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The map label for this gene is adrA [H]

Identifier: 167624334

GI number: 167624334

Start: 2911502

End: 2912449

Strand: Reverse

Name: adrA [H]

Synonym: Shal_2411

Alternate gene names: 167624334

Gene position: 2912449-2911502 (Counterclockwise)

Preceding gene: 167624335

Following gene: 167624331

Centisome position: 55.72

GC content: 37.76

Gene sequence:

>948_bases
GTGAGCGAAGCTAAAGACCTACTGATCGCTAGCTTAACTGCTGAAAATGAAGCGCTTCGAGAGAAAAGTCGATTGTTAAA
AACGATATTGAGTAATGCACCACTGCTCATCTCTGCTAAAGACACTTCAGGTAATATACTCTTCACTAATCCTCAATTTA
AGCTGCTTGAGGGCCCCGCTCCTGAAGACTATGTTAATAGAAATGTGTATGAGTTATTTCCGAAAAATATTGCTGATGAA
CTTTGGAACAATGATCTAAGAGCACAAAATTCTGTTGACCCAATCCACGTAGAAGAACAAGTCCAACATAAAGACGGAAA
CATACATTCTTATCACACAACAAAGTTTCGGCTATTAGGAAAAGCCGATGAAGTTATTGGCACCTGCGCAATTTCTATTG
ATATATCGCATGCAAAGAAACATGAGTTCGACGCATATCATGACTCTCTTTCTGGATTGCATAATTATCGATATTTCGTA
GAAAACCTTCCTAGAGATATTGCTCGTGCTAAGCGCAGCAATAAATTCCTTAATGTGGTGCTTATTGACTTAGACTCCTT
TAAAACTATTAATGATAACCTAGGCCATGATCAGGGGAATACTGTACTGATCGCTGTAGCGAAAGCACTAAAAGAGTTGT
TCCATCGCCCTGATGATAAATATATGCGAATTGGTGGCGATGAATTTGCATTGATCTTCATGAGTAATGATATAGACAGC
GCGAGAAATATCATTACTCAGGTGCACACTAACATCAATCATGCAATCGAGATTATACTTGGTAACACTGGGTTAATCTG
TACAAACTCTATTGGGGCAAAGTGTTTTAAGCCTGATGAGACTGCTGATTTTGATACTGTTTATAAACTGATCGATGATG
CTCTTTATAAAGTAAAAAAGAATGGCAAAAATAGTATTCATGTCTTTGGAGATATACTGGAACGATAA

Upstream 100 bases:

>100_bases
CACGCCCTTAACAGGGCCTTATATGTAGAACTCAAGACATAAAGTGTGGACATCGTTTATAGTAGTAAGTATGGTCAATA
CAATATCCTAGGAGGGGAAA

Downstream 100 bases:

>100_bases
CTGGCCAATATAAGGATGAGTATTTTCTGTTAACGTATATAACCAGTACATCAATGATAGCCAGCATGTAGAAGCTTCGC
GGCTCTCGCATCGGTATCTT

Product: PAS/PAC sensor-containing diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MSEAKDLLIASLTAENEALREKSRLLKTILSNAPLLISAKDTSGNILFTNPQFKLLEGPAPEDYVNRNVYELFPKNIADE
LWNNDLRAQNSVDPIHVEEQVQHKDGNIHSYHTTKFRLLGKADEVIGTCAISIDISHAKKHEFDAYHDSLSGLHNYRYFV
ENLPRDIARAKRSNKFLNVVLIDLDSFKTINDNLGHDQGNTVLIAVAKALKELFHRPDDKYMRIGGDEFALIFMSNDIDS
ARNIITQVHTNINHAIEIILGNTGLICTNSIGAKCFKPDETADFDTVYKLIDDALYKVKKNGKNSIHVFGDILER

Sequences:

>Translated_315_residues
MSEAKDLLIASLTAENEALREKSRLLKTILSNAPLLISAKDTSGNILFTNPQFKLLEGPAPEDYVNRNVYELFPKNIADE
LWNNDLRAQNSVDPIHVEEQVQHKDGNIHSYHTTKFRLLGKADEVIGTCAISIDISHAKKHEFDAYHDSLSGLHNYRYFV
ENLPRDIARAKRSNKFLNVVLIDLDSFKTINDNLGHDQGNTVLIAVAKALKELFHRPDDKYMRIGGDEFALIFMSNDIDS
ARNIITQVHTNINHAIEIILGNTGLICTNSIGAKCFKPDETADFDTVYKLIDDALYKVKKNGKNSIHVFGDILER
>Mature_314_residues
SEAKDLLIASLTAENEALREKSRLLKTILSNAPLLISAKDTSGNILFTNPQFKLLEGPAPEDYVNRNVYELFPKNIADEL
WNNDLRAQNSVDPIHVEEQVQHKDGNIHSYHTTKFRLLGKADEVIGTCAISIDISHAKKHEFDAYHDSLSGLHNYRYFVE
NLPRDIARAKRSNKFLNVVLIDLDSFKTINDNLGHDQGNTVLIAVAKALKELFHRPDDKYMRIGGDEFALIFMSNDIDSA
RNIITQVHTNINHAIEIILGNTGLICTNSIGAKCFKPDETADFDTVYKLIDDALYKVKKNGKNSIHVFGDILER

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI1786584, Length=173, Percent_Identity=31.2138728323699, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1788381, Length=260, Percent_Identity=27.3076923076923, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI87081881, Length=167, Percent_Identity=32.9341317365269, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87082007, Length=166, Percent_Identity=28.3132530120482, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI145693134, Length=162, Percent_Identity=29.0123456790123, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI87081977, Length=167, Percent_Identity=35.3293413173653, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1787262, Length=169, Percent_Identity=29.585798816568, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI87081974, Length=158, Percent_Identity=31.0126582278481, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787056, Length=128, Percent_Identity=33.59375, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1788085, Length=169, Percent_Identity=28.4023668639053, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1787541, Length=292, Percent_Identity=26.3698630136986, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1787816, Length=158, Percent_Identity=31.6455696202532, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR007894 [H]

Pfam domain/function: PF00990 GGDEF; PF05230 MASE2 [H]

EC number: NA

Molecular weight: Translated: 35516; Mature: 35384

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: PS50112 PAS ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAKDLLIASLTAENEALREKSRLLKTILSNAPLLISAKDTSGNILFTNPQFKLLEGPA
CCCHHHHEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCEEEECCCC
PEDYVNRNVYELFPKNIADELWNNDLRAQNSVDPIHVEEQVQHKDGNIHSYHTTKFRLLG
CHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHCCCCEEEEECEEEEEEC
KADEVIGTCAISIDISHAKKHEFDAYHDSLSGLHNYRYFVENLPRDIARAKRSNKFLNVV
CHHHEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEE
LIDLDSFKTINDNLGHDQGNTVLIAVAKALKELFHRPDDKYMRIGGDEFALIFMSNDIDS
EEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCEEEECCCEEEEEEEECCHHH
ARNIITQVHTNINHAIEIILGNTGLICTNSIGAKCFKPDETADFDTVYKLIDDALYKVKK
HHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHH
NGKNSIHVFGDILER
CCCCEEEEHHHHHCC
>Mature Secondary Structure 
SEAKDLLIASLTAENEALREKSRLLKTILSNAPLLISAKDTSGNILFTNPQFKLLEGPA
CCHHHHEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCEEEECCCC
PEDYVNRNVYELFPKNIADELWNNDLRAQNSVDPIHVEEQVQHKDGNIHSYHTTKFRLLG
CHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHCCCCEEEEECEEEEEEC
KADEVIGTCAISIDISHAKKHEFDAYHDSLSGLHNYRYFVENLPRDIARAKRSNKFLNVV
CHHHEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEE
LIDLDSFKTINDNLGHDQGNTVLIAVAKALKELFHRPDDKYMRIGGDEFALIFMSNDIDS
EEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCEEEECCCEEEEEEEECCHHH
ARNIITQVHTNINHAIEIILGNTGLICTNSIGAKCFKPDETADFDTVYKLIDDALYKVKK
HHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHH
NGKNSIHVFGDILER
CCCCEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]