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The map label for this gene is yjcG [C]

Identifier: 167624486

GI number: 167624486

Start: 3105302

End: 3107020

Strand: Reverse

Name: yjcG [C]

Synonym: Shal_2565

Alternate gene names: 167624486

Gene position: 3107020-3105302 (Counterclockwise)

Preceding gene: 167624487

Following gene: 167624485

Centisome position: 59.44

GC content: 45.32

Gene sequence:

>1719_bases
ATGGACGTACAAACACTAACCTATCTGATTGTCGGGTTTACATTTGCCCTATATATCGGAATCGCGATCTGGTCAAGAGC
CGGATCGACTAAAGAATTTTATGTTGCAGGTGGTGGTGTTCACCCTGTACTTAACGGAATGGCAACGGCTGCCGATTGGA
TGTCTGCTGCATCATTTATCTCGCTAGCGGGTATCGTGTCATTCGTCGGTTACGACGGCTCGGTATACCTTATGGGCTGG
ACGGGTGGCTATGTGCTATTAGCACTCTGTATGGCTCCATACCTACGTAAGTTTGGTAAGTTTACGGTACCTGACTTTAT
TGGTGATCGTTATTACTCTCAAGCTGCGCGTACTGTCGCGGTAGTATGTGCCATCTTTATCTGCTTTACGTATATCGCAG
GGCAAATGCGTGGTGTAGGTGTTGTGTTCTCAAGATTCCTTGAGGTTGATGTTGATACCGGTGTTTATATCGGTATGGCG
GTTGTATTCTTTTATGCTGTGTTAGGCGGCATGAAGGGGATTACCTATACTCAGGTGGCTCAATACTGTGTGCTTATTTT
TGCTTTCATGGTGCCAGCTATCTTCATCTCGGTGATGATGACAGGCCACATCATTCCGCAAATTGGCTTTGGTGCTGAGT
TAGTTGATGCCGCGGGTAACGGTACGGGGGAATTCCTGCTTGATAAACTCGATGGACTGTCGACAGAGCTTGGCTTCTCA
CAATATACCGAAGGCTCTAAGAGCATGGTTGATGTGTTCTTTATTACTGGAGCTTTGATGTTCGGTACTGCGGGTCTGCC
TCATGTTATTGTTCGTTTCTTCACGGTACCCAAAGTAAAAGATGCACGTGTATCAGCGGGTTGGGCATTAGTATTTATCG
CTATCATGTATACCACTATTCCAGCACTGTCTGCGTTCTCTCGTGTGAACATGATTGAAACCATTAATGGTCCTGAAATG
ACTGGTACACCTTATGAACAGTCTCCTGAGTGGATTAAGAACTGGGAAAAGACGGGATTAATTACGTGGGAAGATAAGGA
TGATAATGGCCTTATTTATTACGCAAATGGTCCTGAAAATGAGATGAATATTGACCGCGATATCATCGTATTAGCGACAC
CAGAAATTGCCAATCTACCAGCATGGGTTATTGCACTTGTAGCGGCTGGTGGCCTAGCGGCTGCATTGTCTACTTCAGCG
GGTCTATTGCTGGTTATCTCTACATCGGTATCTCATGACTTACTGAAGAAAAACTTTATGCCTGATATTTCCGATAAAAA
AGAGCTGATGTATGCACGTATTGCTGCTGCGGCCGGAATTGTGATGGCAGGTTACTTCGGTATTAATCCTCCTGGGTTTG
TGGCAGCGGTGGTCGCAATTGCGTTCGGTCTCGCGGCATCGTCACTGTTCCCTGCAATCATCATGGGTATTTTCTCTAAG
ACTGTAAACAAAGAGGGTGCAATTGCAGGTATGGTAACGGGTCTACTATTTACTGCAGCTTACATTGTTTACTTCAAGTT
TGTTAACCCAAGCGCTAACAACGCCGATAATTGGCTGTTTGGTGTTTCACCAGAAGGTATCGGTCTATTAGGTATGGTGA
TTAACTTTGGTGTGGCATTTGCTGTAAGTAAAGTGACAACCGCTGTACCACAAGATGTTGTTGATATGGTTGAGTCGATT
CGCTTCCCTAAAGGGTCGGGCGAAGCACAAGATCACTAA

Upstream 100 bases:

>100_bases
TTTTGTCTATGTCGCTAAGGCGAATGCATTAGACAAAAAATATGATGTACACGAAGACTAAATATAACCCGAACCAATCC
ATACAATAAGGAATCATGAG

Downstream 100 bases:

>100_bases
CTGTTACTAGAGATTAGAGCAAGGTAAAAGAGCGCTTCGGCGCTCTTTTTGTTTATCTATACCCAAGCCTTTAGTCGAAT
AGAGCTCATAGGGGAAACCG

Product: Na+/solute symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 572; Mature: 572

Protein sequence:

>572_residues
MDVQTLTYLIVGFTFALYIGIAIWSRAGSTKEFYVAGGGVHPVLNGMATAADWMSAASFISLAGIVSFVGYDGSVYLMGW
TGGYVLLALCMAPYLRKFGKFTVPDFIGDRYYSQAARTVAVVCAIFICFTYIAGQMRGVGVVFSRFLEVDVDTGVYIGMA
VVFFYAVLGGMKGITYTQVAQYCVLIFAFMVPAIFISVMMTGHIIPQIGFGAELVDAAGNGTGEFLLDKLDGLSTELGFS
QYTEGSKSMVDVFFITGALMFGTAGLPHVIVRFFTVPKVKDARVSAGWALVFIAIMYTTIPALSAFSRVNMIETINGPEM
TGTPYEQSPEWIKNWEKTGLITWEDKDDNGLIYYANGPENEMNIDRDIIVLATPEIANLPAWVIALVAAGGLAAALSTSA
GLLLVISTSVSHDLLKKNFMPDISDKKELMYARIAAAAGIVMAGYFGINPPGFVAAVVAIAFGLAASSLFPAIIMGIFSK
TVNKEGAIAGMVTGLLFTAAYIVYFKFVNPSANNADNWLFGVSPEGIGLLGMVINFGVAFAVSKVTTAVPQDVVDMVESI
RFPKGSGEAQDH

Sequences:

>Translated_572_residues
MDVQTLTYLIVGFTFALYIGIAIWSRAGSTKEFYVAGGGVHPVLNGMATAADWMSAASFISLAGIVSFVGYDGSVYLMGW
TGGYVLLALCMAPYLRKFGKFTVPDFIGDRYYSQAARTVAVVCAIFICFTYIAGQMRGVGVVFSRFLEVDVDTGVYIGMA
VVFFYAVLGGMKGITYTQVAQYCVLIFAFMVPAIFISVMMTGHIIPQIGFGAELVDAAGNGTGEFLLDKLDGLSTELGFS
QYTEGSKSMVDVFFITGALMFGTAGLPHVIVRFFTVPKVKDARVSAGWALVFIAIMYTTIPALSAFSRVNMIETINGPEM
TGTPYEQSPEWIKNWEKTGLITWEDKDDNGLIYYANGPENEMNIDRDIIVLATPEIANLPAWVIALVAAGGLAAALSTSA
GLLLVISTSVSHDLLKKNFMPDISDKKELMYARIAAAAGIVMAGYFGINPPGFVAAVVAIAFGLAASSLFPAIIMGIFSK
TVNKEGAIAGMVTGLLFTAAYIVYFKFVNPSANNADNWLFGVSPEGIGLLGMVINFGVAFAVSKVTTAVPQDVVDMVESI
RFPKGSGEAQDH
>Mature_572_residues
MDVQTLTYLIVGFTFALYIGIAIWSRAGSTKEFYVAGGGVHPVLNGMATAADWMSAASFISLAGIVSFVGYDGSVYLMGW
TGGYVLLALCMAPYLRKFGKFTVPDFIGDRYYSQAARTVAVVCAIFICFTYIAGQMRGVGVVFSRFLEVDVDTGVYIGMA
VVFFYAVLGGMKGITYTQVAQYCVLIFAFMVPAIFISVMMTGHIIPQIGFGAELVDAAGNGTGEFLLDKLDGLSTELGFS
QYTEGSKSMVDVFFITGALMFGTAGLPHVIVRFFTVPKVKDARVSAGWALVFIAIMYTTIPALSAFSRVNMIETINGPEM
TGTPYEQSPEWIKNWEKTGLITWEDKDDNGLIYYANGPENEMNIDRDIIVLATPEIANLPAWVIALVAAGGLAAALSTSA
GLLLVISTSVSHDLLKKNFMPDISDKKELMYARIAAAAGIVMAGYFGINPPGFVAAVVAIAFGLAASSLFPAIIMGIFSK
TVNKEGAIAGMVTGLLFTAAYIVYFKFVNPSANNADNWLFGVSPEGIGLLGMVINFGVAFAVSKVTTAVPQDVVDMVESI
RFPKGSGEAQDH

Specific function: Unknown

COG id: COG4147

COG function: function code R; Predicted symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Escherichia coli, GI1790503, Length=493, Percent_Identity=26.5720081135903, Blast_Score=139, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR019899 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 61179; Mature: 61179

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1356967 [H]