| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167624207
Identifier: 167624207
GI number: 167624207
Start: 2766054
End: 2767376
Strand: Reverse
Name: 167624207
Synonym: Shal_2283
Alternate gene names: NA
Gene position: 2767376-2766054 (Counterclockwise)
Preceding gene: 167624208
Following gene: 167624206
Centisome position: 52.94
GC content: 42.03
Gene sequence:
>1323_bases ATGAATATAACTAGAAAGGAGCAGGTTCCTGAATCTATGACTCAAAATGGCCCTGTTCTGCAAACGGAGTCGCTACTCGC ACCACGCCCTAAAACAATCAAAGAAACAGGTGTTTCGGAGGCCTTACTCCTCGACTTGGTGGCCAAACACCTTTTGTCTG CAGGTGTGCTAACTAAGGAGCAACTTGTTAGCTTGATTGGCGTGACGGGTGGCATCATTCAGCATTTATTAGATACCGCA AAAGCCCTAGCTTGGGTCGAAAATAGGCAAACAACTTCTGATGGCCAAATGCGTTACGCTCTTAGCTCCGGCGGTGAGCA CCATGCTAAACAGGCTTTGTCGAGAAATGGTTATTTGGGGTTAGCTCCTGTGCCATTAAAACAGTACGCAAATATTTGTA AAAAGCAGTCGAGCAGGGCTAAGGCGATTACGTTTGAAATGCTCGAAGCAGGCTTATCCGCCTTAGTATTGCCTAAAGAC CTACTGTTTAAAATTGGACCCGCAATGAACTCCAGTAGACCTGTACTTATTTATGGGCCTCCTGGTACCGGTAAAAGCTA TTTGTGTCGCCATTTAAATTTAACCTTAGGCGATAGCGTACTCATCCCATATGCGATTGCGATAGGTAATGAGGTGATTC AAGTTTACGACCCCGAGTTACACCACAAGGTTGGGGTGGGGAATGAAACTAGCAGCCTTAGATTATCGGAAGGGCATGAT CCCAGATGGATTAAGTGTGAAAGGCCTTTACGGATCACCGGAGGAGAATTAACTGCAGAGATGTTAGAGGTTCAATTTGA TAGTCATAGTCGAACTTACATGGCACCACTTCAGTTAAAAGCAAACAACGGAATATTATTATTAGATGATTTAGGTAGGC AGAAAATTAGTGCTAAGCAGTTGTTTAACCGTTGGATTATTCCTATGGAAGAGCGCAGAGACTTTTTAAGTCTTCAATCG GGTGAGCATTTTGAAATTCCTTTCGAACTTATTCTTCTGTTTTCTACTAACCTTAATCCTAAAGAGCTTGTAGATGAGGC GTTTTTAAGACGTCTTGGATATAAAATTCACTTCGATGCCTTGGATGAAGAGCTATATAGAAAGATATGGTTTCAAGTCT GTGAGGATCTAGACTTAAGCTGTACCGAAGAAGTTTTTCAATATCTTTTAGAGGAATATCACAAGCGCTATGAGAAACCA TTAATTCCATGTTATCCACGAGACTTACTGGGAATAATGTCTGATCAAATCAGCTTTATGGAGTTTGAACCCGTAATCAC TCCGTCTTTGGTTGACTCAGCATGGTCGATATATTTTGTCTAA
Upstream 100 bases:
>100_bases GCATTAGCAATTGGTTGGGTATGGGCATGCTCATTAAACCAAGATATTACGCATTTATACACTTCTGTTAGTCACTCTCT ATTTTCTTAGGATATGCGGC
Downstream 100 bases:
>100_bases AATATTTTACGAATTTTGATTAGGAGCGACAAATGAATAACAAAACCGTCCTATTTGTCATTTTATCATTAGTATTTGGT GTTACGGCTGTTTATCTTGC
Product: AAA ATPase
Products: NA
Alternate protein names: ATPase; ATPase With Chaperone Activity; AAA+ Class ATPase With Chaperone Activity; ATPase Central Domain-Containing Protein; Aaa ATPase; ATPase Protein With Chaperone Activity; Chaperone ATPase; AAA Family ATPase; AAA ATPase Central Domain Protein; ATPase Chaperone Activity; ATPase With Chaperone Activity-Like Protein; AAA+ Class ATPase
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MNITRKEQVPESMTQNGPVLQTESLLAPRPKTIKETGVSEALLLDLVAKHLLSAGVLTKEQLVSLIGVTGGIIQHLLDTA KALAWVENRQTTSDGQMRYALSSGGEHHAKQALSRNGYLGLAPVPLKQYANICKKQSSRAKAITFEMLEAGLSALVLPKD LLFKIGPAMNSSRPVLIYGPPGTGKSYLCRHLNLTLGDSVLIPYAIAIGNEVIQVYDPELHHKVGVGNETSSLRLSEGHD PRWIKCERPLRITGGELTAEMLEVQFDSHSRTYMAPLQLKANNGILLLDDLGRQKISAKQLFNRWIIPMEERRDFLSLQS GEHFEIPFELILLFSTNLNPKELVDEAFLRRLGYKIHFDALDEELYRKIWFQVCEDLDLSCTEEVFQYLLEEYHKRYEKP LIPCYPRDLLGIMSDQISFMEFEPVITPSLVDSAWSIYFV
Sequences:
>Translated_440_residues MNITRKEQVPESMTQNGPVLQTESLLAPRPKTIKETGVSEALLLDLVAKHLLSAGVLTKEQLVSLIGVTGGIIQHLLDTA KALAWVENRQTTSDGQMRYALSSGGEHHAKQALSRNGYLGLAPVPLKQYANICKKQSSRAKAITFEMLEAGLSALVLPKD LLFKIGPAMNSSRPVLIYGPPGTGKSYLCRHLNLTLGDSVLIPYAIAIGNEVIQVYDPELHHKVGVGNETSSLRLSEGHD PRWIKCERPLRITGGELTAEMLEVQFDSHSRTYMAPLQLKANNGILLLDDLGRQKISAKQLFNRWIIPMEERRDFLSLQS GEHFEIPFELILLFSTNLNPKELVDEAFLRRLGYKIHFDALDEELYRKIWFQVCEDLDLSCTEEVFQYLLEEYHKRYEKP LIPCYPRDLLGIMSDQISFMEFEPVITPSLVDSAWSIYFV >Mature_440_residues MNITRKEQVPESMTQNGPVLQTESLLAPRPKTIKETGVSEALLLDLVAKHLLSAGVLTKEQLVSLIGVTGGIIQHLLDTA KALAWVENRQTTSDGQMRYALSSGGEHHAKQALSRNGYLGLAPVPLKQYANICKKQSSRAKAITFEMLEAGLSALVLPKD LLFKIGPAMNSSRPVLIYGPPGTGKSYLCRHLNLTLGDSVLIPYAIAIGNEVIQVYDPELHHKVGVGNETSSLRLSEGHD PRWIKCERPLRITGGELTAEMLEVQFDSHSRTYMAPLQLKANNGILLLDDLGRQKISAKQLFNRWIIPMEERRDFLSLQS GEHFEIPFELILLFSTNLNPKELVDEAFLRRLGYKIHFDALDEELYRKIWFQVCEDLDLSCTEEVFQYLLEEYHKRYEKP LIPCYPRDLLGIMSDQISFMEFEPVITPSLVDSAWSIYFV
Specific function: Unknown
COG id: COG0606
COG function: function code O; Predicted ATPase with chaperone activity
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49620; Mature: 49620
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNITRKEQVPESMTQNGPVLQTESLLAPRPKTIKETGVSEALLLDLVAKHLLSAGVLTKE CCCCCHHHCCHHHHCCCCEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCHH QLVSLIGVTGGIIQHLLDTAKALAWVENRQTTSDGQMRYALSSGGEHHAKQALSRNGYLG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCEE LAPVPLKQYANICKKQSSRAKAITFEMLEAGLSALVLPKDLLFKIGPAMNSSRPVLIYGP ECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCHHEEECCHHHHHHHCCCCCCCCCEEEECC PGTGKSYLCRHLNLTLGDSVLIPYAIAIGNEVIQVYDPELHHKVGVGNETSSLRLSEGHD CCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHHCCCCCCCCCEEECCCCC PRWIKCERPLRITGGELTAEMLEVQFDSHSRTYMAPLQLKANNGILLLDDLGRQKISAKQ CCEEEECCCEEEECCHHHHHHHHHEECCCCCEEEEEEEEECCCCEEEEECCCCHHHHHHH LFNRWIIPMEERRDFLSLQSGEHFEIPFELILLFSTNLNPKELVDEAFLRRLGYKIHFDA HHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEHH LDEELYRKIWFQVCEDLDLSCTEEVFQYLLEEYHKRYEKPLIPCYPRDLLGIMSDQISFM HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHE EFEPVITPSLVDSAWSIYFV EECCCCCHHHHHCCEEEEEC >Mature Secondary Structure MNITRKEQVPESMTQNGPVLQTESLLAPRPKTIKETGVSEALLLDLVAKHLLSAGVLTKE CCCCCHHHCCHHHHCCCCEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCHH QLVSLIGVTGGIIQHLLDTAKALAWVENRQTTSDGQMRYALSSGGEHHAKQALSRNGYLG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCEE LAPVPLKQYANICKKQSSRAKAITFEMLEAGLSALVLPKDLLFKIGPAMNSSRPVLIYGP ECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCHHEEECCHHHHHHHCCCCCCCCCEEEECC PGTGKSYLCRHLNLTLGDSVLIPYAIAIGNEVIQVYDPELHHKVGVGNETSSLRLSEGHD CCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHHCCCCCCCCCEEECCCCC PRWIKCERPLRITGGELTAEMLEVQFDSHSRTYMAPLQLKANNGILLLDDLGRQKISAKQ CCEEEECCCEEEECCHHHHHHHHHEECCCCCEEEEEEEEECCCCEEEEECCCCHHHHHHH LFNRWIIPMEERRDFLSLQSGEHFEIPFELILLFSTNLNPKELVDEAFLRRLGYKIHFDA HHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEHH LDEELYRKIWFQVCEDLDLSCTEEVFQYLLEEYHKRYEKPLIPCYPRDLLGIMSDQISFM HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHE EFEPVITPSLVDSAWSIYFV EECCCCCHHHHHCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA