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The map label for this gene is tsgA [H]

Identifier: 167624624

GI number: 167624624

Start: 3283908

End: 3285086

Strand: Reverse

Name: tsgA [H]

Synonym: Shal_2706

Alternate gene names: 167624624

Gene position: 3285086-3283908 (Counterclockwise)

Preceding gene: 167624625

Following gene: 167624622

Centisome position: 62.85

GC content: 38.17

Gene sequence:

>1179_bases
ATGACCGAGCGCAATCGCATCCTACTCACATGGATAAGCTTTTTATCCTATGCATTAACGGGATCTTTGATTATTGTCAC
TGGGATTGTGATGGGGGATATTGCTAAATTTTTCAATTTACCTATCTCCAGCATGAGTAACACTTTTACATTCTTGAATA
CTGGCGTATTAATTTCTATTTTCTTTAATGTGTGGTTAATGGAAATCATTTCACTGAAAAAGCAGCTTATTTTTGGTTTT
ATTCTGATGCTACTGGCGGTTTTAGGGTTAATGTTTGGTCATAACCTTGCAATCTTCTCTGGTAGCATGTTTGTTCTTGG
TGTGGTGAGTGGTATTACCATGTCAATTGGTACTTATTTAATTACTCGCCTCTACCATGGTAAACAACGTGGTTCACGAT
TACTGTTTACCGATTCATTTTTCAGTATGGCAGGTATGATTTTCCCGCTAATTTCGGCTGCATTACTCGCACACAGTATT
GCTTGGTATTGGGTATACGTTGCCATTGGCATGATTTACGTTGCTATCTTTATACTGGCACTTATTTGCGAATTCCCTGC
ACTGGTTAAGTCTGATGAACAACAAGCGGTAAAAGAGAAATGGAGCCTAGGTATTCTGTTTTTAGCGATTGCAGCACTTT
GTTATATTTTAGGGCAAATGGCTTTTATTTCATGGATCCCTGAATATGCAACTAAATCGTTGGGCATGAATTTAAGTGGT
GCAAGTCAATTACTAAGTTACTTCTGGGGCGCATACATGCTTGGTATGTGGGGCTTTAGTATATTAATGAAGCGATTTGA
TATTCAATATTTTGTATTGGTGCTTTCTGCTTTAGCCACTGGATTAATGTTCTGGTTCAATATGGATACAGATACTGAGC
ATTTACTTATTATCATCTCAGTATTAGGTTTCTTCAGTAGTGCTATTTATACGACCATCATTACACTGGCGTCACAGCAG
ACAAAAGAAGCATCGCCTCGCATTGTAAATTTTATTTTATTCTGTGGCAGTATTGGCACTATGTTGACTTTCGTTGTTAC
CAGTCCAATTGTGAAGAGTTATGGTGCGCATGCAGCAATGCTGACCGGTAATGGTTTATATGCGGTCGTATTTATTATGT
GCTTATTAGTCGGCTTTGTAACAAAGCATCGTATTCACGGCCATTCATCAAGCCATTAA

Upstream 100 bases:

>100_bases
TCATTTATGTATCAAGTTGTATCATGTTAAAATAGGCCAGCTTAAATCGACTTTTAGAGGTCGATTTTTTTTATCCAATT
TTTACGATACAGGACTTGTT

Downstream 100 bases:

>100_bases
TTAATTAGATAAGTGAGTAAGCCCCCTCTTTTGAGGGGGCTTTTTTATGTATTTTTTATAATACTAAGCCGAAGAACTTA
ACATTGACGCGTGAGCGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MTERNRILLTWISFLSYALTGSLIIVTGIVMGDIAKFFNLPISSMSNTFTFLNTGVLISIFFNVWLMEIISLKKQLIFGF
ILMLLAVLGLMFGHNLAIFSGSMFVLGVVSGITMSIGTYLITRLYHGKQRGSRLLFTDSFFSMAGMIFPLISAALLAHSI
AWYWVYVAIGMIYVAIFILALICEFPALVKSDEQQAVKEKWSLGILFLAIAALCYILGQMAFISWIPEYATKSLGMNLSG
ASQLLSYFWGAYMLGMWGFSILMKRFDIQYFVLVLSALATGLMFWFNMDTDTEHLLIIISVLGFFSSAIYTTIITLASQQ
TKEASPRIVNFILFCGSIGTMLTFVVTSPIVKSYGAHAAMLTGNGLYAVVFIMCLLVGFVTKHRIHGHSSSH

