Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624714

Identifier: 167624714

GI number: 167624714

Start: 3401221

End: 3401799

Strand: Reverse

Name: 167624714

Synonym: Shal_2796

Alternate gene names: NA

Gene position: 3401799-3401221 (Counterclockwise)

Preceding gene: 167624715

Following gene: 167624713

Centisome position: 65.08

GC content: 45.6

Gene sequence:

>579_bases
ATGAATGCTAAAATTTTATTACCCATCGCGCTACTGACACTATCTGGAACGGCTCTTGCCGATGATGCAACAACGACCCT
TCACTGGAAAGGGATAGTACCGACTGTTGTTCCTGGTGCCGGAGTTATCATCACTGGTCCTTCTGGACGTGTTCCATACA
TAGATACGGCAGGACTTGATGTTAAAGACACCACAGGTGTTTTCACTTCAGATCAGATCTCTTTAGAACTGCATTACCGT
TTATGTACCGATGGCAGTGCGCCAGTTGAAGGCGTTTGTGCTAGCGGATTTATGCAAGGTGAAGTTGCAGAAGCGGTTGG
CGATATTATTCCCGATGCATCTTGGACAATGAGTTCACTAGAGACGGTTATTGGTACGCTAGACACTACAGGTGTGGGGA
CTGTTGTTAAGATGGAAGGCGCACCAATGGAAAAGTCTAAGCCTGTTGTTGCAACAACGGGTACCGTTACTTTTACTACT
GAAAACACTGAAAGTGTTGAAACCGCAATGGGCACAGAGTTGAAGCCTGGTCAAAACATCGAAGTTCACACCGTTATCAA
TTCAGCGAAAGCTATCTAA

Upstream 100 bases:

>100_bases
CTATCAGACATATTTGCAAAAGAAAGTGATTTATTACCGGTTTAGGTATTTATTTTTAATAAGCAAGTATGGCGAATAAA
TGTTTAACGAGGATGTTTCT

Downstream 100 bases:

>100_bases
GCCTACGTTTTCCTCAGACTTATCAAGAGCCAACTATGACTTATATAAAAGTTATTTTTTCTGCATGTCTACTATTTGCG
GTAAGTGATGCCTTGGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MNAKILLPIALLTLSGTALADDATTTLHWKGIVPTVVPGAGVIITGPSGRVPYIDTAGLDVKDTTGVFTSDQISLELHYR
LCTDGSAPVEGVCASGFMQGEVAEAVGDIIPDASWTMSSLETVIGTLDTTGVGTVVKMEGAPMEKSKPVVATTGTVTFTT
ENTESVETAMGTELKPGQNIEVHTVINSAKAI

Sequences:

>Translated_192_residues
MNAKILLPIALLTLSGTALADDATTTLHWKGIVPTVVPGAGVIITGPSGRVPYIDTAGLDVKDTTGVFTSDQISLELHYR
LCTDGSAPVEGVCASGFMQGEVAEAVGDIIPDASWTMSSLETVIGTLDTTGVGTVVKMEGAPMEKSKPVVATTGTVTFTT
ENTESVETAMGTELKPGQNIEVHTVINSAKAI
>Mature_192_residues
MNAKILLPIALLTLSGTALADDATTTLHWKGIVPTVVPGAGVIITGPSGRVPYIDTAGLDVKDTTGVFTSDQISLELHYR
LCTDGSAPVEGVCASGFMQGEVAEAVGDIIPDASWTMSSLETVIGTLDTTGVGTVVKMEGAPMEKSKPVVATTGTVTFTT
ENTESVETAMGTELKPGQNIEVHTVINSAKAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19776; Mature: 19776

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAKILLPIALLTLSGTALADDATTTLHWKGIVPTVVPGAGVIITGPSGRVPYIDTAGLD
CCCEEEEEEEEEEECCCEECCCCCEEEEECCCCCEECCCCCEEEECCCCCCCEEECCCCC
VKDTTGVFTSDQISLELHYRLCTDGSAPVEGVCASGFMQGEVAEAVGDIIPDASWTMSSL
CCCCCCEEECCEEEEEEEEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCCCHHHH
ETVIGTLDTTGVGTVVKMEGAPMEKSKPVVATTGTVTFTTENTESVETAMGTELKPGQNI
HHHHHCCCCCCCCEEEEECCCCCCCCCCEEEECCEEEEEECCCCHHHHHHCCCCCCCCCE
EVHTVINSAKAI
EEEEEECCCCCC
>Mature Secondary Structure
MNAKILLPIALLTLSGTALADDATTTLHWKGIVPTVVPGAGVIITGPSGRVPYIDTAGLD
CCCEEEEEEEEEEECCCEECCCCCEEEEECCCCCEECCCCCEEEECCCCCCCEEECCCCC
VKDTTGVFTSDQISLELHYRLCTDGSAPVEGVCASGFMQGEVAEAVGDIIPDASWTMSSL
CCCCCCEEECCEEEEEEEEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCCCHHHH
ETVIGTLDTTGVGTVVKMEGAPMEKSKPVVATTGTVTFTTENTESVETAMGTELKPGQNI
HHHHHCCCCCCCCEEEEECCCCCCCCCCEEEECCEEEEEECCCCHHHHHHCCCCCCCCCE
EVHTVINSAKAI
EEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA