| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
Click here to switch to the map view.
The map label for this gene is sixA [H]
Identifier: 167624582
GI number: 167624582
Start: 3228057
End: 3228527
Strand: Reverse
Name: sixA [H]
Synonym: Shal_2663
Alternate gene names: 167624582
Gene position: 3228527-3228057 (Counterclockwise)
Preceding gene: 167624587
Following gene: 167624580
Centisome position: 61.77
GC content: 47.77
Gene sequence:
>471_bases ATGCAGCTATTTTTAATGCGTCACGGAGAAGCGGGCTATAATGCTCATTCTGATAGGGAACGCACACTCACGGACATGGG GCGTCATCACACTGGGCTGATGAGTAATTGGTTAGGGCTTACTATCAAAGAGTTCGATTTGGTATTGGTTAGCCCGTATT TAAGAGCGCAGCAAAGCTGGCAAGAAGTCAGAAAGCACTTTCCAGAGCCTCATAAATGGATCACTTTAGATGAATTAGTA CCTTCGGGAGATCCTGAGCAGGTTGCTCATCTTGTGCTCGCCTATGCGGAGCAATACGCTGCTAACAATGTATTAGTCGT CGCACATATGCCGCTATTAGGCTATTTGGTCAGTGAACTGGTTCCTGGCGTCGAGCCGCCGTTGTTTGCCACATCGGGAG TCACCTTGATTGATAGGCAAAATGGCACAAACCACTTGGTTTGGCAGCATGCGCCACACTCAATTAGCTAA
Upstream 100 bases:
>100_bases TCTATTCGACTAATTAATAACTAAATAACGGTATGTTGGCGCATAGATTCGGACTACAATTACTAAAATAAGAATAAAGA ATTGGGAGTAGCCAAGCAGT
Downstream 100 bases:
>100_bases TTCGAACAGAACCCGTCGAGCACAATAAAAAGTGAGTCATTCTCGTGTATGTAGAAGACTCACTTTTTATTGTCTCATGT TTATTAATTTGTACATCAGC
Product: phosphohistidine phosphatase SixA
Products: NA
Alternate protein names: RX6 [H]
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MQLFLMRHGEAGYNAHSDRERTLTDMGRHHTGLMSNWLGLTIKEFDLVLVSPYLRAQQSWQEVRKHFPEPHKWITLDELV PSGDPEQVAHLVLAYAEQYAANNVLVVAHMPLLGYLVSELVPGVEPPLFATSGVTLIDRQNGTNHLVWQHAPHSIS
Sequences:
>Translated_156_residues MQLFLMRHGEAGYNAHSDRERTLTDMGRHHTGLMSNWLGLTIKEFDLVLVSPYLRAQQSWQEVRKHFPEPHKWITLDELV PSGDPEQVAHLVLAYAEQYAANNVLVVAHMPLLGYLVSELVPGVEPPLFATSGVTLIDRQNGTNHLVWQHAPHSIS >Mature_156_residues MQLFLMRHGEAGYNAHSDRERTLTDMGRHHTGLMSNWLGLTIKEFDLVLVSPYLRAQQSWQEVRKHFPEPHKWITLDELV PSGDPEQVAHLVLAYAEQYAANNVLVVAHMPLLGYLVSELVPGVEPPLFATSGVTLIDRQNGTNHLVWQHAPHSIS
Specific function: Exhibits phosphohistidine phosphatase activity towards the HPt domain of the ArcB sensor involved in the multistep His- Asp phosphorelay [H]
COG id: COG2062
COG function: function code T; Phosphohistidine phosphatase SixA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sixA phosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1788681, Length=158, Percent_Identity=44.3037974683544, Blast_Score=124, Evalue=4e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR004449 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: 3.1.3.- [C]
Molecular weight: Translated: 17634; Mature: 17634
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLFLMRHGEAGYNAHSDRERTLTDMGRHHTGLMSNWLGLTIKEFDLVLVSPYLRAQQSW CEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHEEEECHHHHHHHHH QEVRKHFPEPHKWITLDELVPSGDPEQVAHLVLAYAEQYAANNVLVVAHMPLLGYLVSEL HHHHHHCCCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHH VPGVEPPLFATSGVTLIDRQNGTNHLVWQHAPHSIS CCCCCCCCEECCCEEEEECCCCCCEEEEECCCCCCC >Mature Secondary Structure MQLFLMRHGEAGYNAHSDRERTLTDMGRHHTGLMSNWLGLTIKEFDLVLVSPYLRAQQSW CEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHEEEECHHHHHHHHH QEVRKHFPEPHKWITLDELVPSGDPEQVAHLVLAYAEQYAANNVLVVAHMPLLGYLVSEL HHHHHHCCCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHH VPGVEPPLFATSGVTLIDRQNGTNHLVWQHAPHSIS CCCCCCCCEECCCEEEEECCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9489669; 9205837; 9278503 [H]