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The map label for this gene is yfgC [C]

Identifier: 167624252

GI number: 167624252

Start: 2812895

End: 2814352

Strand: Direct

Name: yfgC [C]

Synonym: Shal_2328

Alternate gene names: 167624252

Gene position: 2812895-2814352 (Clockwise)

Preceding gene: 167624249

Following gene: 167624253

Centisome position: 53.82

GC content: 43.14

Gene sequence:

>1458_bases
TTGAGTAAATTAACATTATCTAAATCCGTCATTGCAGGTGCCCTCTCTTTTATTTTATGCACGAGTTCACCTGTTAGTTA
TGCAAATAACGATTTACCTGACTTGGGTACAGCGGCTGTAAATACGTTCAGCTTAGAAAAAGAAACTCAAGTGGGTGATG
CGTATATGCGCGTGATCCGTGGTTCTGCGCCGATGCTCAATGATCCGGTGCTAAACCAATATTTAACAGAGCTAGGTAAT
AAGCTAGTTGCTAATGCTACAGGGGTCAAAACCCCATTTTACTTCTTCTTATTAAGAAACGATGAGATTAATGCATTTGC
ATTTTTCGGTGGTCATGTCGGTGTACATACCGGACTTTTTCTTAATGCCGACACCGAAAGCGAGCTCGCCTCGGTGATTG
GTCACGAAATTACTCACGTTACCCAGCGCCATTTAGCACGATCTATTGAAGCGCAGCAGAAAACATCCCCAGCAACCATT
GCTGGTATGTTAGGGGCAATTTTGTTAACCATCGCCTCTCCACAAGCGGGTATGGCGGCATTGGCAACGACTCAAGCATT
AGCCACCCAGTCGAAGATTAACTACACTCGCCTACATGAAAAAGAAGCTGACCGCATCGGTATGCAGGTCATGGTCGATG
CAGGCTTTGACCCAAATGGGGCTGCCGACTTCTTTGGTAAACTTGCCACCCGATATCGCTTCACAACTAAACCACCGCAA
ATGCTATTGACTCACCCCTTACCCGAGTCACGTATTTCAGAGGCCCGTATTCGCGCTGAGCGTTATCCATTAAGGCATAT
ACCCGACAACCTAAACTTCCAACTGGCTAAGGCACGAATTCAAGTTAGGTTTTCAGGCTACAGTGAACAAGCTGCGCTTT
CCATCTTTGAGAAACAATTAAAGCATAATCGATATACCTTCAAAAGTGCTGCTGAATATGGCAAGGCATTGGCGCTATTT
AGATTAAATAAATATGCAGAGTCAGAAAAAATTATTGATGAGCTGTTAGCCGAGAGCCCGAATAATCTGTTTTTTATTGA
TACTAAAACGGATCTCCTCAATCAAAGGGGAGCAAACAAGGACGCAATTAGCCTTTTATTGGCGCAAAAACAGCTAAAAC
CAACGTCTCCGGTCGTGAATACCAATCTCGCCAATATCTACCTTGAAGATAATCAGGTGAATAAGGCAATTCCATTACTA
GAGGACTTAATTTTCCTCGATAAACAAGACCAACTCGCTTACATATTGTTAAATGAGGCTTACAAGAAAAACGGCAATAA
GACGATGGAGCACTTTGTTAAGGCAGAGTCATTAGCACTGATTGCCGATTATAAAACGGCTATTGATCAGCTCAATTTTG
CATACCAAGAAGCTAAGGGTGACGCTTTACAGCTTGCTCGAATTGAAGCCCGAATCAGACAGTTTAGACAAGCAGATAGA
GCATTGGAACAGCTATAA

Upstream 100 bases:

>100_bases
TATAACCAATCTAAGACTATTATCCTAATAAGCGACGCAAACCACAAGCAAGCATTGTGACTAGGTGATAACAGAAGCAT
AGCCCAAATTAAGGATCCGC

Downstream 100 bases:

>100_bases
TACCCTCAGCTAATTTGTGACTCTGGTCACAAATTAGCGTATCATATACACAAAATTTAATAACAATAAAATAACTATGC
CAAAAGTAAGTATTTATCAT

Product: peptidase M48 Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MSKLTLSKSVIAGALSFILCTSSPVSYANNDLPDLGTAAVNTFSLEKETQVGDAYMRVIRGSAPMLNDPVLNQYLTELGN
KLVANATGVKTPFYFFLLRNDEINAFAFFGGHVGVHTGLFLNADTESELASVIGHEITHVTQRHLARSIEAQQKTSPATI
AGMLGAILLTIASPQAGMAALATTQALATQSKINYTRLHEKEADRIGMQVMVDAGFDPNGAADFFGKLATRYRFTTKPPQ
MLLTHPLPESRISEARIRAERYPLRHIPDNLNFQLAKARIQVRFSGYSEQAALSIFEKQLKHNRYTFKSAAEYGKALALF
RLNKYAESEKIIDELLAESPNNLFFIDTKTDLLNQRGANKDAISLLLAQKQLKPTSPVVNTNLANIYLEDNQVNKAIPLL
EDLIFLDKQDQLAYILLNEAYKKNGNKTMEHFVKAESLALIADYKTAIDQLNFAYQEAKGDALQLARIEARIRQFRQADR
ALEQL

Sequences:

>Translated_485_residues
MSKLTLSKSVIAGALSFILCTSSPVSYANNDLPDLGTAAVNTFSLEKETQVGDAYMRVIRGSAPMLNDPVLNQYLTELGN
KLVANATGVKTPFYFFLLRNDEINAFAFFGGHVGVHTGLFLNADTESELASVIGHEITHVTQRHLARSIEAQQKTSPATI
AGMLGAILLTIASPQAGMAALATTQALATQSKINYTRLHEKEADRIGMQVMVDAGFDPNGAADFFGKLATRYRFTTKPPQ
MLLTHPLPESRISEARIRAERYPLRHIPDNLNFQLAKARIQVRFSGYSEQAALSIFEKQLKHNRYTFKSAAEYGKALALF
RLNKYAESEKIIDELLAESPNNLFFIDTKTDLLNQRGANKDAISLLLAQKQLKPTSPVVNTNLANIYLEDNQVNKAIPLL
EDLIFLDKQDQLAYILLNEAYKKNGNKTMEHFVKAESLALIADYKTAIDQLNFAYQEAKGDALQLARIEARIRQFRQADR
ALEQL
>Mature_484_residues
SKLTLSKSVIAGALSFILCTSSPVSYANNDLPDLGTAAVNTFSLEKETQVGDAYMRVIRGSAPMLNDPVLNQYLTELGNK
LVANATGVKTPFYFFLLRNDEINAFAFFGGHVGVHTGLFLNADTESELASVIGHEITHVTQRHLARSIEAQQKTSPATIA
GMLGAILLTIASPQAGMAALATTQALATQSKINYTRLHEKEADRIGMQVMVDAGFDPNGAADFFGKLATRYRFTTKPPQM
LLTHPLPESRISEARIRAERYPLRHIPDNLNFQLAKARIQVRFSGYSEQAALSIFEKQLKHNRYTFKSAAEYGKALALFR
LNKYAESEKIIDELLAESPNNLFFIDTKTDLLNQRGANKDAISLLLAQKQLKPTSPVVNTNLANIYLEDNQVNKAIPLLE
DLIFLDKQDQLAYILLNEAYKKNGNKTMEHFVKAESLALIADYKTAIDQLNFAYQEAKGDALQLARIEARIRQFRQADRA
LEQL

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=475, Percent_Identity=44.421052631579, Blast_Score=374, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 53875; Mature: 53744

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLTLSKSVIAGALSFILCTSSPVSYANNDLPDLGTAAVNTFSLEKETQVGDAYMRVIR
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHEEECCCHHHHHHHHHHHHH
GSAPMLNDPVLNQYLTELGNKLVANATGVKTPFYFFLLRNDEINAFAFFGGHVGVHTGLF
CCCCCCCCHHHHHHHHHHCHHHCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEE
LNADTESELASVIGHEITHVTQRHLARSIEAQQKTSPATIAGMLGAILLTIASPQAGMAA
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHH
LATTQALATQSKINYTRLHEKEADRIGMQVMVDAGFDPNGAADFFGKLATRYRFTTKPPQ
HHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHEEECCCCCH
MLLTHPLPESRISEARIRAERYPLRHIPDNLNFQLAKARIQVRFSGYSEQAALSIFEKQL
HEEECCCCHHHHHHHHHHHHHCCHHCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHH
KHNRYTFKSAAEYGKALALFRLNKYAESEKIIDELLAESPNNLFFIDTKTDLLNQRGANK
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCH
DAISLLLAQKQLKPTSPVVNTNLANIYLEDNQVNKAIPLLEDLIFLDKQDQLAYILLNEA
HHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEHH
YKKNGNKTMEHFVKAESLALIADYKTAIDQLNFAYQEAKGDALQLARIEARIRQFRQADR
HHCCCCHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ALEQL
HHHCC
>Mature Secondary Structure 
SKLTLSKSVIAGALSFILCTSSPVSYANNDLPDLGTAAVNTFSLEKETQVGDAYMRVIR
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHEEECCCHHHHHHHHHHHHH
GSAPMLNDPVLNQYLTELGNKLVANATGVKTPFYFFLLRNDEINAFAFFGGHVGVHTGLF
CCCCCCCCHHHHHHHHHHCHHHCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEE
LNADTESELASVIGHEITHVTQRHLARSIEAQQKTSPATIAGMLGAILLTIASPQAGMAA
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHH
LATTQALATQSKINYTRLHEKEADRIGMQVMVDAGFDPNGAADFFGKLATRYRFTTKPPQ
HHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHEEECCCCCH
MLLTHPLPESRISEARIRAERYPLRHIPDNLNFQLAKARIQVRFSGYSEQAALSIFEKQL
HEEECCCCHHHHHHHHHHHHHCCHHCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHH
KHNRYTFKSAAEYGKALALFRLNKYAESEKIIDELLAESPNNLFFIDTKTDLLNQRGANK
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCH
DAISLLLAQKQLKPTSPVVNTNLANIYLEDNQVNKAIPLLEDLIFLDKQDQLAYILLNEA
HHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEHH
YKKNGNKTMEHFVKAESLALIADYKTAIDQLNFAYQEAKGDALQLARIEARIRQFRQADR
HHCCCCHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ALEQL
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]