| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
Click here to switch to the map view.
The map label for this gene is ynaD [H]
Identifier: 167624634
GI number: 167624634
Start: 3294992
End: 3295525
Strand: Reverse
Name: ynaD [H]
Synonym: Shal_2716
Alternate gene names: 167624634
Gene position: 3295525-3294992 (Counterclockwise)
Preceding gene: 167624635
Following gene: 167624633
Centisome position: 63.05
GC content: 43.07
Gene sequence:
>534_bases ATGCTCGAACTGTATACCGATAGACTCAGGTTAAGAACGGTTACTCCAGGAGACTGGGATAACTTTCTATATACTCATTC AAGTGAACAACTAAATGAGTTTGTACGAAAGCCTCAGATTGAATCGGAGATACGACAAAAGTTCGAGCGTGTTTTAGAAA ATCGAGAGTTTTGTGAAGGCGAGTGGTTACTCACTATTATCGAGGATGCCCATACACATGACTTTATTGGTTTCATTGGG CTGCATAATAGCGATGCCGAAATGGCGCAAATGCAAGTTGGTTATATGATGCACCCAAGCGCTCATGGGCAAGGTTATGC CAGTGAGAGCTTAAAGGCGATTGTCGATTGGGCATGCCTATCCTACGCGCCCCACAAGTTTATAGCCTATTGTGTAGAGC AAAATATTGCTTCAACTAAGGTGCTGGAAAAGTGTGGTTTTAAGCGCGAAGGTTTGTTGCGAGAGAACTGTAAAATCGGC GAGCAATGGTTTAACGATTGCGTTTATGGACTCTTAGCAACAGAAAGAGTTTAG
Upstream 100 bases:
>100_bases CGAAGTTCAAGGTCCAGTTAAGACTCAGTTTGGTTACCATCTTCTTGAAGTAACAAGCAGAGGCTAATCGCCTTTAGCTT TGCTAAACAAGAGGGGAAAC
Downstream 100 bases:
>100_bases CAACACTAGAAAGCATGTATAGGCATCTCAATTGGGTGCTATAATGCTGTCAGTTTTGATTATTTAAGGCGAAATACCGT GAGTTCAGATACTCCAACGT
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MLELYTDRLRLRTVTPGDWDNFLYTHSSEQLNEFVRKPQIESEIRQKFERVLENREFCEGEWLLTIIEDAHTHDFIGFIG LHNSDAEMAQMQVGYMMHPSAHGQGYASESLKAIVDWACLSYAPHKFIAYCVEQNIASTKVLEKCGFKREGLLRENCKIG EQWFNDCVYGLLATERV
Sequences:
>Translated_177_residues MLELYTDRLRLRTVTPGDWDNFLYTHSSEQLNEFVRKPQIESEIRQKFERVLENREFCEGEWLLTIIEDAHTHDFIGFIG LHNSDAEMAQMQVGYMMHPSAHGQGYASESLKAIVDWACLSYAPHKFIAYCVEQNIASTKVLEKCGFKREGLLRENCKIG EQWFNDCVYGLLATERV >Mature_177_residues MLELYTDRLRLRTVTPGDWDNFLYTHSSEQLNEFVRKPQIESEIRQKFERVLENREFCEGEWLLTIIEDAHTHDFIGFIG LHNSDAEMAQMQVGYMMHPSAHGQGYASESLKAIVDWACLSYAPHKFIAYCVEQNIASTKVLEKCGFKREGLLRENCKIG EQWFNDCVYGLLATERV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 20588; Mature: 20588
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELYTDRLRLRTVTPGDWDNFLYTHSSEQLNEFVRKPQIESEIRQKFERVLENREFCEG CCCCCCCCEEEEECCCCCCCCCEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC EWLLTIIEDAHTHDFIGFIGLHNSDAEMAQMQVGYMMHPSAHGQGYASESLKAIVDWACL CEEEEEECCCCCCHHEEEEECCCCCHHHHHHHHCEEECCCCCCCCCHHHHHHHHHHHHHH SYAPHKFIAYCVEQNIASTKVLEKCGFKREGLLRENCKIGEQWFNDCVYGLLATERV HHCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLELYTDRLRLRTVTPGDWDNFLYTHSSEQLNEFVRKPQIESEIRQKFERVLENREFCEG CCCCCCCCEEEEECCCCCCCCCEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC EWLLTIIEDAHTHDFIGFIGLHNSDAEMAQMQVGYMMHPSAHGQGYASESLKAIVDWACL CEEEEEECCCCCCHHEEEEECCCCCHHHHHHHHCEEECCCCCCCCCHHHHHHHHHHHHHH SYAPHKFIAYCVEQNIASTKVLEKCGFKREGLLRENCKIGEQWFNDCVYGLLATERV HHCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]