Sequences:

>Translated_392_residues
MTERNRILLTWISFLSYALTGSLIIVTGIVMGDIAKFFNLPISSMSNTFTFLNTGVLISIFFNVWLMEIISLKKQLIFGF
ILMLLAVLGLMFGHNLAIFSGSMFVLGVVSGITMSIGTYLITRLYHGKQRGSRLLFTDSFFSMAGMIFPLISAALLAHSI
AWYWVYVAIGMIYVAIFILALICEFPALVKSDEQQAVKEKWSLGILFLAIAALCYILGQMAFISWIPEYATKSLGMNLSG
ASQLLSYFWGAYMLGMWGFSILMKRFDIQYFVLVLSALATGLMFWFNMDTDTEHLLIIISVLGFFSSAIYTTIITLASQQ
TKEASPRIVNFILFCGSIGTMLTFVVTSPIVKSYGAHAAMLTGNGLYAVVFIMCLLVGFVTKHRIHGHSSSH
>Mature_391_residues
TERNRILLTWISFLSYALTGSLIIVTGIVMGDIAKFFNLPISSMSNTFTFLNTGVLISIFFNVWLMEIISLKKQLIFGFI
LMLLAVLGLMFGHNLAIFSGSMFVLGVVSGITMSIGTYLITRLYHGKQRGSRLLFTDSFFSMAGMIFPLISAALLAHSIA
WYWVYVAIGMIYVAIFILALICEFPALVKSDEQQAVKEKWSLGILFLAIAALCYILGQMAFISWIPEYATKSLGMNLSGA
SQLLSYFWGAYMLGMWGFSILMKRFDIQYFVLVLSALATGLMFWFNMDTDTEHLLIIISVLGFFSSAIYTTIITLASQQT
KEASPRIVNFILFCGSIGTMLTFVVTSPIVKSYGAHAAMLTGNGLYAVVFIMCLLVGFVTKHRIHGHSSSH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TsgA family [H]

Homologues:

Organism=Escherichia coli, GI1789764, Length=395, Percent_Identity=67.0886075949367, Blast_Score=531, Evalue=1e-152,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43531; Mature: 43400

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTERNRILLTWISFLSYALTGSLIIVTGIVMGDIAKFFNLPISSMSNTFTFLNTGVLISI
CCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHH
FFNVWLMEIISLKKQLIFGFILMLLAVLGLMFGHNLAIFSGSMFVLGVVSGITMSIGTYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHH
ITRLYHGKQRGSRLLFTDSFFSMAGMIFPLISAALLAHSIAWYWVYVAIGMIYVAIFILA
HHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LICEFPALVKSDEQQAVKEKWSLGILFLAIAALCYILGQMAFISWIPEYATKSLGMNLSG
HHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ASQLLSYFWGAYMLGMWGFSILMKRFDIQYFVLVLSALATGLMFWFNMDTDTEHLLIIIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VLGFFSSAIYTTIITLASQQTKEASPRIVNFILFCGSIGTMLTFVVTSPIVKSYGAHAAM
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LTGNGLYAVVFIMCLLVGFVTKHRIHGHSSSH
EECCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TERNRILLTWISFLSYALTGSLIIVTGIVMGDIAKFFNLPISSMSNTFTFLNTGVLISI
CCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHH
FFNVWLMEIISLKKQLIFGFILMLLAVLGLMFGHNLAIFSGSMFVLGVVSGITMSIGTYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHH
ITRLYHGKQRGSRLLFTDSFFSMAGMIFPLISAALLAHSIAWYWVYVAIGMIYVAIFILA
HHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LICEFPALVKSDEQQAVKEKWSLGILFLAIAALCYILGQMAFISWIPEYATKSLGMNLSG
HHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ASQLLSYFWGAYMLGMWGFSILMKRFDIQYFVLVLSALATGLMFWFNMDTDTEHLLIIIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VLGFFSSAIYTTIITLASQQTKEASPRIVNFILFCGSIGTMLTFVVTSPIVKSYGAHAAM
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LTGNGLYAVVFIMCLLVGFVTKHRIHGHSSSH
EECCCHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA