Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is yceG [C]

Identifier: 167624301

GI number: 167624301

Start: 2877224

End: 2878231

Strand: Reverse

Name: yceG [C]

Synonym: Shal_2377

Alternate gene names: 167624301

Gene position: 2878231-2877224 (Counterclockwise)

Preceding gene: 167624302

Following gene: 167624300

Centisome position: 55.07

GC content: 43.15

Gene sequence:

>1008_bases
ATGAAAAAAATTATAATCAGCCTCTTCGCAACCGGATTTACTCTACTTACTATCGGCGCCGTAGCGGGTTACTGGACCTA
TCAAACACTGCTTGCCTATGGCGAACAACCGATAAAAGCCACCTCTGTACAAGAGTTAACGATTAAACGCGGTACTACGT
TCAATCAATTTATCTCTATTTTAGAATCAGAGAAGCTGATTGACGAAGGCTGGAAACTCAAATGGTTAGTACGTTTAAAG
CCAGAATTAGCCAACATTCGCTCAGGTCTTTATGAGGTTACGCCAAACGAGAGCCTCAATAGCCTGCTGGCTAAGATCGT
TAGTGGCAAGGAGAAGTCTTTCGCTGTGACCCTATTAGAGGGACAAACAGTGAAAGAGTGGCAACTCGTACTTGAACAGC
AAGCTAGGTTACAACAAGAGCAAGATGTGTTTAATCAGGTACTTGTTGCTAATGGTGATGACTCGGGCTTGCCTGAGGGC
AAGTTTTTCCCGGATACTTATCATTATCGAGCGGAAAGTACTGAGCAGGCATTATTAAATAAAAGTTATTTAAAGATGAA
ACTCGAGCTTGAGAAAGCGTGGCAAGGACGTCAGCAAGGCTTGCCGTTAAAATCCGCTTATGAGCTACTCATCTTAGCCT
CAATTATTGAGAAAGAAACGGGTAAAGCGAGTGAGCGACCTTGGATCGCTGCGGTATTTGTCAATCGTCTGCGTAAAGGG
ATGCGCTTGCAAACGGATCCAACGGTTATTTACGGCATGGGTGACAGATATAACGGTAATATTACCCGTAAAGATCTACG
TGAAACGACCGCATTCAATACATACAGAATTAACGGCTTACCACCAACGCCTATTGCAGCTCCAAGTTTAGCGGCAATAC
AAGCGGCGGCGCATCCTGCTGACGTTGATTATTTTTATTTCGTATCACGAAATGATGGTAGCCATATTTTTTCGAAAACA
TTGACCGAACATAATCGTGCAGTGAATAAATATCAGAGAAATCGATGA

Upstream 100 bases:

>100_bases
ATAGCCTTTTTGGGCTTGTCGATGTTATGACAATCGACGATTTTACATTTACCCCTGCAACTTGGACTTCAAGCTTAAGA
GAACAACTCAGTCTGACACT

Downstream 100 bases:

>100_bases
ATACACAAACTGAAAATTCCGCCAAGTTTATCGTAATTGAAGGGCTTGAAGGTGCGGGTAAATCAAGTGCAATCGCATTG
GTTAGAGATTTTATTGAGAA

Product: aminodeoxychorismate lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MKKIIISLFATGFTLLTIGAVAGYWTYQTLLAYGEQPIKATSVQELTIKRGTTFNQFISILESEKLIDEGWKLKWLVRLK
PELANIRSGLYEVTPNESLNSLLAKIVSGKEKSFAVTLLEGQTVKEWQLVLEQQARLQQEQDVFNQVLVANGDDSGLPEG
KFFPDTYHYRAESTEQALLNKSYLKMKLELEKAWQGRQQGLPLKSAYELLILASIIEKETGKASERPWIAAVFVNRLRKG
MRLQTDPTVIYGMGDRYNGNITRKDLRETTAFNTYRINGLPPTPIAAPSLAAIQAAAHPADVDYFYFVSRNDGSHIFSKT
LTEHNRAVNKYQRNR

Sequences:

>Translated_335_residues
MKKIIISLFATGFTLLTIGAVAGYWTYQTLLAYGEQPIKATSVQELTIKRGTTFNQFISILESEKLIDEGWKLKWLVRLK
PELANIRSGLYEVTPNESLNSLLAKIVSGKEKSFAVTLLEGQTVKEWQLVLEQQARLQQEQDVFNQVLVANGDDSGLPEG
KFFPDTYHYRAESTEQALLNKSYLKMKLELEKAWQGRQQGLPLKSAYELLILASIIEKETGKASERPWIAAVFVNRLRKG
MRLQTDPTVIYGMGDRYNGNITRKDLRETTAFNTYRINGLPPTPIAAPSLAAIQAAAHPADVDYFYFVSRNDGSHIFSKT
LTEHNRAVNKYQRNR
>Mature_335_residues
MKKIIISLFATGFTLLTIGAVAGYWTYQTLLAYGEQPIKATSVQELTIKRGTTFNQFISILESEKLIDEGWKLKWLVRLK
PELANIRSGLYEVTPNESLNSLLAKIVSGKEKSFAVTLLEGQTVKEWQLVLEQQARLQQEQDVFNQVLVANGDDSGLPEG
KFFPDTYHYRAESTEQALLNKSYLKMKLELEKAWQGRQQGLPLKSAYELLILASIIEKETGKASERPWIAAVFVNRLRKG
MRLQTDPTVIYGMGDRYNGNITRKDLRETTAFNTYRINGLPPTPIAAPSLAAIQAAAHPADVDYFYFVSRNDGSHIFSKT
LTEHNRAVNKYQRNR

Specific function: Unknown

COG id: COG1559

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0755 family [H]

Homologues:

Organism=Escherichia coli, GI1787339, Length=317, Percent_Identity=41.6403785488959, Blast_Score=244, Evalue=7e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003770 [H]

Pfam domain/function: PF02618 ADC_lyase [H]

EC number: NA

Molecular weight: Translated: 37926; Mature: 37926

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIIISLFATGFTLLTIGAVAGYWTYQTLLAYGEQPIKATSVQELTIKRGTTFNQFISI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHH
LESEKLIDEGWKLKWLVRLKPELANIRSGLYEVTPNESLNSLLAKIVSGKEKSFAVTLLE
HHHHHHHHCCCCEEEEEEECCHHHHHHCCCEEECCCHHHHHHHHHHHCCCCCCEEEEEEC
GQTVKEWQLVLEQQARLQQEQDVFNQVLVANGDDSGLPEGKFFPDTYHYRAESTEQALLN
CCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
KSYLKMKLELEKAWQGRQQGLPLKSAYELLILASIIEKETGKASERPWIAAVFVNRLRKG
HHHHHEEEEHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
MRLQTDPTVIYGMGDRYNGNITRKDLRETTAFNTYRINGLPPTPIAAPSLAAIQAAAHPA
CEECCCCEEEEECCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCCC
DVDYFYFVSRNDGSHIFSKTLTEHNRAVNKYQRNR
CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKIIISLFATGFTLLTIGAVAGYWTYQTLLAYGEQPIKATSVQELTIKRGTTFNQFISI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHH
LESEKLIDEGWKLKWLVRLKPELANIRSGLYEVTPNESLNSLLAKIVSGKEKSFAVTLLE
HHHHHHHHCCCCEEEEEEECCHHHHHHCCCEEECCCHHHHHHHHHHHCCCCCCEEEEEEC
GQTVKEWQLVLEQQARLQQEQDVFNQVLVANGDDSGLPEGKFFPDTYHYRAESTEQALLN
CCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
KSYLKMKLELEKAWQGRQQGLPLKSAYELLILASIIEKETGKASERPWIAAVFVNRLRKG
HHHHHEEEEHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
MRLQTDPTVIYGMGDRYNGNITRKDLRETTAFNTYRINGLPPTPIAAPSLAAIQAAAHPA
CEECCCCEEEEECCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCCC
DVDYFYFVSRNDGSHIFSKTLTEHNRAVNKYQRNR
CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]