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The map label for this gene is 167624567

Identifier: 167624567

GI number: 167624567

Start: 3211471

End: 3212637

Strand: Reverse

Name: 167624567

Synonym: Shal_2648

Alternate gene names: NA

Gene position: 3212637-3211471 (Counterclockwise)

Preceding gene: 167624570

Following gene: 167624566

Centisome position: 61.46

GC content: 47.81

Gene sequence:

>1167_bases
ATGTTAAACAGTGAAAACCCAAATCCACAATTGTCGAGTCAATATCAGAGTCTCGATACGCCTTTTTTGTTAGTCGATAA
ACCGCTCATGCTTAAAAACCTAGCGCGATTACGCAATAAGACCGAAGCTTTAGGAGCAGAGCTGCGGCCTCACTTTAAAA
CCGTAAGAGCACTCGAAGCGGTTAATCACCTACTGCCACAAAAAACATCGGCAATCACAGTCTCAACCGTAAAAGAAGCT
GAGGCGTTGGCAGGTGAGGGCTACACTAACATCGTTTATGCGGTTGGTATTTCTGAGGGCAAATTACCGAGAATCGAGCA
GCTTATCGTTAAGGGGGCTGAGGTAAGGGTACTACTCGACACCGTAGAACAAGCTGAGTTTGTGAGTCACTATTGTGAGC
AGCACAACTGCGCCATTCCAGCTCTGATAGAAGTTGACTGTGACGGGCATCGAGGCGGCATTCACCCTGATGATCCCAAG
TTAATTGAAATCGCCAATCTGCTGCACCAAGGCGCAGCGAGCTTCCATGGTGTGTTAGCCCATGCTGGTGAGTCTTATCT
TTGCTTCGATCAAGAGTCCTTAGCTGAAGCTGCCCGCAACGAAGTTCAAATGACCCTTAAGGCGGCTAATAACTTACGTG
CAGCAGCAATTCCTTGTGACATCGTTAGCATCGGCTCAACGCCTACTGCTCATAGCTATCAAGACCTGACAGGGATCACC
GAAGTTAGAGCGGGGGTTTATGGTTTCTTCGATTTAGTCATGACCGGAATAGGCGTGTGCCAGCTTGACGATATCGCAGC
CAGCGTGGTAACTACGGTGATTGGTCATAATAAGGAAAAGGGTTGGCTGTTTATTGATGCAGGATGGATGGCACTGTCGG
CTGATCGCGGCACCGCGAGTCAACCTAAAGATTGCGGTTATGGACTAGTCGCTAAATCCAATGGTCAGCTCGTTGAAGCA
ATGCAGGTGATTGGCGTTAATCAGGAGCATGGCATTATTGCTGCAGTTGGCAGTGATGGGATCAATTTTGATGATTTCCC
TGTTGGTTGTCGATTACATATTCTGCCTAATCATGCCTGCGCCACCGCCTCTATGCATCAACACTACCATGTGTTTGATA
CACAAGATAACACCTACGAGATCTGGAACCGAATTCAAGGCTGGTAA

Upstream 100 bases:

>100_bases
GTGCATCAAATCTAGCAATGACTTATTTGATTGTTCTGGTTAATAGCCCTGGTTAATAGCCCAGATTAATAGTTCAGATT
GATAGTTTAGGAAATCAAGC

Downstream 100 bases:

>100_bases
CATGCAATATTTAAATGAAGCGCAAACCGCAAAACTGATCACCCATCAACTGGCCTATACCGCCGTTAAAGAGGCGTTTA
TCGCAGCCATAACCGATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MLNSENPNPQLSSQYQSLDTPFLLVDKPLMLKNLARLRNKTEALGAELRPHFKTVRALEAVNHLLPQKTSAITVSTVKEA
EALAGEGYTNIVYAVGISEGKLPRIEQLIVKGAEVRVLLDTVEQAEFVSHYCEQHNCAIPALIEVDCDGHRGGIHPDDPK
LIEIANLLHQGAASFHGVLAHAGESYLCFDQESLAEAARNEVQMTLKAANNLRAAAIPCDIVSIGSTPTAHSYQDLTGIT
EVRAGVYGFFDLVMTGIGVCQLDDIAASVVTTVIGHNKEKGWLFIDAGWMALSADRGTASQPKDCGYGLVAKSNGQLVEA
MQVIGVNQEHGIIAAVGSDGINFDDFPVGCRLHILPNHACATASMHQHYHVFDTQDNTYEIWNRIQGW

Sequences:

>Translated_388_residues
MLNSENPNPQLSSQYQSLDTPFLLVDKPLMLKNLARLRNKTEALGAELRPHFKTVRALEAVNHLLPQKTSAITVSTVKEA
EALAGEGYTNIVYAVGISEGKLPRIEQLIVKGAEVRVLLDTVEQAEFVSHYCEQHNCAIPALIEVDCDGHRGGIHPDDPK
LIEIANLLHQGAASFHGVLAHAGESYLCFDQESLAEAARNEVQMTLKAANNLRAAAIPCDIVSIGSTPTAHSYQDLTGIT
EVRAGVYGFFDLVMTGIGVCQLDDIAASVVTTVIGHNKEKGWLFIDAGWMALSADRGTASQPKDCGYGLVAKSNGQLVEA
MQVIGVNQEHGIIAAVGSDGINFDDFPVGCRLHILPNHACATASMHQHYHVFDTQDNTYEIWNRIQGW
>Mature_388_residues
MLNSENPNPQLSSQYQSLDTPFLLVDKPLMLKNLARLRNKTEALGAELRPHFKTVRALEAVNHLLPQKTSAITVSTVKEA
EALAGEGYTNIVYAVGISEGKLPRIEQLIVKGAEVRVLLDTVEQAEFVSHYCEQHNCAIPALIEVDCDGHRGGIHPDDPK
LIEIANLLHQGAASFHGVLAHAGESYLCFDQESLAEAARNEVQMTLKAANNLRAAAIPCDIVSIGSTPTAHSYQDLTGIT
EVRAGVYGFFDLVMTGIGVCQLDDIAASVVTTVIGHNKEKGWLFIDAGWMALSADRGTASQPKDCGYGLVAKSNGQLVEA
MQVIGVNQEHGIIAAVGSDGINFDDFPVGCRLHILPNHACATASMHQHYHVFDTQDNTYEIWNRIQGW

Specific function: Catalyzes the reversible cleavage of D-theronine or D- allothreonine into glycine and acetaldehyde. Can also cleave D- beta-phenylserine, D-beta-hydroxy-alpha-aminovaleric acid, D-beta- 3,4-dihydroxyphenylserine and D-beta-3,4- methylenedioxyphenylserine

COG id: COG3616

COG function: function code E; Predicted amino acid aldolase or racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DSD1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: =4.1.2.42 [H]

Molecular weight: Translated: 42099; Mature: 42099

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNSENPNPQLSSQYQSLDTPFLLVDKPLMLKNLARLRNKTEALGAELRPHFKTVRALEA
CCCCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VNHLLPQKTSAITVSTVKEAEALAGEGYTNIVYAVGISEGKLPRIEQLIVKGAEVRVLLD
HHHHCCCCCCEEEEHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCEEEEHH
TVEQAEFVSHYCEQHNCAIPALIEVDCDGHRGGIHPDDPKLIEIANLLHQGAASFHGVLA
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
HAGESYLCFDQESLAEAARNEVQMTLKAANNLRAAAIPCDIVSIGSTPTAHSYQDLTGIT
HCCCCEEEECHHHHHHHHHHHHEEHEEHHCCCEEEECCEEEEECCCCCCCCCHHHHHHHH
EVRAGVYGFFDLVMTGIGVCQLDDIAASVVTTVIGHNKEKGWLFIDAGWMALSADRGTAS
HHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEECCCCCCC
QPKDCGYGLVAKSNGQLVEAMQVIGVNQEHGIIAAVGSDGINFDDFPVGCRLHILPNHAC
CCCCCCCEEEECCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCHH
ATASMHQHYHVFDTQDNTYEIWNRIQGW
HHHHHHCCEEEECCCCCHHHHHHHHCCC
>Mature Secondary Structure
MLNSENPNPQLSSQYQSLDTPFLLVDKPLMLKNLARLRNKTEALGAELRPHFKTVRALEA
CCCCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VNHLLPQKTSAITVSTVKEAEALAGEGYTNIVYAVGISEGKLPRIEQLIVKGAEVRVLLD
HHHHCCCCCCEEEEHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCEEEEHH
TVEQAEFVSHYCEQHNCAIPALIEVDCDGHRGGIHPDDPKLIEIANLLHQGAASFHGVLA
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
HAGESYLCFDQESLAEAARNEVQMTLKAANNLRAAAIPCDIVSIGSTPTAHSYQDLTGIT
HCCCCEEEECHHHHHHHHHHHHEEHEEHHCCCEEEECCEEEEECCCCCCCCCHHHHHHHH
EVRAGVYGFFDLVMTGIGVCQLDDIAASVVTTVIGHNKEKGWLFIDAGWMALSADRGTAS
HHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEECCCCCCC
QPKDCGYGLVAKSNGQLVEAMQVIGVNQEHGIIAAVGSDGINFDDFPVGCRLHILPNHAC
CCCCCCCEEEECCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCHH
ATASMHQHYHVFDTQDNTYEIWNRIQGW
HHHHHHCCEEEECCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9642221 [H]