Click here to switch to the map view.

The map label for this gene is yfbV [C]

Identifier: 167624515

GI number: 167624515

Start: 3147426

End: 3147869

Strand: Reverse

Name: yfbV [C]

Synonym: Shal_2594

Alternate gene names: 167624515

Gene position: 3147869-3147426 (Counterclockwise)

Preceding gene: 167624518

Following gene: 167624511

Centisome position: 60.22

GC content: 46.17

Gene sequence:

>444_bases
TTGAGCATTCAAGTTCTCAAAACATTGGGCGAAGGTCGTCGTTATATGAAGACCTGGCCTATGGTTCGACAACTCAGTTA
TTACTTTCCTGAGTATCGCGTCATGCGAGCCACTAAACTGGCATTGCCGTTAATGCCATTATTGGCTATTTTGGCTGCGG
CGAGTCAGTTGTACTTGCATGGCTGGAGCTATCTGCCCCAAGCGATAACCATCGCATTGTTCTTTATCAGCTTGCCTATT
CAAGGCTTACTCTGGCTCGGTTGGCGTTCTCGCCATCCTTTACCACTCTCTTTACTTGACTGGGGTAACCAGTTATCGAC
TAAATTAATGCAATTGGGCGTTAATTGTCGGCCGCTAGGCGCTAAAGCGTGTTATTTCGATATGGCGCTAATATTAAAAG
CGGCCTTTGAACGCTTAGATGCCAGTTATTGGGAAGAACTCTAG

Upstream 100 bases:

>100_bases
TTAAAAGAGCAAAGTTGTGTCTTACTCTGCTGTAGCCCTTGGGGCTGGCCGAGTGTTTATGCTAAAGTTAGGCTGTTAAT
TTTATTTATAGGTGCCATCG

Downstream 100 bases:

>100_bases
CTTATTTGCTTAGGTCCTTGCTTTAATCACGCGGTTAATAAACCGCGTTAATTCCCATATCAGTAAAGACTTTCTTAATC
TGTTCCATGGTTTCGGTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSIQVLKTLGEGRRYMKTWPMVRQLSYYFPEYRVMRATKLALPLMPLLAILAAASQLYLHGWSYLPQAITIALFFISLPI
QGLLWLGWRSRHPLPLSLLDWGNQLSTKLMQLGVNCRPLGAKACYFDMALILKAAFERLDASYWEEL

Sequences:

>Translated_147_residues
MSIQVLKTLGEGRRYMKTWPMVRQLSYYFPEYRVMRATKLALPLMPLLAILAAASQLYLHGWSYLPQAITIALFFISLPI
QGLLWLGWRSRHPLPLSLLDWGNQLSTKLMQLGVNCRPLGAKACYFDMALILKAAFERLDASYWEEL
>Mature_146_residues
SIQVLKTLGEGRRYMKTWPMVRQLSYYFPEYRVMRATKLALPLMPLLAILAAASQLYLHGWSYLPQAITIALFFISLPIQ
GLLWLGWRSRHPLPLSLLDWGNQLSTKLMQLGVNCRPLGAKACYFDMALILKAAFERLDASYWEEL

Specific function: Unknown

COG id: COG3092

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0208 family [H]

Homologues:

Organism=Escherichia coli, GI1788632, Length=146, Percent_Identity=37.6712328767123, Blast_Score=97, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007334 [H]

Pfam domain/function: PF04217 DUF412 [H]

EC number: NA

Molecular weight: Translated: 16952; Mature: 16820

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQVLKTLGEGRRYMKTWPMVRQLSYYFPEYRVMRATKLALPLMPLLAILAAASQLYLH
CCHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWSYLPQAITIALFFISLPIQGLLWLGWRSRHPLPLSLLDWGNQLSTKLMQLGVNCRPLG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCC
AKACYFDMALILKAAFERLDASYWEEL
CHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIQVLKTLGEGRRYMKTWPMVRQLSYYFPEYRVMRATKLALPLMPLLAILAAASQLYLH
CHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWSYLPQAITIALFFISLPIQGLLWLGWRSRHPLPLSLLDWGNQLSTKLMQLGVNCRPLG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCC
AKACYFDMALILKAAFERLDASYWEEL
CHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]