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The map label for this gene is ompA [H]

Identifier: 167624709

GI number: 167624709

Start: 3394896

End: 3395861

Strand: Reverse

Name: ompA [H]

Synonym: Shal_2791

Alternate gene names: 167624709

Gene position: 3395861-3394896 (Counterclockwise)

Preceding gene: 167624710

Following gene: 167624695

Centisome position: 64.97

GC content: 44.41

Gene sequence:

>966_bases
ATGGGAATGAGCCCGATAAAGTTTATCTGTTTTGTCAGTATATTCTTGCTCTGCCAGGATGCTGTGGCAGCTAAAAGTTT
TTATAGTGATGGTGATTTTTATTTTGGTGGCAAGCTGGGTGGCGTATTACTGGACAGTGAAGAGCCGCTAGAGCCGGGGG
AGAACAAAATGGTTAACCTTAGCTCGGGTTTGACCCTAGGATATAACATCAACTCTTATTTATCGGTAGAAACGGATATG
AGTTATCTAGGCCAGTATCAAGATGAGCTATCTGGAGAAGATAAAAACTTATTTGCAATCGGGGCTTCTTTGTCGACTCG
ATATCGACTCAGTGATGATGCCGCGCTGTATGTTAAATTAGGTCCAGCCTGGGTTGAAGATAACGTGTCGCTTAGTAGTG
GTTTAGGTATCAAGTATCGACTATCACCCAACTGGGAGCTTGATAGCGGATATCGCTGGATTAAAGATACCCCAAGCACT
GATGATGACTTGTATGAGTTTACGCTAGGGATTAACTATAAGTTTGGTGTTGTCTCACATCAGCCTGTACGCCCAGCGGT
AGAGCCAACGCTTAAACATAAAAAGAAAGTTGAACTCCTTGACGCAACATCGACAACCGCCATTACGGTATCGAAACCCG
TATCAATCAGTGCTAAAAGTTTATTTGGATTTGATAGTAGTAAGCTTGTTGCCACTGAAGCTTTAGCTGAGGTGCTAAAA
AATGTAATAGCGAGTAAGGATACTGAGATCTGTATTACCGCCTACACTGACAGCTTAGGCGCGAAGGAGTATAACTTAAC
GCTATCGAAACAACGCGCCGAAGCGACTCGAAGCTATTTTATCTCCAACGGCGTAGAGCCAAGCCGTATCCATGTCGATT
GGAAAGGGGAGGCGAGCCCCGTAGCTACAAACAGAACCGCTGAGGGGCGAGCGTTAAATCGTAGAGTCAAAATCGAGCTC
AATTAA

Upstream 100 bases:

>100_bases
ATGTCTCAGTGAATGACGTAGAAGAGAAACGTTATAACGACAATTTTACCCTGATGTTTGAGGTGCAGTTGTGAAGATAA
CTCTGAATAAATGGAGTTCG

Downstream 100 bases:

>100_bases
TGCCCTTGGTACTATATAGTGCTGGTATTAACAGCCAGAGGATCACTGTTTACGGCTAAAATCTTTTGATTAAGCGTCCT
GCAACTAACAGTCACTGTGT

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MGMSPIKFICFVSIFLLCQDAVAAKSFYSDGDFYFGGKLGGVLLDSEEPLEPGENKMVNLSSGLTLGYNINSYLSVETDM
SYLGQYQDELSGEDKNLFAIGASLSTRYRLSDDAALYVKLGPAWVEDNVSLSSGLGIKYRLSPNWELDSGYRWIKDTPST
DDDLYEFTLGINYKFGVVSHQPVRPAVEPTLKHKKKVELLDATSTTAITVSKPVSISAKSLFGFDSSKLVATEALAEVLK
NVIASKDTEICITAYTDSLGAKEYNLTLSKQRAEATRSYFISNGVEPSRIHVDWKGEASPVATNRTAEGRALNRRVKIEL
N

Sequences:

>Translated_321_residues
MGMSPIKFICFVSIFLLCQDAVAAKSFYSDGDFYFGGKLGGVLLDSEEPLEPGENKMVNLSSGLTLGYNINSYLSVETDM
SYLGQYQDELSGEDKNLFAIGASLSTRYRLSDDAALYVKLGPAWVEDNVSLSSGLGIKYRLSPNWELDSGYRWIKDTPST
DDDLYEFTLGINYKFGVVSHQPVRPAVEPTLKHKKKVELLDATSTTAITVSKPVSISAKSLFGFDSSKLVATEALAEVLK
NVIASKDTEICITAYTDSLGAKEYNLTLSKQRAEATRSYFISNGVEPSRIHVDWKGEASPVATNRTAEGRALNRRVKIEL
N
>Mature_320_residues
GMSPIKFICFVSIFLLCQDAVAAKSFYSDGDFYFGGKLGGVLLDSEEPLEPGENKMVNLSSGLTLGYNINSYLSVETDMS
YLGQYQDELSGEDKNLFAIGASLSTRYRLSDDAALYVKLGPAWVEDNVSLSSGLGIKYRLSPNWELDSGYRWIKDTPSTD
DDLYEFTLGINYKFGVVSHQPVRPAVEPTLKHKKKVELLDATSTTAITVSKPVSISAKSLFGFDSSKLVATEALAEVLKN
VIASKDTEICITAYTDSLGAKEYNLTLSKQRAEATRSYFISNGVEPSRIHVDWKGEASPVATNRTAEGRALNRRVKIELN

Specific function: Required for the action of colicins K and L and for the stabilization of mating aggregates in conjugation. Serves as a receptor for a number of T-even like phages. Also acts as a porin with low permeability that allows slow penetration of small solutes [H

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=335, Percent_Identity=25.9701492537313, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI48994946, Length=134, Percent_Identity=35.8208955223881, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR006664
- InterPro:   IPR002368
- InterPro:   IPR006690
- InterPro:   IPR000498
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA; PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 35272; Mature: 35141

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMSPIKFICFVSIFLLCQDAVAAKSFYSDGDFYFGGKLGGVLLDSEEPLEPGENKMVNL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCEECCEEECCCCCCCCCCCCEEEE
SSGLTLGYNINSYLSVETDMSYLGQYQDELSGEDKNLFAIGASLSTRYRLSDDAALYVKL
CCCEEEEEECCCEEEEECCHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCEEEEEE
GPAWVEDNVSLSSGLGIKYRLSPNWELDSGYRWIKDTPSTDDDLYEFTLGINYKFGVVSH
CCEEECCCCEECCCCCEEEEECCCCCCCCCEEEECCCCCCCCCEEEEEEECEEEEECCCC
QPVRPAVEPTLKHKKKVELLDATSTTAITVSKPVSISAKSLFGFDSSKLVATEALAEVLK
CCCCCCCCHHHHCCCEEEEEECCCCEEEEEECCCEEEHHHHCCCCCCCCHHHHHHHHHHH
NVIASKDTEICITAYTDSLGAKEYNLTLSKQRAEATRSYFISNGVEPSRIHVDWKGEASP
HHHCCCCCCEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
VATNRTAEGRALNRRVKIELN
CCCCCCCCCCEECEEEEEEEC
>Mature Secondary Structure 
GMSPIKFICFVSIFLLCQDAVAAKSFYSDGDFYFGGKLGGVLLDSEEPLEPGENKMVNL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCEECCEEECCCCCCCCCCCCEEEE
SSGLTLGYNINSYLSVETDMSYLGQYQDELSGEDKNLFAIGASLSTRYRLSDDAALYVKL
CCCEEEEEECCCEEEEECCHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCEEEEEE
GPAWVEDNVSLSSGLGIKYRLSPNWELDSGYRWIKDTPSTDDDLYEFTLGINYKFGVVSH
CCEEECCCCEECCCCCEEEEECCCCCCCCCEEEECCCCCCCCCEEEEEEECEEEEECCCC
QPVRPAVEPTLKHKKKVELLDATSTTAITVSKPVSISAKSLFGFDSSKLVATEALAEVLK
CCCCCCCCHHHHCCCEEEEEECCCCEEEEEECCCEEEHHHHCCCCCCCCHHHHHHHHHHH
NVIASKDTEICITAYTDSLGAKEYNLTLSKQRAEATRSYFISNGVEPSRIHVDWKGEASP
HHHCCCCCCEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
VATNRTAEGRALNRRVKIELN
CCCCCCCCCCEECEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]