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The map label for this gene is yagX [C]

Identifier: 167624712

GI number: 167624712

Start: 3397713

End: 3400655

Strand: Reverse

Name: yagX [C]

Synonym: Shal_2794

Alternate gene names: 167624712

Gene position: 3400655-3397713 (Counterclockwise)

Preceding gene: 167624713

Following gene: 167624711

Centisome position: 65.06

GC content: 43.26

Gene sequence:

>2943_bases
ATGAGATACAACAAAATCGCCCTATCGATCCTATTTGGCTTATCTTGCACGCTTACCCCACAGTTATCTTTACCCGTATA
TGCCTCGGTGAAGAGTGAGGGGATTGCAATCCCTGATGAGTTTGCCGAGCTCTATTCTGGCAGCACTGAGGCGTTTGATT
TTCAGCTAGCCAGTGCTAAAGAGCAGTTGGTTATTAAGCTCAACTCAACGCCTACCTCTGCGTCTTTAAATAGGGAAAGC
AAGGTCAGTGTTGAGCAATACTTGACCCGTCTGAATGTTAAGCGAGAGGCGGTGGCTGACATTATCACGGCAATGAAAAA
TATTACGACATCTTCTTTATGTCTGGGAAAGGTGTCTGAATGTGAGTTGATGCCTGAGCGCTATGCCTTTACTTATGACT
TTGAGCATAAAAAGTTGAGCTTATTTATTAATGCTGACTTGATTGATAGCCAAAAAACGACTCGCCAGTTTCACGAGGCA
ACTAATCAGCAATACGGTGTGATTAATAGTGTTAATTTGAACTATCACTACTTTGGTGATGGCGGAGCGTCGCTTATAGG
CCGTGATGAAACCTTGATAGGCTTAAAGTATGGCTCGATAAAATCGAGTCTTTATGCCGATACTGCGGCGAATAAATTTG
AAGCCGAGCAGCTATCTTATGACTTTGAAAGTCAAAATCGACGCTTTCAATTTGGCCACTTTAAGTATGGCTATGAGCAA
AATACCACAGCGTTTATGGATCTATCCGGTAGTTATTCTCAGGATATTATCAATTACTCGTCCTCGCAAAACTTGATCGA
TGGTGGTAAGCAAAATAATCGCCGCTTGTTTTACATCTTGCCCAATAAGGGACGAATAGAGGTCTATCGAGATGGACACT
TAATCTATAGCAAGAATGTGGATGCCGGGCAGCAAAGTATCGCATTTCGTGATCTTCCCTATGGTTCATACACGGCCTCG
ATAGTGGTGATCTCTGCCGGGCGAGAGATCTTAAAGGAGCGCCAGCAGATTGTTAATAACAGCGCTTTCTCGCTGAATAA
AGGTGAATATGACTACAGTTTCTCTGCGGGGCGATTCAACGATAGATACGATAATAGTTATGACGGCGGCGTAGAGCAAA
GTCAGCTAACTAAGATACAAGCTAAGTTAGGTTATTTAGTTGGCCCAGACAGTTTTATACAGGCCGATGGCTTTATTCAT
GATGGCGATTACTCCTATAAACGCACTGGCGGGCTTAATGCCTACCTTAAAACGCTAACGGAGCCTTATTCGCTGCAACT
CGAAAGTAATAACTTTGTTGAAGGTAAGCTTTCATATCAGTTAACAGATAGCACCATGATAGGTGGGCGAATTTTGTCAA
ACTCAGACAGTACCTTGTCTGAGCTAGGCGTTAAGACATCATTGAGTGATGACTCTACTGCGCAGTTGAAATTCGCTTCG
TTTTCAAATGGTAGCCAATTTATTGCAGCAGATGTGAGCTTTTACAATATCGGTGTTGGCTATGAGAAGTTTGATTCAGC
CGACAGCGATTTTGGTTTAGATAACTTCATGTTGTCCAATACTGGTTACCAGCGCCTTAATGTGAACCTTTCTTCTGATC
TTTGGGGCGGACAGGGCTATGTGCTTTATGTGAATAATAAGCTCGATGCTGAAAACGAGGCGCAACCGTTTCTTGATCAA
AGTGATTATTGGTCGGTGAGTGCAGGTTTTTCACATTCGTTTGTAGCGGATTCAGTGATTAACTTTTCGGCGACATTTCA
AGGCGGCGAAAGCTTTGGTGTTAAAGACGACTGGTATGCCAGCGTGCTGTGGTCTGTGCCTTTGTCTGCTGGATGGAGTG
CAAGCTCATCGGTATCGGTGAGTCGACAAGGGCTCGATGAATTTAGAAACAGTGTGGCTAATGACAGGCAATTGAGTCGT
AACTTGTCGATGAATAACGAGCTCGGGATCAGCTATAACGGCACCGATATCGAGCGCAATATGAGTAGCGATCTATCCAG
TAATATTAATTACAACAATGGCTATGTGGCGTCAGATACCTATGCCTATATCAGCTCAGATGGCACCCACTCTGTAAGCT
CAAGTTTTAATAGCACTCAGGTGTTATCGGGGAAAGGAGAAGTCTATTTTAGCTCAGAGCAAAGTGACGCTTACATCATT
GTTGATGCGCAGAATCAGGGAAGCGATGACGCTCACCGTGGGCTGCTTTCTATTTATGATGATAACACGCTGAGCTATAG
CGAAAATATTGATCGAGAAGAGACGATTATTCCAGTCAATAAATATAAGGCATTCAATGCGCGTTTAGACACGGATTCAT
CAAATTATATTAGCGATCAAACGCGAGAAGTCTCCGGTTATAGCCTGCCTGGTACCGTGATCTCACTGGATCTCGACTTA
GTTAAAGTGAAAACCTTTATCTCTTCTTTTGATGATGTGAATCATCAAGTCATTGCTGACGTTGAGTGTACAGGAGAGGG
CTGTATTGATGTCGAACAGGTTGAAGAGGGCGTGTTTAAGATTTCTGTGATTGCGGGCTCTGATTACCAGTTGGTATCAG
AAAACCAAACTTGTGTGACACCGACCCTAGATAGAGACTCGACTCACATCGTTAATACAGGCAATAACTATTGCCTACCG
GGTTTAGACAATGATGACACATTAATGCTGGCACAAGATAAGTCGCTGCAAGCGGTCACTATTGATGGCAATGAGTATTA
CTTTATTGGTGTTTTTACCAATGAAGATGAACGGGTGAATACAAACCGCAAACTTGAAGAAGTGGGTTTGGCAGTCATCA
CTCGCATCGTCGGTCAGCGGCAATATCTTTACGTGACTAATGAGTCAAGTCTTAGCGCTAGCCAAGTATCGCTGTTAAAC
GAATTAAGCCTTTATGCAAAGAGTCTGATTGAAGATGACAGCTTTGCTCACAACTGGAATTAA

Upstream 100 bases:

>100_bases
GTAAATACAGTCACTTTGACGTTGAGCTTAAGTTTGCACCTGTCAGTTTAAAAGATGACTACTGCGAAGGGATGATCAAG
ATGAGTATAGAGCTAGCAAT

Downstream 100 bases:

>100_bases
ATTATGAAGATGACGAAACCTTTATTATTGATCATATTATCTCTGTTTGTTTTCGATGCATCAGCGATGGCGATCAGTAG
TTTAATGCTAACAAATCCAG

Product: P pilus assembly protein porin PapC-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 980; Mature: 980

Protein sequence:

>980_residues
MRYNKIALSILFGLSCTLTPQLSLPVYASVKSEGIAIPDEFAELYSGSTEAFDFQLASAKEQLVIKLNSTPTSASLNRES
KVSVEQYLTRLNVKREAVADIITAMKNITTSSLCLGKVSECELMPERYAFTYDFEHKKLSLFINADLIDSQKTTRQFHEA
TNQQYGVINSVNLNYHYFGDGGASLIGRDETLIGLKYGSIKSSLYADTAANKFEAEQLSYDFESQNRRFQFGHFKYGYEQ
NTTAFMDLSGSYSQDIINYSSSQNLIDGGKQNNRRLFYILPNKGRIEVYRDGHLIYSKNVDAGQQSIAFRDLPYGSYTAS
IVVISAGREILKERQQIVNNSAFSLNKGEYDYSFSAGRFNDRYDNSYDGGVEQSQLTKIQAKLGYLVGPDSFIQADGFIH
DGDYSYKRTGGLNAYLKTLTEPYSLQLESNNFVEGKLSYQLTDSTMIGGRILSNSDSTLSELGVKTSLSDDSTAQLKFAS
FSNGSQFIAADVSFYNIGVGYEKFDSADSDFGLDNFMLSNTGYQRLNVNLSSDLWGGQGYVLYVNNKLDAENEAQPFLDQ
SDYWSVSAGFSHSFVADSVINFSATFQGGESFGVKDDWYASVLWSVPLSAGWSASSSVSVSRQGLDEFRNSVANDRQLSR
NLSMNNELGISYNGTDIERNMSSDLSSNINYNNGYVASDTYAYISSDGTHSVSSSFNSTQVLSGKGEVYFSSEQSDAYII
VDAQNQGSDDAHRGLLSIYDDNTLSYSENIDREETIIPVNKYKAFNARLDTDSSNYISDQTREVSGYSLPGTVISLDLDL
VKVKTFISSFDDVNHQVIADVECTGEGCIDVEQVEEGVFKISVIAGSDYQLVSENQTCVTPTLDRDSTHIVNTGNNYCLP
GLDNDDTLMLAQDKSLQAVTIDGNEYYFIGVFTNEDERVNTNRKLEEVGLAVITRIVGQRQYLYVTNESSLSASQVSLLN
ELSLYAKSLIEDDSFAHNWN

Sequences:

>Translated_980_residues
MRYNKIALSILFGLSCTLTPQLSLPVYASVKSEGIAIPDEFAELYSGSTEAFDFQLASAKEQLVIKLNSTPTSASLNRES
KVSVEQYLTRLNVKREAVADIITAMKNITTSSLCLGKVSECELMPERYAFTYDFEHKKLSLFINADLIDSQKTTRQFHEA
TNQQYGVINSVNLNYHYFGDGGASLIGRDETLIGLKYGSIKSSLYADTAANKFEAEQLSYDFESQNRRFQFGHFKYGYEQ
NTTAFMDLSGSYSQDIINYSSSQNLIDGGKQNNRRLFYILPNKGRIEVYRDGHLIYSKNVDAGQQSIAFRDLPYGSYTAS
IVVISAGREILKERQQIVNNSAFSLNKGEYDYSFSAGRFNDRYDNSYDGGVEQSQLTKIQAKLGYLVGPDSFIQADGFIH
DGDYSYKRTGGLNAYLKTLTEPYSLQLESNNFVEGKLSYQLTDSTMIGGRILSNSDSTLSELGVKTSLSDDSTAQLKFAS
FSNGSQFIAADVSFYNIGVGYEKFDSADSDFGLDNFMLSNTGYQRLNVNLSSDLWGGQGYVLYVNNKLDAENEAQPFLDQ
SDYWSVSAGFSHSFVADSVINFSATFQGGESFGVKDDWYASVLWSVPLSAGWSASSSVSVSRQGLDEFRNSVANDRQLSR
NLSMNNELGISYNGTDIERNMSSDLSSNINYNNGYVASDTYAYISSDGTHSVSSSFNSTQVLSGKGEVYFSSEQSDAYII
VDAQNQGSDDAHRGLLSIYDDNTLSYSENIDREETIIPVNKYKAFNARLDTDSSNYISDQTREVSGYSLPGTVISLDLDL
VKVKTFISSFDDVNHQVIADVECTGEGCIDVEQVEEGVFKISVIAGSDYQLVSENQTCVTPTLDRDSTHIVNTGNNYCLP
GLDNDDTLMLAQDKSLQAVTIDGNEYYFIGVFTNEDERVNTNRKLEEVGLAVITRIVGQRQYLYVTNESSLSASQVSLLN
ELSLYAKSLIEDDSFAHNWN
>Mature_980_residues
MRYNKIALSILFGLSCTLTPQLSLPVYASVKSEGIAIPDEFAELYSGSTEAFDFQLASAKEQLVIKLNSTPTSASLNRES
KVSVEQYLTRLNVKREAVADIITAMKNITTSSLCLGKVSECELMPERYAFTYDFEHKKLSLFINADLIDSQKTTRQFHEA
TNQQYGVINSVNLNYHYFGDGGASLIGRDETLIGLKYGSIKSSLYADTAANKFEAEQLSYDFESQNRRFQFGHFKYGYEQ
NTTAFMDLSGSYSQDIINYSSSQNLIDGGKQNNRRLFYILPNKGRIEVYRDGHLIYSKNVDAGQQSIAFRDLPYGSYTAS
IVVISAGREILKERQQIVNNSAFSLNKGEYDYSFSAGRFNDRYDNSYDGGVEQSQLTKIQAKLGYLVGPDSFIQADGFIH
DGDYSYKRTGGLNAYLKTLTEPYSLQLESNNFVEGKLSYQLTDSTMIGGRILSNSDSTLSELGVKTSLSDDSTAQLKFAS
FSNGSQFIAADVSFYNIGVGYEKFDSADSDFGLDNFMLSNTGYQRLNVNLSSDLWGGQGYVLYVNNKLDAENEAQPFLDQ
SDYWSVSAGFSHSFVADSVINFSATFQGGESFGVKDDWYASVLWSVPLSAGWSASSSVSVSRQGLDEFRNSVANDRQLSR
NLSMNNELGISYNGTDIERNMSSDLSSNINYNNGYVASDTYAYISSDGTHSVSSSFNSTQVLSGKGEVYFSSEQSDAYII
VDAQNQGSDDAHRGLLSIYDDNTLSYSENIDREETIIPVNKYKAFNARLDTDSSNYISDQTREVSGYSLPGTVISLDLDL
VKVKTFISSFDDVNHQVIADVECTGEGCIDVEQVEEGVFKISVIAGSDYQLVSENQTCVTPTLDRDSTHIVNTGNNYCLP
GLDNDDTLMLAQDKSLQAVTIDGNEYYFIGVFTNEDERVNTNRKLEEVGLAVITRIVGQRQYLYVTNESSLSASQVSLLN
ELSLYAKSLIEDDSFAHNWN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 108718; Mature: 108718

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYNKIALSILFGLSCTLTPQLSLPVYASVKSEGIAIPDEFAELYSGSTEAFDFQLASAK
CCCHHEEEEEECCCEEEECCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCEEEEEEECCC
EQLVIKLNSTPTSASLNRESKVSVEQYLTRLNVKREAVADIITAMKNITTSSLCLGKVSE
EEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHCCCCCHH
CELMPERYAFTYDFEHKKLSLFINADLIDSQKTTRQFHEATNQQYGVINSVNLNYHYFGD
HHCCCCCEEEEEEECCCEEEEEEECCEECCHHHHHHHHHHCCCCCCEEEEEEEEEEEECC
GGASLIGRDETLIGLKYGSIKSSLYADTAANKFEAEQLSYDFESQNRRFQFGHFKYGYEQ
CCCEEECCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHCCCCCCCCCEEEECCEEECCCC
NTTAFMDLSGSYSQDIINYSSSQNLIDGGKQNNRRLFYILPNKGRIEVYRDGHLIYSKNV
CCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCEEEEECCC
DAGQQSIAFRDLPYGSYTASIVVISAGREILKERQQIVNNSAFSLNKGEYDYSFSAGRFN
CCCCCCEEEEECCCCCEEEEEEEEECCHHHHHHHHHHHCCCCEEECCCCCCEEECCCCCC
DRYDNSYDGGVEQSQLTKIQAKLGYLVGPDSFIQADGFIHDGDYSYKRTGGLNAYLKTLT
CCCCCCCCCCCCHHHHHHHHHHHCEEECCCHHEECCCEEECCCCCEEECCCHHHHHHHCC
EPYSLQLESNNFVEGKLSYQLTDSTMIGGRILSNSDSTLSELGVKTSLSDDSTAQLKFAS
CCEEEEECCCCEEEEEEEEEEECCEEECCEEECCCCCHHHHCCCEECCCCCCCEEEEEEE
FSNGSQFIAADVSFYNIGVGYEKFDSADSDFGLDNFMLSNTGYQRLNVNLSSDLWGGQGY
CCCCCEEEEEEEEEEEECCCHHHCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCEE
VLYVNNKLDAENEAQPFLDQSDYWSVSAGFSHSFVADSVINFSATFQGGESFGVKDDWYA
EEEECCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHEEEEEEECCCCCCCCCCCHHH
SVLWSVPLSAGWSASSSVSVSRQGLDEFRNSVANDRQLSRNLSMNNELGISYNGTDIERN
HEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEECCCCCCCH
MSSDLSSNINYNNGYVASDTYAYISSDGTHSVSSSFNSTQVLSGKGEVYFSSEQSDAYII
HHHHHHCCCCCCCCEEECCEEEEEECCCCCHHHCCCCCEEEECCCCCEEEECCCCCEEEE
VDAQNQGSDDAHRGLLSIYDDNTLSYSENIDREETIIPVNKYKAFNARLDTDSSNYISDQ
EECCCCCCCHHHCCEEEEECCCEEECCCCCCCCCEEEEEHHCEEEEEEECCCCCCCCCCC
TREVSGYSLPGTVISLDLDLVKVKTFISSFDDVNHQVIADVECTGEGCIDVEQVEEGVFK
CCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEHHHHCCCEEE
ISVIAGSDYQLVSENQTCVTPTLDRDSTHIVNTGNNYCLPGLDNDDTLMLAQDKSLQAVT
EEEEECCCEEEECCCCEEECCCCCCCCCEEEECCCCEECCCCCCCCEEEEEECCCEEEEE
IDGNEYYFIGVFTNEDERVNTNRKLEEVGLAVITRIVGQRQYLYVTNESSLSASQVSLLN
EECCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHH
ELSLYAKSLIEDDSFAHNWN
HHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRYNKIALSILFGLSCTLTPQLSLPVYASVKSEGIAIPDEFAELYSGSTEAFDFQLASAK
CCCHHEEEEEECCCEEEECCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCEEEEEEECCC
EQLVIKLNSTPTSASLNRESKVSVEQYLTRLNVKREAVADIITAMKNITTSSLCLGKVSE
EEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHCCCCCHH
CELMPERYAFTYDFEHKKLSLFINADLIDSQKTTRQFHEATNQQYGVINSVNLNYHYFGD
HHCCCCCEEEEEEECCCEEEEEEECCEECCHHHHHHHHHHCCCCCCEEEEEEEEEEEECC
GGASLIGRDETLIGLKYGSIKSSLYADTAANKFEAEQLSYDFESQNRRFQFGHFKYGYEQ
CCCEEECCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHCCCCCCCCCEEEECCEEECCCC
NTTAFMDLSGSYSQDIINYSSSQNLIDGGKQNNRRLFYILPNKGRIEVYRDGHLIYSKNV
CCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCEEEEECCC
DAGQQSIAFRDLPYGSYTASIVVISAGREILKERQQIVNNSAFSLNKGEYDYSFSAGRFN
CCCCCCEEEEECCCCCEEEEEEEEECCHHHHHHHHHHHCCCCEEECCCCCCEEECCCCCC
DRYDNSYDGGVEQSQLTKIQAKLGYLVGPDSFIQADGFIHDGDYSYKRTGGLNAYLKTLT
CCCCCCCCCCCCHHHHHHHHHHHCEEECCCHHEECCCEEECCCCCEEECCCHHHHHHHCC
EPYSLQLESNNFVEGKLSYQLTDSTMIGGRILSNSDSTLSELGVKTSLSDDSTAQLKFAS
CCEEEEECCCCEEEEEEEEEEECCEEECCEEECCCCCHHHHCCCEECCCCCCCEEEEEEE
FSNGSQFIAADVSFYNIGVGYEKFDSADSDFGLDNFMLSNTGYQRLNVNLSSDLWGGQGY
CCCCCEEEEEEEEEEEECCCHHHCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCEE
VLYVNNKLDAENEAQPFLDQSDYWSVSAGFSHSFVADSVINFSATFQGGESFGVKDDWYA
EEEECCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHEEEEEEECCCCCCCCCCCHHH
SVLWSVPLSAGWSASSSVSVSRQGLDEFRNSVANDRQLSRNLSMNNELGISYNGTDIERN
HEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEECCCCCCCH
MSSDLSSNINYNNGYVASDTYAYISSDGTHSVSSSFNSTQVLSGKGEVYFSSEQSDAYII
HHHHHHCCCCCCCCEEECCEEEEEECCCCCHHHCCCCCEEEECCCCCEEEECCCCCEEEE
VDAQNQGSDDAHRGLLSIYDDNTLSYSENIDREETIIPVNKYKAFNARLDTDSSNYISDQ
EECCCCCCCHHHCCEEEEECCCEEECCCCCCCCCEEEEEHHCEEEEEEECCCCCCCCCCC
TREVSGYSLPGTVISLDLDLVKVKTFISSFDDVNHQVIADVECTGEGCIDVEQVEEGVFK
CCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEHHHHCCCEEE
ISVIAGSDYQLVSENQTCVTPTLDRDSTHIVNTGNNYCLPGLDNDDTLMLAQDKSLQAVT
EEEEECCCEEEECCCCEEECCCCCCCCCEEEECCCCEECCCCCCCCEEEEEECCCEEEEE
IDGNEYYFIGVFTNEDERVNTNRKLEEVGLAVITRIVGQRQYLYVTNESSLSASQVSLLN
EECCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHH
ELSLYAKSLIEDDSFAHNWN
HHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA