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The map label for this gene is ychE [H]

Identifier: 167624173

GI number: 167624173

Start: 2724737

End: 2725360

Strand: Reverse

Name: ychE [H]

Synonym: Shal_2249

Alternate gene names: 167624173

Gene position: 2725360-2724737 (Counterclockwise)

Preceding gene: 167624175

Following gene: 167624163

Centisome position: 52.14

GC content: 42.63

Gene sequence:

>624_bases
TTGGATTTAACACTCTATGTTAAATTTTTTCTCGGCTTAGTCGCGATAATAAATCCTTTTGGTTTATTACCCGTTTTTGT
CAGCCTAACTAGCCATCAGACTGAACTTGAACGTAATCAAACGGCTAAAGTCGCAAATTTTGCCGTTGTAGTGATTTTGC
TCGTGACGATATTTGCAGGGCAACACATATTAAACCTTTTTAGTATATCGTTGTCCGCATTTAGGATTGCTGGCGGAACC
CTGATTGCTATCATTGCTATGTCGATGCTTCAAGGTAAATTAGGTGAAGTTAAGCGCAACAAAGAAGAGGGGCGAGAAGC
CTCGGCTATGGAATCCGTCGCTGTTGTTCCCTTAGCCTTGCCATTAATGGCAGGTCCAGGTGCGATTAGTTCGGTGATTG
TTTCGTCTGCTGAGCATAACACTCTGCCAGATCTTGTCGGCATGTCACTTGCCATCATAGTGTTCGGTGTTTTGAGTTTT
TTACTGTTTAGAATGGCACCGATAATCTTTAAACTGCTCGGTAACACAGGCATTAACGTGATCACCCGTTTAATGGGTCT
GATCATGTTGTCGATAGGTATTGAAGTGATAGCGGCTGGTGTAAAAGGTTTTTACCCAGGCTAA

Upstream 100 bases:

>100_bases
TGGGATAGAAAATCTCATTTTTTGTTTTTAAGGCCATGAGTTAGAGTAGCGCCACATTTTTATGAACAGATAACGCCTTG
GGCGCGTTGAGGATAAGACG

Downstream 100 bases:

>100_bases
TAACGAGAAGACAGATAGATAAATCTACTCTGTCTTGCTAAAAAAGGCACTCAATGAGTGCCTTTTTTATTGCATTAATC
TAACGAGTTTAAGGTGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MDLTLYVKFFLGLVAIINPFGLLPVFVSLTSHQTELERNQTAKVANFAVVVILLVTIFAGQHILNLFSISLSAFRIAGGT
LIAIIAMSMLQGKLGEVKRNKEEGREASAMESVAVVPLALPLMAGPGAISSVIVSSAEHNTLPDLVGMSLAIIVFGVLSF
LLFRMAPIIFKLLGNTGINVITRLMGLIMLSIGIEVIAAGVKGFYPG

Sequences:

>Translated_207_residues
MDLTLYVKFFLGLVAIINPFGLLPVFVSLTSHQTELERNQTAKVANFAVVVILLVTIFAGQHILNLFSISLSAFRIAGGT
LIAIIAMSMLQGKLGEVKRNKEEGREASAMESVAVVPLALPLMAGPGAISSVIVSSAEHNTLPDLVGMSLAIIVFGVLSF
LLFRMAPIIFKLLGNTGINVITRLMGLIMLSIGIEVIAAGVKGFYPG
>Mature_207_residues
MDLTLYVKFFLGLVAIINPFGLLPVFVSLTSHQTELERNQTAKVANFAVVVILLVTIFAGQHILNLFSISLSAFRIAGGT
LIAIIAMSMLQGKLGEVKRNKEEGREASAMESVAVVPLALPLMAGPGAISSVIVSSAEHNTLPDLVGMSLAIIVFGVLSF
LLFRMAPIIFKLLGNTGINVITRLMGLIMLSIGIEVIAAGVKGFYPG

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=206, Percent_Identity=53.3980582524272, Blast_Score=230, Evalue=6e-62,
Organism=Escherichia coli, GI1787809, Length=194, Percent_Identity=31.9587628865979, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1789842, Length=197, Percent_Identity=28.9340101522843, Blast_Score=81, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 21967; Mature: 21967

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLTLYVKFFLGLVAIINPFGLLPVFVSLTSHQTELERNQTAKVANFAVVVILLVTIFAG
CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QHILNLFSISLSAFRIAGGTLIAIIAMSMLQGKLGEVKRNKEEGREASAMESVAVVPLAL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
PLMAGPGAISSVIVSSAEHNTLPDLVGMSLAIIVFGVLSFLLFRMAPIIFKLLGNTGINV
HHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
ITRLMGLIMLSIGIEVIAAGVKGFYPG
HHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDLTLYVKFFLGLVAIINPFGLLPVFVSLTSHQTELERNQTAKVANFAVVVILLVTIFAG
CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QHILNLFSISLSAFRIAGGTLIAIIAMSMLQGKLGEVKRNKEEGREASAMESVAVVPLAL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
PLMAGPGAISSVIVSSAEHNTLPDLVGMSLAIIVFGVLSFLLFRMAPIIFKLLGNTGINV
HHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
ITRLMGLIMLSIGIEVIAAGVKGFYPG
HHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2015910; 9097039; 9278503 [H]