGAAATTCCCTATATGGTCAGCGTGTAATG ACCAAGTCATCTTTAAAGATGACTGA
Upstream 100 bases:
>100_bases TTGATTTAAACTTAATTGAGCAGGTTCTATATTTTTAATTGCTTGATAAGCGATTTTGCTAGCTTTTTTATCGAACTCGT AGCGAGGGAGTAAAGCCATC
Downstream 100 bases:
>100_bases CCACTAATTTAGCAAGTTAAGATGTTTATCTTCTGTTATCCTTCGCTGTGGCGCTCTATGGTTTTAAACTAAAATTTACT GAAAAAACAGCTTAAAGGCG
Product: glutathione S-transferase domain-containing protein
Products: NA
Alternate protein names: Glutathione S-Transferase; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase N Terminus; Glutathione S-Transferase N-Terminal Domain; Glutathione-S-Transferase Domain-Containing Protein; Glutaredoxin; Rhodanese Domain Protein; Glutathione S-Transferase-Like; Glutathione S-Transferase C-Terminal-Like Domain; Glutathione S-Transferase Domain; Glutathione S-Transferase Family Protein; Glutathione-S-Transferase Domain Protein; Glutathione S-Transferase Omega Class; Glutathione S-Transferase N-Terminal Domain Protein; Stringent Starvation Protein A; Glutathione S-Transferase N Terminal Domain Protein; Rhodanese Domain-Containing Protein; GSH-Dependent Dehydroascorbate Reductase; Glutathione S-Transferase C-Terminal Domain Protein
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MSAMSSTAILYSLRNCPYAVRARMAVYVSGRTVLLRELRLDNKPVELLEASPKGTVPVLVLPSGEVIEQSLEIMLWALSR RDPANYLIADKSDRQQEMLRLIGLFDKEFKTCLESYRSAKRYHGADLFTRRADCERFLQMLELRLLKHQYLVCDKPSLAD LAIIPFIRQFSRIERQWYRQSPYPKVRDWLSGYLQSRMFSKVMAKFPIWSACNDQVIFKDD
Sequences:
>Translated_221_residues MSAMSSTAILYSLRNCPYAVRARMAVYVSGRTVLLRELRLDNKPVELLEASPKGTVPVLVLPSGEVIEQSLEIMLWALSR RDPANYLIADKSDRQQEMLRLIGLFDKEFKTCLESYRSAKRYHGADLFTRRADCERFLQMLELRLLKHQYLVCDKPSLAD LAIIPFIRQFSRIERQWYRQSPYPKVRDWLSGYLQSRMFSKVMAKFPIWSACNDQVIFKDD >Mature_220_residues SAMSSTAILYSLRNCPYAVRARMAVYVSGRTVLLRELRLDNKPVELLEASPKGTVPVLVLPSGEVIEQSLEIMLWALSRR DPANYLIADKSDRQQEMLRLIGLFDKEFKTCLESYRSAKRYHGADLFTRRADCERFLQMLELRLLKHQYLVCDKPSLADL AIIPFIRQFSRIERQWYRQSPYPKVRDWLSGYLQSRMFSKVMAKFPIWSACNDQVIFKDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25840; Mature: 25708
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAMSSTAILYSLRNCPYAVRARMAVYVSGRTVLLRELRLDNKPVELLEASPKGTVPVLV CCCCHHHHHHHHHHCCCHHHHHHHHEEECCHHHHHHHHHCCCCCHHHHCCCCCCCEEEEE LPSGEVIEQSLEIMLWALSRRDPANYLIADKSDRQQEMLRLIGLFDKEFKTCLESYRSAK ECCCHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYHGADLFTRRADCERFLQMLELRLLKHQYLVCDKPSLADLAIIPFIRQFSRIERQWYRQ HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHC SPYPKVRDWLSGYLQSRMFSKVMAKFPIWSACNDQVIFKDD CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECC >Mature Secondary Structure SAMSSTAILYSLRNCPYAVRARMAVYVSGRTVLLRELRLDNKPVELLEASPKGTVPVLV CCCHHHHHHHHHHCCCHHHHHHHHEEECCHHHHHHHHHCCCCCHHHHCCCCCCCEEEEE LPSGEVIEQSLEIMLWALSRRDPANYLIADKSDRQQEMLRLIGLFDKEFKTCLESYRSAK ECCCHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYHGADLFTRRADCERFLQMLELRLLKHQYLVCDKPSLADLAIIPFIRQFSRIERQWYRQ HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHC SPYPKVRDWLSGYLQSRMFSKVMAKFPIWSACNDQVIFKDD CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA