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The map label for this gene is ydjA [H]

Identifier: 167624378

GI number: 167624378

Start: 2960671

End: 2961276

Strand: Reverse

Name: ydjA [H]

Synonym: Shal_2455

Alternate gene names: 167624378

Gene position: 2961276-2960671 (Counterclockwise)

Preceding gene: 167624379

Following gene: 167624377

Centisome position: 56.65

GC content: 49.5

Gene sequence:

>606_bases
ATGGGGACTCATTTGTTAATCCCTATTTTTCGTACAAACATTATTAAGGATAATAAGTTGGACGCATTAGAATTATTATT
GACTCGCCAATCAACCCCACGACTGATTACTCCAGCCCCTAATACCCAGCAGTTGCAGCATATTCTCGATGCCGCGACGC
GAGCGCCCGACCATGCGGGGTTGACACCTTGGGAGTTTATTATTGCCGAAGAAGATGGTTTGGCACGCCTAGGAGAGGTG
TTTGTTAATGCGCTGACCTTAAAAGGTGCAGACGCAGACTTTATCGCTAAAGCTCAAAACATGCCTCTAAGAGCCCCGAT
GGTGATTACCGTGGTCGCTAAGGTGATTGAACACCCCAAAGTGCCAGCACTCGAGCAGCATCTAGCTGCTGGATGCGCTG
CGATGGCGATGCAACAAGCGGCGTTTGCCCAGGGATTAGGAGGGATTTGGCGCACGGGGGAGCTCGCGTTCGATGCAAAC
GTGCATCAATTATTGGGGCTACAAGCAGATGACCAAATAGTGGGGTTTCTCTATTTAGGCACTCCAGCAGTCAATGCCCC
GGTGAAGGCTCTAAAAGATGGGATGAGTTTCGCTCGATATTTATAG

Upstream 100 bases:

>100_bases
TTGACTGGTATAAGTAACAGGTTTATAGAGTAGATAAATGATTAAACAAGCCAAATCCCACTAAATAGGTGGGATTTTTT
TTGCGCCCTTGATACTCTCA

Downstream 100 bases:

>100_bases
CGCTTTATCCTGATTATTATGATAAAGATATCGTGTGTGAGTTGAGCTAGTTTCATCAAGAGTTAGCTTAAAATGAGTCT
GTTACCATGCTAGTGTAGAA

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MGTHLLIPIFRTNIIKDNKLDALELLLTRQSTPRLITPAPNTQQLQHILDAATRAPDHAGLTPWEFIIAEEDGLARLGEV
FVNALTLKGADADFIAKAQNMPLRAPMVITVVAKVIEHPKVPALEQHLAAGCAAMAMQQAAFAQGLGGIWRTGELAFDAN
VHQLLGLQADDQIVGFLYLGTPAVNAPVKALKDGMSFARYL

Sequences:

>Translated_201_residues
MGTHLLIPIFRTNIIKDNKLDALELLLTRQSTPRLITPAPNTQQLQHILDAATRAPDHAGLTPWEFIIAEEDGLARLGEV
FVNALTLKGADADFIAKAQNMPLRAPMVITVVAKVIEHPKVPALEQHLAAGCAAMAMQQAAFAQGLGGIWRTGELAFDAN
VHQLLGLQADDQIVGFLYLGTPAVNAPVKALKDGMSFARYL
>Mature_200_residues
GTHLLIPIFRTNIIKDNKLDALELLLTRQSTPRLITPAPNTQQLQHILDAATRAPDHAGLTPWEFIIAEEDGLARLGEVF
VNALTLKGADADFIAKAQNMPLRAPMVITVVAKVIEHPKVPALEQHLAAGCAAMAMQQAAFAQGLGGIWRTGELAFDANV
HQLLGLQADDQIVGFLYLGTPAVNAPVKALKDGMSFARYL

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=183, Percent_Identity=49.1803278688525, Blast_Score=178, Evalue=2e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 21690; Mature: 21558

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTHLLIPIFRTNIIKDNKLDALELLLTRQSTPRLITPAPNTQQLQHILDAATRAPDHAG
CCCEEEEHHHHHHCCCCCCHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCC
LTPWEFIIAEEDGLARLGEVFVNALTLKGADADFIAKAQNMPLRAPMVITVVAKVIEHPK
CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
VPALEQHLAAGCAAMAMQQAAFAQGLGGIWRTGELAFDANVHQLLGLQADDQIVGFLYLG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHCCCCCCCEEEEEEEC
TPAVNAPVKALKDGMSFARYL
CCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GTHLLIPIFRTNIIKDNKLDALELLLTRQSTPRLITPAPNTQQLQHILDAATRAPDHAG
CCEEEEHHHHHHCCCCCCHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCC
LTPWEFIIAEEDGLARLGEVFVNALTLKGADADFIAKAQNMPLRAPMVITVVAKVIEHPK
CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
VPALEQHLAAGCAAMAMQQAAFAQGLGGIWRTGELAFDANVHQLLGLQADDQIVGFLYLG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHCCCCCCCEEEEEEEC
TPAVNAPVKALKDGMSFARYL
CCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]