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The map label for this gene is rsbT [H]

Identifier: 167624571

GI number: 167624571

Start: 3216285

End: 3217289

Strand: Reverse

Name: rsbT [H]

Synonym: Shal_2652

Alternate gene names: 167624571

Gene position: 3217289-3216285 (Counterclockwise)

Preceding gene: 167624572

Following gene: 167624570

Centisome position: 61.55

GC content: 41.09

Gene sequence:

>1005_bases
ATGCGGCCTGATTATTTACAGAAAGATAACCTTTTTATATGTGAAATAATCGAGGAAGCAGATGTTTATTATATCGCTGG
CGTCAGCAAGGTAATAGCAGAACATCTCGGATTTTTGGCATATGAAAGTGGTTTGATTTTTATCGCGGTGTCTGAAATTG
CGATGAATGTTATACGCCACGCCGAACGCGGAATGGCGACCATCACACGTACTTCTAATAATAAAGGCCTTGAGATCCAT
ATCGATGATTATGGTCCAGGAATACAGAATTTAACGGATGCAATGTGCGACGGTTACAGTACGTACGGAAGTATGGGAAT
GGGATTTGGTGCAGCACGTCGCTCAGTTGATGAGTTGATTGTCCAAAAGAGTGACCCGTCAGGCACATCAATCACATTAA
GGAAGTATCTTCCCGTTCCTGATGATTTTGTGGATATTGGAGTCGTTTCCCTTCCTGCTGTCGATGCTAATTTAAATACT
AATGAGCACATGATTATAGAATATGAAGGTGACAAAGTACTCGTTGCACTTCTTAAGTGTGTAGAGCAAAGGCTAAAAAC
CTCAGTGATTACCGATATTTCCAAAGAGATCATCAAGGAAAATTGCAGACTACCGTTAGAACAGTTGATTGAAAAGTGCT
CGTGCACGCTTAAGGCAAGTGAGCATGCATGTCGTTTTGAACTGGCCCTGTTAAGGCTTGCTGGGGATACCGTTGAGTTT
GCAAGCCTTGGTAGCATAGGTATTCATGCGCACTCAATACCCCAAATCTGCTTTTCGATTCAAAAGGAAAACGACGATTT
AATCATGCTTGAAAAGATCAATGTGATGAGGTTTAGCAGGCCGATACCATTCTGTTTTATTCTCCACTCAGGTTTCCTCC
CTTATTTCCATTTTTCGTCAATAGACCAATGTTCTAATTCTTCTAAATCAATCGCAATGAGTATATTTGATCAATATGCC
GCCAGTCATGATGAGAGTGACACTGTGATAGTAATGAAAGGGTAG

Upstream 100 bases:

>100_bases
GTGTTTCAATCGGTGATGTCAGAGTGGAGCGGGATCTGAAATCTGCCTTGACCTTATCCTATAGGCTTTCAGGTTATAAA
CTGATAAAAAACGCTGAATA

Downstream 100 bases:

>100_bases
TAAAATGAACCATTCGACACAGCAGACAGTTGCTCTGAGACAATACCTTACAGGCATTATTGGTAATGCTCCGTTCGGGA
TCTTGACGATTTCCGAAGAG

Product: putative anti-sigma regulatory factor, serine/threonine protein kinase

Products: NA

Alternate protein names: Anti-sigma-B factor rsbT; Switch protein/serine kinase [H]

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MRPDYLQKDNLFICEIIEEADVYYIAGVSKVIAEHLGFLAYESGLIFIAVSEIAMNVIRHAERGMATITRTSNNKGLEIH
IDDYGPGIQNLTDAMCDGYSTYGSMGMGFGAARRSVDELIVQKSDPSGTSITLRKYLPVPDDFVDIGVVSLPAVDANLNT
NEHMIIEYEGDKVLVALLKCVEQRLKTSVITDISKEIIKENCRLPLEQLIEKCSCTLKASEHACRFELALLRLAGDTVEF
ASLGSIGIHAHSIPQICFSIQKENDDLIMLEKINVMRFSRPIPFCFILHSGFLPYFHFSSIDQCSNSSKSIAMSIFDQYA
ASHDESDTVIVMKG

Sequences:

>Translated_334_residues
MRPDYLQKDNLFICEIIEEADVYYIAGVSKVIAEHLGFLAYESGLIFIAVSEIAMNVIRHAERGMATITRTSNNKGLEIH
IDDYGPGIQNLTDAMCDGYSTYGSMGMGFGAARRSVDELIVQKSDPSGTSITLRKYLPVPDDFVDIGVVSLPAVDANLNT
NEHMIIEYEGDKVLVALLKCVEQRLKTSVITDISKEIIKENCRLPLEQLIEKCSCTLKASEHACRFELALLRLAGDTVEF
ASLGSIGIHAHSIPQICFSIQKENDDLIMLEKINVMRFSRPIPFCFILHSGFLPYFHFSSIDQCSNSSKSIAMSIFDQYA
ASHDESDTVIVMKG
>Mature_334_residues
MRPDYLQKDNLFICEIIEEADVYYIAGVSKVIAEHLGFLAYESGLIFIAVSEIAMNVIRHAERGMATITRTSNNKGLEIH
IDDYGPGIQNLTDAMCDGYSTYGSMGMGFGAARRSVDELIVQKSDPSGTSITLRKYLPVPDDFVDIGVVSLPAVDANLNT
NEHMIIEYEGDKVLVALLKCVEQRLKTSVITDISKEIIKENCRLPLEQLIEKCSCTLKASEHACRFELALLRLAGDTVEF
ASLGSIGIHAHSIPQICFSIQKENDDLIMLEKINVMRFSRPIPFCFILHSGFLPYFHFSSIDQCSNSSKSIAMSIFDQYA
ASHDESDTVIVMKG

Specific function: Provides the crucial link between the upstream module (communication of environmental stress) and the downstream module (integration of the environmental signals with signals of energy stress) that compose the signal transduction pathway controlling the s

COG id: COG2172

COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594 [H]

Pfam domain/function: PF02518 HATPase_c [H]

EC number: =2.7.11.1 [H]

Molecular weight: Translated: 37081; Mature: 37081

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPDYLQKDNLFICEIIEEADVYYIAGVSKVIAEHLGFLAYESGLIFIAVSEIAMNVIRH
CCCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHEECCCEEEEEHHHHHHHHHHH
AERGMATITRTSNNKGLEIHIDDYGPGIQNLTDAMCDGYSTYGSMGMGFGAARRSVDELI
HHCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHH
VQKSDPSGTSITLRKYLPVPDDFVDIGVVSLPAVDANLNTNEHMIIEYEGDKVLVALLKC
EECCCCCCCEEEEEECCCCCCCHHHCCEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHH
VEQRLKTSVITDISKEIIKENCRLPLEQLIEKCSCTLKASEHACRFELALLRLAGDTVEF
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEECCCCHHHHHHHHHHHCCCCCHH
ASLGSIGIHAHSIPQICFSIQKENDDLIMLEKINVMRFSRPIPFCFILHSGFLPYFHFSS
HCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCEEEEECCCCCCCEECCC
IDQCSNSSKSIAMSIFDQYAASHDESDTVIVMKG
HHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEC
>Mature Secondary Structure
MRPDYLQKDNLFICEIIEEADVYYIAGVSKVIAEHLGFLAYESGLIFIAVSEIAMNVIRH
CCCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHEECCCEEEEEHHHHHHHHHHH
AERGMATITRTSNNKGLEIHIDDYGPGIQNLTDAMCDGYSTYGSMGMGFGAARRSVDELI
HHCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHH
VQKSDPSGTSITLRKYLPVPDDFVDIGVVSLPAVDANLNTNEHMIIEYEGDKVLVALLKC
EECCCCCCCEEEEEECCCCCCCHHHCCEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHH
VEQRLKTSVITDISKEIIKENCRLPLEQLIEKCSCTLKASEHACRFELALLRLAGDTVEF
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEECCCCHHHHHHHHHHHCCCCCHH
ASLGSIGIHAHSIPQICFSIQKENDDLIMLEKINVMRFSRPIPFCFILHSGFLPYFHFSS
HCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCEEEEECCCCCCCEECCC
IDQCSNSSKSIAMSIFDQYAASHDESDTVIVMKG
HHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8002610; 9384377; 8002609; 8824586; 9786195 [H]