Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624207

Identifier: 167624207

GI number: 167624207

Start: 2766054

End: 2767376

Strand: Reverse

Name: 167624207

Synonym: Shal_2283

Alternate gene names: NA

Gene position: 2767376-2766054 (Counterclockwise)

Preceding gene: 167624208

Following gene: 167624206

Centisome position: 52.94

GC content: 42.03

Gene sequence:

>1323_bases
ATGAATATAACTAGAAAGGAGCAGGTTCCTGAATCTATGACTCAAAATGGCCCTGTTCTGCAAACGGAGTCGCTACTCGC
ACCACGCCCTAAAACAATCAAAGAAACAGGTGTTTCGGAGGCCTTACTCCTCGACTTGGTGGCCAAACACCTTTTGTCTG
CAGGTGTGCTAACTAAGGAGCAACTTGTTAGCTTGATTGGCGTGACGGGTGGCATCATTCAGCATTTATTAGATACCGCA
AAAGCCCTAGCTTGGGTCGAAAATAGGCAAACAACTTCTGATGGCCAAATGCGTTACGCTCTTAGCTCCGGCGGTGAGCA
CCATGCTAAACAGGCTTTGTCGAGAAATGGTTATTTGGGGTTAGCTCCTGTGCCATTAAAACAGTACGCAAATATTTGTA
AAAAGCAGTCGAGCAGGGCTAAGGCGATTACGTTTGAAATGCTCGAAGCAGGCTTATCCGCCTTAGTATTGCCTAAAGAC
CTACTGTTTAAAATTGGACCCGCAATGAACTCCAGTAGACCTGTACTTATTTATGGGCCTCCTGGTACCGGTAAAAGCTA
TTTGTGTCGCCATTTAAATTTAACCTTAGGCGATAGCGTACTCATCCCATATGCGATTGCGATAGGTAATGAGGTGATTC
AAGTTTACGACCCCGAGTTACACCACAAGGTTGGGGTGGGGAATGAAACTAGCAGCCTTAGATTATCGGAAGGGCATGAT
CCCAGATGGATTAAGTGTGAAAGGCCTTTACGGATCACCGGAGGAGAATTAACTGCAGAGATGTTAGAGGTTCAATTTGA
TAGTCATAGTCGAACTTACATGGCACCACTTCAGTTAAAAGCAAACAACGGAATATTATTATTAGATGATTTAGGTAGGC
AGAAAATTAGTGCTAAGCAGTTGTTTAACCGTTGGATTATTCCTATGGAAGAGCGCAGAGACTTTTTAAGTCTTCAATCG
GGTGAGCATTTTGAAATTCCTTTCGAACTTATTCTTCTGTTTTCTACTAACCTTAATCCTAAAGAGCTTGTAGATGAGGC
GTTTTTAAGACGTCTTGGATATAAAATTCACTTCGATGCCTTGGATGAAGAGCTATATAGAAAGATATGGTTTCAAGTCT
GTGAGGATCTAGACTTAAGCTGTACCGAAGAAGTTTTTCAATATCTTTTAGAGGAATATCACAAGCGCTATGAGAAACCA
TTAATTCCATGTTATCCACGAGACTTACTGGGAATAATGTCTGATCAAATCAGCTTTATGGAGTTTGAACCCGTAATCAC
TCCGTCTTTGGTTGACTCAGCATGGTCGATATATTTTGTCTAA

Upstream 100 bases:

>100_bases
GCATTAGCAATTGGTTGGGTATGGGCATGCTCATTAAACCAAGATATTACGCATTTATACACTTCTGTTAGTCACTCTCT
ATTTTCTTAGGATATGCGGC

Downstream 100 bases:

>100_bases
AATATTTTACGAATTTTGATTAGGAGCGACAAATGAATAACAAAACCGTCCTATTTGTCATTTTATCATTAGTATTTGGT
GTTACGGCTGTTTATCTTGC

Product: AAA ATPase

Products: NA

Alternate protein names: ATPase; ATPase With Chaperone Activity; AAA+ Class ATPase With Chaperone Activity; ATPase Central Domain-Containing Protein; Aaa ATPase; ATPase Protein With Chaperone Activity; Chaperone ATPase; AAA Family ATPase; AAA ATPase Central Domain Protein; ATPase Chaperone Activity; ATPase With Chaperone Activity-Like Protein; AAA+ Class ATPase

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MNITRKEQVPESMTQNGPVLQTESLLAPRPKTIKETGVSEALLLDLVAKHLLSAGVLTKEQLVSLIGVTGGIIQHLLDTA
KALAWVENRQTTSDGQMRYALSSGGEHHAKQALSRNGYLGLAPVPLKQYANICKKQSSRAKAITFEMLEAGLSALVLPKD
LLFKIGPAMNSSRPVLIYGPPGTGKSYLCRHLNLTLGDSVLIPYAIAIGNEVIQVYDPELHHKVGVGNETSSLRLSEGHD
PRWIKCERPLRITGGELTAEMLEVQFDSHSRTYMAPLQLKANNGILLLDDLGRQKISAKQLFNRWIIPMEERRDFLSLQS
GEHFEIPFELILLFSTNLNPKELVDEAFLRRLGYKIHFDALDEELYRKIWFQVCEDLDLSCTEEVFQYLLEEYHKRYEKP
LIPCYPRDLLGIMSDQISFMEFEPVITPSLVDSAWSIYFV

Sequences:

>Translated_440_residues
MNITRKEQVPESMTQNGPVLQTESLLAPRPKTIKETGVSEALLLDLVAKHLLSAGVLTKEQLVSLIGVTGGIIQHLLDTA
KALAWVENRQTTSDGQMRYALSSGGEHHAKQALSRNGYLGLAPVPLKQYANICKKQSSRAKAITFEMLEAGLSALVLPKD
LLFKIGPAMNSSRPVLIYGPPGTGKSYLCRHLNLTLGDSVLIPYAIAIGNEVIQVYDPELHHKVGVGNETSSLRLSEGHD
PRWIKCERPLRITGGELTAEMLEVQFDSHSRTYMAPLQLKANNGILLLDDLGRQKISAKQLFNRWIIPMEERRDFLSLQS
GEHFEIPFELILLFSTNLNPKELVDEAFLRRLGYKIHFDALDEELYRKIWFQVCEDLDLSCTEEVFQYLLEEYHKRYEKP
LIPCYPRDLLGIMSDQISFMEFEPVITPSLVDSAWSIYFV
>Mature_440_residues
MNITRKEQVPESMTQNGPVLQTESLLAPRPKTIKETGVSEALLLDLVAKHLLSAGVLTKEQLVSLIGVTGGIIQHLLDTA
KALAWVENRQTTSDGQMRYALSSGGEHHAKQALSRNGYLGLAPVPLKQYANICKKQSSRAKAITFEMLEAGLSALVLPKD
LLFKIGPAMNSSRPVLIYGPPGTGKSYLCRHLNLTLGDSVLIPYAIAIGNEVIQVYDPELHHKVGVGNETSSLRLSEGHD
PRWIKCERPLRITGGELTAEMLEVQFDSHSRTYMAPLQLKANNGILLLDDLGRQKISAKQLFNRWIIPMEERRDFLSLQS
GEHFEIPFELILLFSTNLNPKELVDEAFLRRLGYKIHFDALDEELYRKIWFQVCEDLDLSCTEEVFQYLLEEYHKRYEKP
LIPCYPRDLLGIMSDQISFMEFEPVITPSLVDSAWSIYFV

Specific function: Unknown

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49620; Mature: 49620

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNITRKEQVPESMTQNGPVLQTESLLAPRPKTIKETGVSEALLLDLVAKHLLSAGVLTKE
CCCCCHHHCCHHHHCCCCEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCHH
QLVSLIGVTGGIIQHLLDTAKALAWVENRQTTSDGQMRYALSSGGEHHAKQALSRNGYLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCEE
LAPVPLKQYANICKKQSSRAKAITFEMLEAGLSALVLPKDLLFKIGPAMNSSRPVLIYGP
ECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCHHEEECCHHHHHHHCCCCCCCCCEEEECC
PGTGKSYLCRHLNLTLGDSVLIPYAIAIGNEVIQVYDPELHHKVGVGNETSSLRLSEGHD
CCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHHCCCCCCCCCEEECCCCC
PRWIKCERPLRITGGELTAEMLEVQFDSHSRTYMAPLQLKANNGILLLDDLGRQKISAKQ
CCEEEECCCEEEECCHHHHHHHHHEECCCCCEEEEEEEEECCCCEEEEECCCCHHHHHHH
LFNRWIIPMEERRDFLSLQSGEHFEIPFELILLFSTNLNPKELVDEAFLRRLGYKIHFDA
HHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEHH
LDEELYRKIWFQVCEDLDLSCTEEVFQYLLEEYHKRYEKPLIPCYPRDLLGIMSDQISFM
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHE
EFEPVITPSLVDSAWSIYFV
EECCCCCHHHHHCCEEEEEC
>Mature Secondary Structure
MNITRKEQVPESMTQNGPVLQTESLLAPRPKTIKETGVSEALLLDLVAKHLLSAGVLTKE
CCCCCHHHCCHHHHCCCCEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCHH
QLVSLIGVTGGIIQHLLDTAKALAWVENRQTTSDGQMRYALSSGGEHHAKQALSRNGYLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCEE
LAPVPLKQYANICKKQSSRAKAITFEMLEAGLSALVLPKDLLFKIGPAMNSSRPVLIYGP
ECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCHHEEECCHHHHHHHCCCCCCCCCEEEECC
PGTGKSYLCRHLNLTLGDSVLIPYAIAIGNEVIQVYDPELHHKVGVGNETSSLRLSEGHD
CCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHHCCCCCCCCCEEECCCCC
PRWIKCERPLRITGGELTAEMLEVQFDSHSRTYMAPLQLKANNGILLLDDLGRQKISAKQ
CCEEEECCCEEEECCHHHHHHHHHEECCCCCEEEEEEEEECCCCEEEEECCCCHHHHHHH
LFNRWIIPMEERRDFLSLQSGEHFEIPFELILLFSTNLNPKELVDEAFLRRLGYKIHFDA
HHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEHH
LDEELYRKIWFQVCEDLDLSCTEEVFQYLLEEYHKRYEKPLIPCYPRDLLGIMSDQISFM
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHE
EFEPVITPSLVDSAWSIYFV
EECCCCCHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA