| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is yceG [C]
Identifier: 167624301
GI number: 167624301
Start: 2877224
End: 2878231
Strand: Reverse
Name: yceG [C]
Synonym: Shal_2377
Alternate gene names: 167624301
Gene position: 2878231-2877224 (Counterclockwise)
Preceding gene: 167624302
Following gene: 167624300
Centisome position: 55.07
GC content: 43.15
Gene sequence:
>1008_bases ATGAAAAAAATTATAATCAGCCTCTTCGCAACCGGATTTACTCTACTTACTATCGGCGCCGTAGCGGGTTACTGGACCTA TCAAACACTGCTTGCCTATGGCGAACAACCGATAAAAGCCACCTCTGTACAAGAGTTAACGATTAAACGCGGTACTACGT TCAATCAATTTATCTCTATTTTAGAATCAGAGAAGCTGATTGACGAAGGCTGGAAACTCAAATGGTTAGTACGTTTAAAG CCAGAATTAGCCAACATTCGCTCAGGTCTTTATGAGGTTACGCCAAACGAGAGCCTCAATAGCCTGCTGGCTAAGATCGT TAGTGGCAAGGAGAAGTCTTTCGCTGTGACCCTATTAGAGGGACAAACAGTGAAAGAGTGGCAACTCGTACTTGAACAGC AAGCTAGGTTACAACAAGAGCAAGATGTGTTTAATCAGGTACTTGTTGCTAATGGTGATGACTCGGGCTTGCCTGAGGGC AAGTTTTTCCCGGATACTTATCATTATCGAGCGGAAAGTACTGAGCAGGCATTATTAAATAAAAGTTATTTAAAGATGAA ACTCGAGCTTGAGAAAGCGTGGCAAGGACGTCAGCAAGGCTTGCCGTTAAAATCCGCTTATGAGCTACTCATCTTAGCCT CAATTATTGAGAAAGAAACGGGTAAAGCGAGTGAGCGACCTTGGATCGCTGCGGTATTTGTCAATCGTCTGCGTAAAGGG ATGCGCTTGCAAACGGATCCAACGGTTATTTACGGCATGGGTGACAGATATAACGGTAATATTACCCGTAAAGATCTACG TGAAACGACCGCATTCAATACATACAGAATTAACGGCTTACCACCAACGCCTATTGCAGCTCCAAGTTTAGCGGCAATAC AAGCGGCGGCGCATCCTGCTGACGTTGATTATTTTTATTTCGTATCACGAAATGATGGTAGCCATATTTTTTCGAAAACA TTGACCGAACATAATCGTGCAGTGAATAAATATCAGAGAAATCGATGA
Upstream 100 bases:
>100_bases ATAGCCTTTTTGGGCTTGTCGATGTTATGACAATCGACGATTTTACATTTACCCCTGCAACTTGGACTTCAAGCTTAAGA GAACAACTCAGTCTGACACT
Downstream 100 bases:
>100_bases ATACACAAACTGAAAATTCCGCCAAGTTTATCGTAATTGAAGGGCTTGAAGGTGCGGGTAAATCAAGTGCAATCGCATTG GTTAGAGATTTTATTGAGAA
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MKKIIISLFATGFTLLTIGAVAGYWTYQTLLAYGEQPIKATSVQELTIKRGTTFNQFISILESEKLIDEGWKLKWLVRLK PELANIRSGLYEVTPNESLNSLLAKIVSGKEKSFAVTLLEGQTVKEWQLVLEQQARLQQEQDVFNQVLVANGDDSGLPEG KFFPDTYHYRAESTEQALLNKSYLKMKLELEKAWQGRQQGLPLKSAYELLILASIIEKETGKASERPWIAAVFVNRLRKG MRLQTDPTVIYGMGDRYNGNITRKDLRETTAFNTYRINGLPPTPIAAPSLAAIQAAAHPADVDYFYFVSRNDGSHIFSKT LTEHNRAVNKYQRNR
Sequences:
>Translated_335_residues MKKIIISLFATGFTLLTIGAVAGYWTYQTLLAYGEQPIKATSVQELTIKRGTTFNQFISILESEKLIDEGWKLKWLVRLK PELANIRSGLYEVTPNESLNSLLAKIVSGKEKSFAVTLLEGQTVKEWQLVLEQQARLQQEQDVFNQVLVANGDDSGLPEG KFFPDTYHYRAESTEQALLNKSYLKMKLELEKAWQGRQQGLPLKSAYELLILASIIEKETGKASERPWIAAVFVNRLRKG MRLQTDPTVIYGMGDRYNGNITRKDLRETTAFNTYRINGLPPTPIAAPSLAAIQAAAHPADVDYFYFVSRNDGSHIFSKT LTEHNRAVNKYQRNR >Mature_335_residues MKKIIISLFATGFTLLTIGAVAGYWTYQTLLAYGEQPIKATSVQELTIKRGTTFNQFISILESEKLIDEGWKLKWLVRLK PELANIRSGLYEVTPNESLNSLLAKIVSGKEKSFAVTLLEGQTVKEWQLVLEQQARLQQEQDVFNQVLVANGDDSGLPEG KFFPDTYHYRAESTEQALLNKSYLKMKLELEKAWQGRQQGLPLKSAYELLILASIIEKETGKASERPWIAAVFVNRLRKG MRLQTDPTVIYGMGDRYNGNITRKDLRETTAFNTYRINGLPPTPIAAPSLAAIQAAAHPADVDYFYFVSRNDGSHIFSKT LTEHNRAVNKYQRNR
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=317, Percent_Identity=41.6403785488959, Blast_Score=244, Evalue=7e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 37926; Mature: 37926
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIIISLFATGFTLLTIGAVAGYWTYQTLLAYGEQPIKATSVQELTIKRGTTFNQFISI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHH LESEKLIDEGWKLKWLVRLKPELANIRSGLYEVTPNESLNSLLAKIVSGKEKSFAVTLLE HHHHHHHHCCCCEEEEEEECCHHHHHHCCCEEECCCHHHHHHHHHHHCCCCCCEEEEEEC GQTVKEWQLVLEQQARLQQEQDVFNQVLVANGDDSGLPEGKFFPDTYHYRAESTEQALLN CCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHH KSYLKMKLELEKAWQGRQQGLPLKSAYELLILASIIEKETGKASERPWIAAVFVNRLRKG HHHHHEEEEHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC MRLQTDPTVIYGMGDRYNGNITRKDLRETTAFNTYRINGLPPTPIAAPSLAAIQAAAHPA CEECCCCEEEEECCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCCC DVDYFYFVSRNDGSHIFSKTLTEHNRAVNKYQRNR CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKIIISLFATGFTLLTIGAVAGYWTYQTLLAYGEQPIKATSVQELTIKRGTTFNQFISI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHH LESEKLIDEGWKLKWLVRLKPELANIRSGLYEVTPNESLNSLLAKIVSGKEKSFAVTLLE HHHHHHHHCCCCEEEEEEECCHHHHHHCCCEEECCCHHHHHHHHHHHCCCCCCEEEEEEC GQTVKEWQLVLEQQARLQQEQDVFNQVLVANGDDSGLPEGKFFPDTYHYRAESTEQALLN CCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHH KSYLKMKLELEKAWQGRQQGLPLKSAYELLILASIIEKETGKASERPWIAAVFVNRLRKG HHHHHEEEEHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC MRLQTDPTVIYGMGDRYNGNITRKDLRETTAFNTYRINGLPPTPIAAPSLAAIQAAAHPA CEECCCCEEEEECCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCCC DVDYFYFVSRNDGSHIFSKTLTEHNRAVNKYQRNR CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]